Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g00526 | ATGGCATTTGATCAGAACGCGATTCCCACTGGCTTGCGGCCTTTAAATGTAGCTAGAACTTTAGTTGAAGATCCCCATTTAACGCCGGTTGCTACTGCTGGGCGTAATCCCCAATGGGTTGCCCCCAAGCTTCCCTGCGACATTGCTAACACAGACTCTGTACCCGTTCCTTGTAAGGGAAATGTCTCCGATATGGGATTTATTGAGGGAGGATATGGAAATGTGGTTACTGGCGTTACGGCTTGGTGCCCTCGAATGCCTCCTCCTCTCGCGCACACTGCAATGGTTCCTGCGGCAGGGTTTGGTTACTGCTCGAACCTGAATGCCTGGGGCAATCGTGGTGGTGCCAATGCTATTGAGTTTGCTAGCAGTTGCATGACAGTTGGGATTAATCATAGTACAAATTTGAGTCATCGAGATGGGGGAGGTGGCATGGAATATTCGAGCAATAATATCGTAATGGGGTCTGGGGATAGTACCAATTTATGCAATAAGGTTGCTGCCAACGGTGATCATATCAGTAGTGATAGCACCTCTGGATTTAGCTCCCCCTTGGGGAATTCAGCTGGTGGGAATGCGGTTGATCAAGTGAGAGAGGAGGGGGGAAACAGTTCCGTTCCGAAAAAGAAAGTTAAGTTTATGTGCAGTTTCGGTGGCAAGATTTTTCCAAGACCGAGTGATGGTATGTTGAGATATATTGGAGGTCAAACAAGGATTATAAGTGTTAGAAGAGATGTGACTTTCAATGAGTTTGTGCGAAAGATGGTTGATACCTGTGGGCAGGCTGTGGTTATAAAGTATCAGCTCCCTGATGAGGATCTTGACGCTTTAGTATCTGTTTCATGCCCTGATGATCTTGATAATATGATGGACGAGTATGAGAAGCTGGTTGAGAGGTCTTCAGATGGATCTGCTAAATTGAGGATGTTTTTGTTCTCTGCTTCAGAACTTGACTCTGCAGGTATGGTGCAATTTGGCGACGTACACGATAGTGGGCAGAGATATGTTGAAACAGTGAATACGATATTTGATGGCGTAGGTGGCCGTATTACAAGGAAAGAGAGCTTTACAAGTGCTACCTCAACTCAGAATTCTGACTTAAGTGCGACCGAGGCAATGGATATCTCATATAACGATCTAGGGGTTGTGGGTGAGCCTCCATCCACAACATTGTCCGTACCTGAAGGAAATTTAGGTACTTCAGTTGCTATTGGCCCTGGATTAGTGAAGGTAGATACTGTCTCTGCAGTTTTTGTAGATGCCTCGGCTGTTCCATCAAGTATTCCTGTGATTAACTCTGTTCCTCCTGAAAGTTCTTCCCAGCCAGAGGCGGAGTTAGGAAGGTCGGTGCCTGCTACTCTGATGCAACAGCAACCAGATATTGGCTTTCCTCCACCTGTGCCTCAATTGCAGCCTACTGTTGATCCTCGCCAAGCAGCATGTGTGGACTTTATACAATTTCGTCCACAGCTAGGCTTTTCAAATTCTCATCATCTTGGGACATCTGGGTCTATGTTTATACAACAGCCAAATACTCTTGGAATAACCCCTCATCAGTTTGTCCCTGCAGTTCACATGAGGATGGCTCCCTCTTCTAACCTCAGTATTATGCCTAATACCTATCAATCGTTGGTGCAATATCCACAATCCCAACCGGAATATTTTTCCAACGCAAGCACATCTGGTCCAAGGTTTGTCCAGCTATCTGCAGAACAAGGCTACAACTCACGCCAGATTCCAGCTCCTCCAGTATCAGTGGAGGTTGGATATGGTTTACATCATGTACCATGGTCTGATCAGACAGTTATATCTGATGAATTGGTATCCCAACATCAGGTAACTTTTGCTGACAAAATCAAGAGGTTGGATGACTGTTACCTCTGCCAGAAAGCAGTGCCACATGCTCATTCCAATTCAACGTTGCAGGATAAAAGAGAAAATTTGACAAACCCTGTATCTGATTCAAAATTTTCGTATTACAGTCACCACCCTGAAGATCATTTAGCAGCCCATCCAATGAAAAATATTACAGAAACTGGAGCTTTGGGGCAACAAACTATTGAACATGGTGTTGGAATGCAAACCAGGATATTTAATCCCATGGATCCAGAAGTTGAAAAATCTTCAGTGGAGGCTATTGGCTTCCCACATCATATGGGCAGTCAACATGAGAACGACAACACACTAAAAGATCGACCTAATATTGATCATAGTAAGATCTCAGCTCTGCAGGGTGCTCTTGGGAGGCAAGGTGATTTTCCGTCACCCCATGTTGCTGTTGTAGAACAGATTCCTCAGCCTGGTGAAGTTGATACTCTCCAGCGCCAGTATGCAGCTGTAGAGAATCGGTTCCATCCAAATTTAGACGTGGATAAACACAATATTTGCTTTGGAGGTGCTCCTATTCTTGCTTCAGAGTACAGCAGTCATGAAAATCCAAAGGTTTATTCTAATAGTCCTCATGGCATTATTCCAAATCAAAATGCTACCCACACTGGAATTTGGTACGACCATCTCAGACCAATTGTTGGAAATTTGGAAAGTTTAAGTATATGCCCAACTGATATTTGTCCTAATCTGGATCACTGCAAATCACCCACTGAAAGAACTAGGAAGGAGGACAATTTTGGTAGCTGTTCACAACCAGTCTCTGAGATAAAAGTTCTACTTGATAACAACTCTGTAAAGCCAATAGTGGTTCTCGACACAAATCATGTGAAATCAACTACTTTTGCTTGCTCTTCATCAGAGGTTCCCTATTTGATGAGTGAACGACCTGTTGAGTCCAGTGAAGTGGCACAACCTCCTGTCGGGGGCTATCCTGGAACATTAACACAATCAGAAAATGGGATACAACCTCCTGTTGAGTCCAATAAAGTATGTCTTAGCAGAAATCCCCAGTTATTTGACACGAAGACTGAACATACGAATAATCAAGTCCCAGTTTCTGCTGAGTGGAAGGAGGACACTTCTCTATTTGAATCTAGGATGGTATCTGGTGATGTTGAATCTGAATCTTTGCCTACCAGGACTGGAAATGTGCAGGACACTGCAAATTCACTCTTCAGCAATCAGGATCCTTGGAACTTACAGCATGATGATCATCTTTTGCCTCCTAGACCAAATAAAATTCAACCAGGGAGTGAAGCTGTTACCACCAGGGAACCCTTGACAGAAAGTCCTTTCAGGAATATTGGTGAACTAAAAATGGAAGCATTTATGGATGATGGAGTCTGTCACCCATTGGTTAAGTCAAACAAGGGCTCTTCAGAGGAACAAATTAAGAAAGATCTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCTGTTCTTCAGTCAGCTCAATCCTCCAACTCCGACTTGCATGAAAAAAGTGATTCAGTTTGTGAGATTAGCACAGAAGGAGATGTTCAAAATAATGATGATGTCAGGACAAGACATTCAGAAAAATCAAATCTCGGTTTTCCAATGTCAGAAGGCTTTAGCCACTTGCAGGTAATAAAGAATAGTGACCTTGAAGAACTAAGAGAATTGGGGTCTGGCACCTTTGGCACCGTTTACCATGGAAAATGGAGAGGGACTGATGTTGCTATCAAACGAATCAATGATAGGTGTTTTGCTGGGAAGCCTTCTGAACAAGATCGCATGAGGGAAGATTTTTGGAATGAAGCAAATAAGCTTGCTGATTTGCACCACCCAAATGTGGTTGCTTTTTACGGTATTGTGCTTGATGGTCCTGGAGGCTCTGTGGCAACAGTAACAGAATATATGGTTAATGGCTCGCTCAGAAATGCTTTGTTGAAGAATGAAAAGAGTCTTGACAAGCGTAAGCGCCTCTTGATTGCTATGGATGTGGCTTTTGGTATGGAATACCTGCACAGAAAGAATATAGTGCACTTTGATTTAAAAAGTGATAATCTGCTCGTTAACCTTCGAGATCCTCATCGCCCAATATGCAAGATTCTCATCGCCCAAAATGTTTTGTTTCTCCTTCCAAGAAAAGTACCAGTTTTGAATTTTAAATATAAAATGTTTGGAAGAGCTGGGCTGATGCTGCTGCTATTTGTTGGCGACTTGGGCCTATCCAAGGTGAAACGTCAGACATTGATATCAGGTGGTGTGCGGGGAACACTTCCTTGGATGGCACCCGAGCTTTTGAATGGGAGCAGCAATATGGTGTCCGAGAAGGTTGACGTGTTTTCCTTTGGTATCGTCTTGTGGGAGCTCCTCACTGGAGAAGAACCTTATGCAAATTTGCATTATGGGGTTATCATAGGTGGCATAGTAAGCAACACATTGCGCCCGGAAGTACCGGAATCTTGTGATCCAGAATGGAGGTCACTGATGGAGAGATGCTGGTCATCAGAACTATCAGAGAGGCCAAGCTTCACTGAAATTGCACATGAATTGCGCTCCATGGCTGCTAAGGTTCCCCCGAAAGTACCCAATCAGCAGCAAAGAGACATCCTTCTCTGCTTCAATGAATATTTAGTCCGTGGGGTTTCAGAAAATTAA | 4512 | 43.86 | MAFDQNAIPTGLRPLNVARTLVEDPHLTPVATAGRNPQWVAPKLPCDIANTDSVPVPCKGNVSDMGFIEGGYGNVVTGVTAWCPRMPPPLAHTAMVPAAGFGYCSNLNAWGNRGGANAIEFASSCMTVGINHSTNLSHRDGGGGMEYSSNNIVMGSGDSTNLCNKVAANGDHISSDSTSGFSSPLGNSAGGNAVDQVREEGGNSSVPKKKVKFMCSFGGKIFPRPSDGMLRYIGGQTRIISVRRDVTFNEFVRKMVDTCGQAVVIKYQLPDEDLDALVSVSCPDDLDNMMDEYEKLVERSSDGSAKLRMFLFSASELDSAGMVQFGDVHDSGQRYVETVNTIFDGVGGRITRKESFTSATSTQNSDLSATEAMDISYNDLGVVGEPPSTTLSVPEGNLGTSVAIGPGLVKVDTVSAVFVDASAVPSSIPVINSVPPESSSQPEAELGRSVPATLMQQQPDIGFPPPVPQLQPTVDPRQAACVDFIQFRPQLGFSNSHHLGTSGSMFIQQPNTLGITPHQFVPAVHMRMAPSSNLSIMPNTYQSLVQYPQSQPEYFSNASTSGPRFVQLSAEQGYNSRQIPAPPVSVEVGYGLHHVPWSDQTVISDELVSQHQVTFADKIKRLDDCYLCQKAVPHAHSNSTLQDKRENLTNPVSDSKFSYYSHHPEDHLAAHPMKNITETGALGQQTIEHGVGMQTRIFNPMDPEVEKSSVEAIGFPHHMGSQHENDNTLKDRPNIDHSKISALQGALGRQGDFPSPHVAVVEQIPQPGEVDTLQRQYAAVENRFHPNLDVDKHNICFGGAPILASEYSSHENPKVYSNSPHGIIPNQNATHTGIWYDHLRPIVGNLESLSICPTDICPNLDHCKSPTERTRKEDNFGSCSQPVSEIKVLLDNNSVKPIVVLDTNHVKSTTFACSSSEVPYLMSERPVESSEVAQPPVGGYPGTLTQSENGIQPPVESNKVCLSRNPQLFDTKTEHTNNQVPVSAEWKEDTSLFESRMVSGDVESESLPTRTGNVQDTANSLFSNQDPWNLQHDDHLLPPRPNKIQPGSEAVTTREPLTESPFRNIGELKMEAFMDDGVCHPLVKSNKGSSEEQIKKDLQAVAEGVAASVLQSAQSSNSDLHEKSDSVCEISTEGDVQNNDDVRTRHSEKSNLGFPMSEGFSHLQVIKNSDLEELRELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQDRMREDFWNEANKLADLHHPNVVAFYGIVLDGPGGSVATVTEYMVNGSLRNALLKNEKSLDKRKRLLIAMDVAFGMEYLHRKNIVHFDLKSDNLLVNLRDPHRPICKILIAQNVLFLLPRKVPVLNFKYKMFGRAGLMLLLFVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSNMVSEKVDVFSFGIVLWELLTGEEPYANLHYGVIIGGIVSNTLRPEVPESCDPEWRSLMERCWSSELSERPSFTEIAHELRSMAAKVPPKVPNQQQRDILLCFNEYLVRGVSEN | 1503 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2390091 | 2396993 | - | CmoCh10G005260.1 | Cmo10g00526 | 389872 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g00526 | 1503 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1296 | 1308 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo10g00526 | 1503 | MobiDBLite | consensus disorder prediction | 175 | 205 | - | - | |
Cmo10g00526 | 1503 | SUPERFAMILY | Protein kinase-like (PK-like) | 1161 | 1467 | IPR011009 | - | |
Cmo10g00526 | 1503 | Gene3D | Phosphorylase Kinase; domain 1 | 1164 | 1258 | - | - | |
