Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00441 ATGCAGAGGAGGTATCCGGAGAGGACGAACTCCATGAGGGAGAAAAGGAGCTTGGAGGGTGGAGAAGATGAGCTGCCAGAGCGAAAGCGACCAGCTCTAGCTAGTGTGATTGTAGAAGCCCTGAAGGTGGATAGTTTACAAAAGCTCTGCTCATCATTGGAACCAATTCTCCGTAGAGTGGTTAGTGAGGAAGTGGAACGTGCTTTGGCTAAGATAGGTCCTGCTAGAATTACTGGAAGGTCTTCTCCTAAAAGGATTGAAGGTCCTGATGGAAGAAACTTGCAACTGCACTTTAGGACTAGATTGTCTCTTCCCCTATTCACTGGAGGGAAAGTGGAAGGTGAACAGGGTGCAACAATCCATGTCGTTCTGGTTGATGCCAACACAGGCCAATTAGTAACGTCTGGTCAGGAAGCCTTGTCTAAATTGGACATTGTGGTACTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACAGAGGAAGAATTTGAAAGCCATGTGGTTAAAGAGCGTGAAGGTAAGAGGCCTCTGTTGACTGGTGACTTGCAGGTTACACTCAAGGAAGGTGTTGGAACACTAGGGGATCTGACCTTCACTGATAATTCAAGTTGGATTAGGAGCAGAAAGTTCAGACTTGGATTAAAGGTGGCTTCAGGTTTTTGTGAAGGTGTACGTATTCGTGAAGCCAAAACTGAAGCTTTTACAGTTAAAGATCACCGAGGAGAACTGTATAAAAAACATTACCCACCTGCATTAAATGATGAGGTGTGGAGATTGGAGAAGATTGGAAAGGATGGTTCATTTCACAAGCGGCTAAACAAAAATCAAATATTCTCAGTTGAAGATTTTCTCCGAATGGTGGTTCGAGATTCTCAAAAGCTACGGAGCATCCTTGGAAGTGGTATGTCAAATAAGATGTGGGATGCTCTCCTGGAACATGCTAAGACCTGTGTCCTGGGCGGGAAGCTGTATATTTATTATCCAGAGGAAACAAGAAATGTTGGTGTTGTTTTCAACAATATCTATGAGCTCAATGGACTGATTACAGGGGAACAATACTTTTCTGCTGATTCTCTGTCTGATAGCCAGAAGGTTTATGTTGATACACTAGTGAACAAAGCATATGAAAATTGGAATCAAGTTGTAGAGTACGATGGCAAGTCACTTTTGAGCTCTAAGCAGTCTAAGAAGTCGAATGCATCCCGAAATGACTTTCAAGGCGGTCATCTTGATCTTTCTAATACTCTAGATCATGGGTCAATCCCCCGCATGCCAGTGTCAGTTCAGCCTCAGCAGCCTGTAATGGATTCAGGACTCTCAGTTGCAGGGTATGATGATAATGCCGCAAGATATTCAACCCAGCCTCAGTTTGTGAATTCAACTTCTCGACCACAGTTTGACAACTCTCAATATGCTTCTAATGAGTTGATTGGCAATTCTAACCAAGTTCATATCTCAAGAAATGACAGTAATGCTTTTGGTTTGGCTCTTGCTCCTCCGCAAGCATCATCTTCAGGGTTCCAGATGCTTGGTTCTTCTATTCAGGAAACTAATCTTAATCCATTTGAATGGTCGAACAATAGAGACAAGGGAGCTGATGACTTCTTTTCAGAGGACGAGATTCGTATGAGAAGTCATGAACTGCTTGAAAATGAAGATATGCAACATTTGTTGCGAATGTTTAGCATGGGAGGGCATGCATCTGGTAACGTCAATGATGAGGGTTTTTCATTCCCATCGTTCATGCCTTCACCAATGCCAAATTTCGACGATCGCAGCCGTTCTGGAAAAGCTGTGGTGGGTTGGCTGAAGATCAAAGCTGCAATGAGGTGGGGCTTCTTCATCAGGAAGAAAGCAGCTGAGAGACGCGCACAGCTTCTTCCTCCTCATTCACTGCATCATCATTCTGTAGATCTTGGAATTCATCACGTGACACAATTCATGCTCTCTGACACTCGCTGGATCAACTCAAAAGGATGTCTTTTGTATCTGTATAACATATTAACAGTGGAAGCTACTTTTGTACAGATTCCTGTACAGTGA 2049 43.29 MQRRYPERTNSMREKRSLEGGEDELPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKIGPARITGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGATIHVVLVDANTGQLVTSGQEALSKLDIVVLEGDFNNEDDEDWTEEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGFCEGVRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKNQIFSVEDFLRMVVRDSQKLRSILGSGMSNKMWDALLEHAKTCVLGGKLYIYYPEETRNVGVVFNNIYELNGLITGEQYFSADSLSDSQKVYVDTLVNKAYENWNQVVEYDGKSLLSSKQSKKSNASRNDFQGGHLDLSNTLDHGSIPRMPVSVQPQQPVMDSGLSVAGYDDNAARYSTQPQFVNSTSRPQFDNSQYASNELIGNSNQVHISRNDSNAFGLALAPPQASSSGFQMLGSSIQETNLNPFEWSNNRDKGADDFFSEDEIRMRSHELLENEDMQHLLRMFSMGGHASGNVNDEGFSFPSFMPSPMPNFDDRSRSGKAVVGWLKIKAAMRWGFFIRKKAAERRAQLLPPHSLHHHSVDLGIHHVTQFMLSDTRWINSKGCLLYLYNILTVEATFVQIPVQ 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1996992 2002411 - CmoCh10G004410.1 Cmo10g00441 389787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00441 682 MobiDBLite consensus disorder prediction 395 418 - -
Cmo10g00441 682 Pfam Calmodulin binding protein C-terminal domain 324 386 IPR046829 -
Cmo10g00441 682 Pfam Calmodulin binding protein central domain 253 319 IPR046830 -
Cmo10g00441 682 PANTHER CALMODULIN-BINDING PROTEIN 60 B 10 628 - -
Cmo10g00441 682 Pfam Calmodulin binding protein-like N-terminal domain 94 241 IPR046831 -
Cmo10g00441 682 MobiDBLite consensus disorder prediction 1 29 - -
Cmo10g00441 682 MobiDBLite consensus disorder prediction 395 412 - -
Cmo10g00441 682 PANTHER OS02G0177800 PROTEIN 10 628 IPR012416 GO:0005516
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00441 Cmo11g00404 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00441 Cmo-Chr10:1996992 Cmo11g00118 Cmo-Chr11:611915 5.52E-107 dispersed
Cmo10g00441 Cmo-Chr10:1996992 Cmo11g00404 Cmo-Chr11:1990248 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00441 - - cmo:103494282 1144.8