Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00421 ATGTTGGTATTAGGAACTGCTCACGATCCATCAAGGTACAGTAAGATGAGTATGGAGGAGAAAAGGAATTTGGTCTATGAAATATCGGATCAGCCAAATGCTTCTGATCTGCTTCAGTCCTGGAGTCGTCATGAGATTTTAGAGATCCTGTGTGCAGAGATGGGGAAAGAGAGGAAATATACTGGATTAACAAAACTGAAAATAATTGAGAACCTTCTGAAAATTGTTAGTGAAAAGAAATCAGGGTCATCTGAGGATGTAACAGATCTTGACAGTCAGTCTTCTCCCTGTGTTTATCCAAAGATTACCAAAAGGCAAAGAAAAATTGATCAGCCAGCACGCCTACCTGTTCCTGCAAACCATATTCCAATCAGTAACACTAGGAGTGACTCAAATATTGCAGTATACTGCAGAAATTCGGCATGCAAAGCTACCTTAAATCAAGAGGATAGATTTTGCAAGAGGTGTTCATGCTGCATTTGTTATCAGTATGATGATAATAAGGATCCTAGTCTATGGTTAAGTTGCAGCTCTGACCCACCATTTCAAGACACTTCATGTGGTATGTCATGCCATCTTGAATGTGCATTGAAGCATGAAAAATCTGGGATTTCTAGAGGACTGCGGGCTGGAATGGAAGGGACCTTTTGTTGTTTATCGTGTGGAAAAGTCAATGACTTGCTTGGGTGTTGGAGAAAACAATTGATGAAGGCAAAGGAAACCAGAAGGGTGGATATACTGTGTTACCGCCTCTCTTTAAGCAAAAAGCTTTTGGTTGAAGTTGAAAAGTATCAAGACGTTCATCAGATTGTGGATGAGGCTGTGAAGAAACTTGAAGCTGAAGTGGGTCCTTTGACTGGTGTACCGGTTGGTACGGGCAGGGGCATTGTTAACAGACTTTCTTCAGGACCAGAGGTTCAGAAACTCTGCTCGTTAGCCATTGATACACTGGACTCCTTGCTCTCCACGAATATCTTGCACCAATTGCCCAGTTCCATAATACAAGATACTAATTTGGTTGGTAACAACTTCGTAAGGTTCGAAGATGTTGATGCAACATACCTTACAGTGGTTGTGGGTACTGAGGATGTTTCATCTGGAAAAACTGCTGGTTACAGGATATGGCATCGAAAGGCATGCGAAATAGATTACCCTATGGAGCCAACTTGCACCTTGTCTCAACTCAATTTGAGGTCTGTCGTCCGAGGGCTGACCCCATCTTCGGAATATTATTTCAAAGCCATTTCCTTTGATGGGACAGGAGATTTGGGGATGTGTGAAGTTCAGGTCTCAACTGCTACTGCTCGGGAGGATAACACAGACTGCTTAGTGACTGAAAGGTGTCAGAGTCCTGTGACCAACTTCAGTGAGCTCTCTAATCCTTCTTCAGTAGAAGATGAAACTAACAATGTCATACCTTGTAGCGACCAGACTGACAGTCGAACAGGGAGCTATCTTTCATATTGCAAGGATTCTAACAAGATCACGACGGCTAACCTGTCTAAGGATGCAATAAACTGCACAGATGTCAGTGGAAGGGGAACAGCAAAAGATTCTGTATCATTGTTGGATGAGGATCACGTCACAAGGAAAAGCTCCATGCTGCCTGATCCCAGTGTTTCAAAACTTGAAGAAGGGCATTCCTCTGATGTCCATATCATTGAAGATACCAGCATGAATAACGGGTCAAATTCTGCTATTCAGGAAGGGACTAAATGCGCACCATTTGTTAGCAGCTCTGAGGCTGGATTGCCAGTTACTCCTTGCAAGATGGAAATACTCAAGGATGTTCTTGGAAGGAGTGGTCGATTGAAGTCGTCTAGCGCCAAAGATCGAGAAACTGGGTCGGGAGGAGAGGAACGGCAACATGGCAGAACATCCAAGAAGAGAAGTGCAGAGAGGCAAGATGCTGATTGTGCAGCCAATGGTATCTCAGACAAGGATTTTGAGTATTATGTAAAATTGATTAGATGGCTAGAATGCGAGGGGCACATAGAGAAGAACTTCAGACAAAAATTCTTAACCTGGTACAGCTTGAGAGCCACAGCACAGGATGTTAGGATTGTGAAGGCCTTTGTTGATAACTTCATTGAAGATCCATCAGCCCTTGCCGAGCAACTTGTGGATACCTTTTCAGAATGCATTTCAATCAAGAAAACATGTGCTGTGCCTGCTGGATTCTGCATGAAGCTTTGGCATTGA 