Cmo10g00526 | 1503 | SUPERFAMILY | CAD & PB1 domains | 226 | 317 | - | - | |
Cmo10g00526 | 1503 | MobiDBLite | consensus disorder prediction | 175 | 190 | - | - | |
Cmo10g00526 | 1503 | Pfam | Protein tyrosine and serine/threonine kinase | 1172 | 1469 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo10g00526 | 1503 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 1355 | 1476 | - | - | |
Cmo10g00526 | 1503 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1259 | 1494 | - | - | |
Cmo10g00526 | 1503 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1177 | 1208 | IPR017441 | GO:0005524 | |
Cmo10g00526 | 1503 | SMART | PB1_new | 225 | 314 | IPR000270 | GO:0005515 | |
Cmo10g00526 | 1503 | CDD | STKc_MAP3K-like | 1177 | 1469 | - | - | |
Cmo10g00526 | 1503 | CDD | PB1_UP2 | 214 | 312 | - | - | |
Cmo10g00526 | 1503 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 166 | 1320 | - | - | |
Cmo10g00526 | 1503 | ProSiteProfiles | Protein kinase domain profile. | 1171 | 1470 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo10g00526 | 1503 | SMART | serkin_6 | 1171 | 1472 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo10g00526 | 1503 | PANTHER | KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN | 1355 | 1476 | - | - | |
Cmo10g00526 | 1503 | PANTHER | KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN | 166 | 1320 | - | - | |
Cmo10g00526 | 1503 | Gene3D | - | 232 | 314 | - | - | |
Cmo10g00526 | 1503 | Pfam | PB1 domain | 230 | 313 | IPR000270 | GO:0005515 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00961 | Cmo-Chr4:4891288 | Cmo10g00526 | Cmo-Chr10:2390091 | 1.31E-33 | dispersed | |
Cmo05g00706 | Cmo-Chr5:3625543 | Cmo10g00526 | Cmo-Chr10:2390091 | 5.13E-19 | dispersed | |
Cmo10g00526 | Cmo-Chr10:2390091 | Cmo20g00304 | Cmo-Chr20:1483839 | 6.18E-34 | dispersed | |
Cmo16g00835 | Cmo-Chr16:4388107 | Cmo10g00526 | Cmo-Chr10:2390091 | 9.67E-34 | dispersed | |
Cmo10g00526 | Cmo-Chr10:2390091 | Cmo18g00250 | Cmo-Chr18:1655442 | 1.94E-31 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74612 | PF07714 | PK_Tyr_Ser-Thr | 1.80E-54 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g00526 | - | - | csv:101203826 | 2358.18 |