Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g00434 | ATGGCAGCCCTCCACATTCTTGGCACCGAAACCGATATCTCGGAGGAGTTTTTGATAGCTCGAGTCATCGACCTCCATGGAAGCATCTCGAGGCTTGAAACCCTAAAGCCATGCAAGGAAGTGAACGGCCTCTTCACCAGCCTAGTGAAATTGTGCATTTTGCCTTGTTCAATAGATGTCTCTACATTGGCACCTCATTTACAAGCCATTCGTGAGAGCCTCATACTTTTATGTGGCCGAGCCGAGGGGTTACTCGAGTTAGAATTCTCGACCATGCTCGGAAAAATCCCGAAACCTCTCAACAATCTTACTCTATTTCCATATTATGGCAACTACATCAAATTAGCCCACCTTGAATACAAGATATTGATTGACAATGGAGTTGTGAATCCAAAAAAGGTAGCTTTTGTGGGGTCCGGTCCTCTTCCTCTAACTTCCATTATATTGGCCATGCAGCACATGAAGAACACGTATTTCGACAACTACGACGTCGATAGCATGGCAAATGAGGTGGCGGGAAAGATCGTGGCTTCGGACGGTGAGTTGGAGGGAAGAATGAAGTTTTGGACGAGGGATATTGTTGAGGTAGGAGAAGAGCTTGAGGGATACGATTGTGTGTTCTTGGCAGCTCTTGTGGGGTTGAACAAGGAAGATAAAGTGAAGATTTTAAGTCACTTGAGAAAGTATATGAAACAAGGTGGGGTTTTGGTTGTGAGAAGTGCTAAAGGAGGTCGAGCCTTTTTGTACCCCGTGGTTGAGGTCGCCGATATGGTTGGCTTTGACATTCTCTCGATTTTTCATCCCTCCGACGACGTCGTCAATTCCGTTCTCTTGGCTCGCAAGCCTATACTCCTATGA | 858 | 46.04 | MAALHILGTETDISEEFLIARVIDLHGSISRLETLKPCKEVNGLFTSLVKLCILPCSIDVSTLAPHLQAIRESLILLCGRAEGLLELEFSTMLGKIPKPLNNLTLFPYYGNYIKLAHLEYKILIDNGVVNPKKVAFVGSGPLPLTSIILAMQHMKNTYFDNYDVDSMANEVAGKIVASDGELEGRMKFWTRDIVEVGEELEGYDCVFLAALVGLNKEDKVKILSHLRKYMKQGGVLVVRSAKGGRAFLYPVVEVADMVGFDILSIFHPSDDVVNSVLLARKPILL | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1981529 | 1982386 | + | CmoCh10G004340.1 | Cmo10g00434 | 389780 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g00434 | 285 | Pfam | Nicotianamine synthase protein | 15 | 282 | IPR004298 | GO:0030410|GO:0030418 | |
Cmo10g00434 | 285 | PANTHER | NICOTIANAMINE SYNTHASE | 1 | 283 | - | - | |
Cmo10g00434 | 285 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 127 | 240 | IPR029063 | - | |
Cmo10g00434 | 285 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 11 | 285 | IPR004298 | GO:0030410|GO:0030418 | |
Cmo10g00434 | 285 | Gene3D | Vaccinia Virus protein VP39 | 21 | 282 | IPR029063 | - | |
Cmo10g00434 | 285 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 1 | 283 | IPR004298 | GO:0030410|GO:0030418 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g01085 | Cmo-Chr5:8710688 | Cmo10g00434 | Cmo-Chr10:1981529 | 5.82E-92 | dispersed | |
Cmo10g00434 | Cmo-Chr10:1981529 | Cmo11g01291 | Cmo-Chr11:8760626 | 1.45E-101 | dispersed | |
Cmo10g00434 | Cmo-Chr10:1981529 | Cmo12g01034 | Cmo-Chr12:9648707 | 3.48E-94 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g00434 | K05953 | - | csv:101209464 | 453.751 |