Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00476 ATGAAAAAAGAGCGAATGAGAGAGGTGTGTAATTGTTGTAGGGAGACAGAGAAAAAAGAGAGTGGATGCATTCAAATGGCTTTTGCATTTTCACGCTCTTCAGGCAATATGGTCTGCTGCTGCTTTTTCTTTTTTCTGCATTTCTTCGCAGCCATGGTTCCTAAACTCCTCTGTTTGATCATTCTCTCTTCTGCCTTTCTCTGCCTTTCTTATGAACCTCGGAACCCTGAAGTGCAAGCTCTGATCAATTTGAAGACGGCATTGAATGATCCGCACGGCGTGCTCAGCAATTGGGATGAGGACTCGGTGGACCCTTGTAGCTGGGCAATGATCACCTGCTCCCCTGAGAACCTCGTTATAGGACTGGGAGCTCCGAGCCAGTCTCTTTCTGGAAGCTTGTCTGGAGCGATTGGGAACCTCACTAATCTTCGCCAAGTGCTGCTGCAGAACAACAACATTTCCGGTCCAATTCCCATTGAACTTGGAGCTCTCCCGTTGCTGCAAACACTAGATCTCTCTAACAATCGGTTCTCGGGCCCAATACCAGCATCTTTTGCTCAGCTGAATGGTCTACGCTATCTGAGGGTGAACAATAATAGCTTGTCCGGGCCTTTTCCCTCGTCTTTGGCCAAAATTCCCCAGCTTGCTTTCTTGGATTTGTCTTTTAACAATCTCAGTGGACCAGTGCCTGTGTTTCCAGCCAGAACATTCAATGTGGTGGGAAATCCAATGATATGTGGAAATAGTCCTAATGAAGGTTGCTCTGGCTCCGCCAACGCCGTTCCTCTTTCTTTCTCTCTAGAATCAGCCCCTGGAAGACTCAGGTCCAAAAGAATAGCAGTGGCACTTGGGGTCAGCCTCAGCTGTGCGTTTCTGATAATCCTAGCACTTGGAATTCTGTGGCGCAGAAAAACTCAGAAGACTAAAACAATCCTAGACTTCAATGTACACAATCAAGAAGTTGGCCTTATGCGCTTAGGCAACCTCAGAAACTTCACTTTCAAGGAACTCCAGTTAGCAACAGACCATTTTAGTTCCAAAAATATACTTGGGGCTGGAGGCTTTGGTAATGTGTACAAGGGAAAGCTAGGAGATGGGACTATGGTGGCAGTCAAACGGCTAAAAGATATAACGGGTACTACTGGAGAGTCCCAGTTCCGCACAGAATTAGAGATGATTAGTCTTGCAGTTCATCGCAATTTGCTTCGCTTAATTGGTTATTGTGCCACTTCTCACGAGAGGCTCTTGGTGTACCCATACATGTCAAATGGCAGTGTAGCTTCCAGGCTCAGAGGAAAACCAGCCTTAGACTGGAACACGAGGAAGAGAATAGCAATTGGAGCAGCCAGGGGTCTGCTGTACCTCCACGAGCAATGTGATCCTAAGATAATCCATAGAGATGTGAAGGCCGCCAATGTGCTTCTAGATGACTACTGCGAAGCCGTAGTTGGTGATTTTGGACTTGCAAAGCTTCTTGACCATGCTGACTCTCATGTGACCACTGCTGTTCGTGGCACCGTTGGGCACATCGCTCCGGAGTATCTTTCAACTGGCCAGTCTTCTGAGAAGACAGATGTGTTTGGGTTTGGCATTCTTTTGATAGAGCTAATTACTGGAATGCGAGCTCATGAACATGGGAAAACAACTAACCAAAAGGGCGCCATGCTTGAGTGGGTGAAAAAGATACAACAGGAAAAGAAAGTGGAATTGCTTGTGGACAGAGAGCTAGGCAACAACTATGATCAGATTGAAGTTGGGGAAATGTTGCAAGTGGCTCTTCTTTGCACTCAGTATTTACCTGCTCACCGTCCCAAGATGTCGGAGGTGGTCCGAATGCTTGAAGGGGATGGCCTTGTTGAGAAATGGGCTGCTTCCCACACCCATAATGACTTAAATGTCAACCTCTTTCATTCACGGAACAGCTGCAAAAGTTCATACAATCCCACAAATGCAATGAAGAGTAACGGCAATGATCATTCTAGCATGTTAAGTTTGACATTGGACGACGACGACGAGGAGCGATCTTTAGACTCCTATGCCATGGAACTCTCCGGTCCAAGATAG 2064 46.66 MKKERMREVCNCCRETEKKESGCIQMAFAFSRSSGNMVCCCFFFFLHFFAAMVPKLLCLIILSSAFLCLSYEPRNPEVQALINLKTALNDPHGVLSNWDEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGSLSGAIGNLTNLRQVLLQNNNISGPIPIELGALPLLQTLDLSNNRFSGPIPASFAQLNGLRYLRVNNNSLSGPFPSSLAKIPQLAFLDLSFNNLSGPVPVFPARTFNVVGNPMICGNSPNEGCSGSANAVPLSFSLESAPGRLRSKRIAVALGVSLSCAFLIILALGILWRRKTQKTKTILDFNVHNQEVGLMRLGNLRNFTFKELQLATDHFSSKNILGAGGFGNVYKGKLGDGTMVAVKRLKDITGTTGESQFRTELEMISLAVHRNLLRLIGYCATSHERLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLIELITGMRAHEHGKTTNQKGAMLEWVKKIQQEKKVELLVDRELGNNYDQIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLVEKWAASHTHNDLNVNLFHSRNSCKSSYNPTNAMKSNGNDHSSMLSLTLDDDDEERSLDSYAMELSGPR 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2124257 2128990 - CmoCh10G004760.1 Cmo10g00476 389822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00476 687 SMART serkin_6 344 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00476 687 Pfam Leucine rich repeat 166 225 IPR001611 GO:0005515
Cmo10g00476 687 Gene3D Ribonuclease Inhibitor 74 256 IPR032675 -
Cmo10g00476 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Cmo10g00476 687 SUPERFAMILY Protein kinase-like (PK-like) 322 614 IPR011009 -
Cmo10g00476 687 MobiDBLite consensus disorder prediction 646 663 - -
Cmo10g00476 687 ProSiteProfiles Protein kinase domain profile. 344 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00476 687 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 56 687 - -
Cmo10g00476 687 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 56 687 - -
Cmo10g00476 687 CDD TM_EGFR-like 276 309 - -
Cmo10g00476 687 Gene3D Transferase(Phosphotransferase) domain 1 421 632 - -
Cmo10g00476 687 Pfam Protein tyrosine and serine/threonine kinase 347 613 IPR001245 GO:0004672|GO:0006468
Cmo10g00476 687 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Cmo10g00476 687 Gene3D Phosphorylase Kinase; domain 1 314 420 - -
Cmo10g00476 687 Pfam Leucine rich repeat N-terminal domain 75 114 IPR013210 -
Cmo10g00476 687 MobiDBLite consensus disorder prediction 646 687 - -
Cmo10g00476 687 SUPERFAMILY L domain-like 75 239 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00476 Cmo11g00435 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00476 Cmo-Chr10:2124257 Cmo15g00218 Cmo-Chr15:1057861 0 dispersed
Cmo10g00476 Cmo-Chr10:2124257 Cmo11g00435 Cmo-Chr11:2127616 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74607 PF07714 PK_Tyr_Ser-Thr 1.50E-42 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00476 - - cmax:111485761 1275.38