2202 43.23 MLVLGTAHDPSRYSKMSMEEKRNLVYEISDQPNASDLLQSWSRHEILEILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGSSEDVTDLDSQSSPCVYPKITKRQRKIDQPARLPVPANHIPISNTRSDSNIAVYCRNSACKATLNQEDRFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQDTSCGMSCHLECALKHEKSGISRGLRAGMEGTFCCLSCGKVNDLLGCWRKQLMKAKETRRVDILCYRLSLSKKLLVEVEKYQDVHQIVDEAVKKLEAEVGPLTGVPVGTGRGIVNRLSSGPEVQKLCSLAIDTLDSLLSTNILHQLPSSIIQDTNLVGNNFVRFEDVDATYLTVVVGTEDVSSGKTAGYRIWHRKACEIDYPMEPTCTLSQLNLRSVVRGLTPSSEYYFKAISFDGTGDLGMCEVQVSTATAREDNTDCLVTERCQSPVTNFSELSNPSSVEDETNNVIPCSDQTDSRTGSYLSYCKDSNKITTANLSKDAINCTDVSGRGTAKDSVSLLDEDHVTRKSSMLPDPSVSKLEEGHSSDVHIIEDTSMNNGSNSAIQEGTKCAPFVSSSEAGLPVTPCKMEILKDVLGRSGRLKSSSAKDRETGSGGEERQHGRTSKKRSAERQDADCAANGISDKDFEYYVKLIRWLECEGHIEKNFRQKFLTWYSLRATAQDVRIVKAFVDNFIEDPSALAEQLVDTFSECISIKKTCAVPAGFCMKLWH 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1924845 1929314 - CmoCh10G004210.1 Cmo10g00421 389767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00421 733 MobiDBLite consensus disorder prediction 605 636 - -
Cmo10g00421 733 MobiDBLite consensus disorder prediction 602 636 - -
Cmo10g00421 733 MobiDBLite consensus disorder prediction 454 476 - -
Cmo10g00421 733 CDD PHD_VIN3_plant 157 221 - -
Cmo10g00421 733 Coils Coil 261 281 - -
Cmo10g00421 733 PANTHER VIN3-LIKE PROTEIN 2-RELATED 5 733 IPR044514 GO:0010048|GO:0040029
Cmo10g00421 733 PANTHER VIN3-LIKE PROTEIN 2-RELATED 5 733 - -
Cmo10g00421 733 Pfam PHD - plant homeodomain finger protein 137 255 IPR032881 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00421 Cmo11g00383 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00421 Cmo-Chr10:1924845 Cmo12g00159 Cmo-Chr12:1030868 7.36E-18 dispersed
Cmo10g00421 Cmo-Chr10:1924845 Cmo11g00383 Cmo-Chr11:1911728 0 wgd
Cmo10g00421 Cmo-Chr10:1924845 Cmo05g00725 Cmo-Chr5:3770367 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00421 - - csv:101220456 1244.18