Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00526 ATGGCATTTGATCAGAACGCGATTCCCACTGGCTTGCGGCCTTTAAATGTAGCTAGAACTTTAGTTGAAGATCCCCATTTAACGCCGGTTGCTACTGCTGGGCGTAATCCCCAATGGGTTGCCCCCAAGCTTCCCTGCGACATTGCTAACACAGACTCTGTACCCGTTCCTTGTAAGGGAAATGTCTCCGATATGGGATTTATTGAGGGAGGATATGGAAATGTGGTTACTGGCGTTACGGCTTGGTGCCCTCGAATGCCTCCTCCTCTCGCGCACACTGCAATGGTTCCTGCGGCAGGGTTTGGTTACTGCTCGAACCTGAATGCCTGGGGCAATCGTGGTGGTGCCAATGCTATTGAGTTTGCTAGCAGTTGCATGACAGTTGGGATTAATCATAGTACAAATTTGAGTCATCGAGATGGGGGAGGTGGCATGGAATATTCGAGCAATAATATCGTAATGGGGTCTGGGGATAGTACCAATTTATGCAATAAGGTTGCTGCCAACGGTGATCATATCAGTAGTGATAGCACCTCTGGATTTAGCTCCCCCTTGGGGAATTCAGCTGGTGGGAATGCGGTTGATCAAGTGAGAGAGGAGGGGGGAAACAGTTCCGTTCCGAAAAAGAAAGTTAAGTTTATGTGCAGTTTCGGTGGCAAGATTTTTCCAAGACCGAGTGATGGTATGTTGAGATATATTGGAGGTCAAACAAGGATTATAAGTGTTAGAAGAGATGTGACTTTCAATGAGTTTGTGCGAAAGATGGTTGATACCTGTGGGCAGGCTGTGGTTATAAAGTATCAGCTCCCTGATGAGGATCTTGACGCTTTAGTATCTGTTTCATGCCCTGATGATCTTGATAATATGATGGACGAGTATGAGAAGCTGGTTGAGAGGTCTTCAGATGGATCTGCTAAATTGAGGATGTTTTTGTTCTCTGCTTCAGAACTTGACTCTGCAGGTATGGTGCAATTTGGCGACGTACACGATAGTGGGCAGAGATATGTTGAAACAGTGAATACGATATTTGATGGCGTAGGTGGCCGTATTACAAGGAAAGAGAGCTTTACAAGTGCTACCTCAACTCAGAATTCTGACTTAAGTGCGACCGAGGCAATGGATATCTCATATAACGATCTAGGGGTTGTGGGTGAGCCTCCATCCACAACATTGTCCGTACCTGAAGGAAATTTAGGTACTTCAGTTGCTATTGGCCCTGGATTAGTGAAGGTAGATACTGTCTCTGCAGTTTTTGTAGATGCCTCGGCTGTTCCATCAAGTATTCCTGTGATTAACTCTGTTCCTCCTGAAAGTTCTTCCCAGCCAGAGGCGGAGTTAGGAAGGTCGGTGCCTGCTACTCTGATGCAACAGCAACCAGATATTGGCTTTCCTCCACCTGTGCCTCAATTGCAGCCTACTGTTGATCCTCGCCAAGCAGCATGTGTGGACTTTATACAATTTCGTCCACAGCTAGGCTTTTCAAATTCTCATCATCTTGGGACATCTGGGTCTATGTTTATACAACAGCCAAATACTCTTGGAATAACCCCTCATCAGTTTGTCCCTGCAGTTCACATGAGGATGGCTCCCTCTTCTAACCTCAGTATTATGCCTAATACCTATCAATCGTTGGTGCAATATCCACAATCCCAACCGGAATATTTTTCCAACGCAAGCACATCTGGTCCAAGGTTTGTCCAGCTATCTGCAGAACAAGGCTACAACTCACGCCAGATTCCAGCTCCTCCAGTATCAGTGGAGGTTGGATATGGTTTACATCATGTACCATGGTCTGATCAGACAGTTATATCTGATGAATTGGTATCCCAACATCAGGTAACTTTTGCTGACAAAATCAAGAGGTTGGATGACTGTTACCTCTGCCAGAAAGCAGTGCCACATGCTCATTCCAATTCAACGTTGCAGGATAAAAGAGAAAATTTGACAAACCCTGTATCTGATTCAAAATTTTCGTATTACAGTCACCACCCTGAAGATCATTTAGCAGCCCATCCAATGAAAAATATTACAGAAACTGGAGCTTTGGGGCAACAAACTATTGAACATGGTGTTGGAATGCAAACCAGGATATTTAATCCCATGGATCCAGAAGTTGAAAAATCTTCAGTGGAGGCTATTGGCTTCCCACATCATATGGGCAGTCAACATGAGAACGACAACACACTAAAAGATCGACCTAATATTGATCATAGTAAGATCTCAGCTCTGCAGGGTGCTCTTGGGAGGCAAGGTGATTTTCCGTCACCCCATGTTGCTGTTGTAGAACAGATTCCTCAGCCTGGTGAAGTTGATACTCTCCAGCGCCAGTATGCAGCTGTAGAGAATCGGTTCCATCCAAATTTAGACGTGGATAAACACAATATTTGCTTTGGAGGTGCTCCTATTCTTGCTTCAGAGTACAGCAGTCATGAAAATCCAAAGGTTTATTCTAATAGTCCTCATGGCATTATTCCAAATCAAAATGCTACCCACACTGGAATTTGGTACGACCATCTCAGACCAATTGTTGGAAATTTGGAAAGTTTAAGTATATGCCCAACTGATATTTGTCCTAATCTGGATCACTGCAAATCACCCACTGAAAGAACTAGGAAGGAGGACAATTTTGGTAGCTGTTCACAACCAGTCTCTGAGATAAAAGTTCTACTTGATAACAACTCTGTAAAGCCAATAGTGGTTCTCGACACAAATCATGTGAAATCAACTACTTTTGCTTGCTCTTCATCAGAGGTTCCCTATTTGATGAGTGAACGACCTGTTGAGTCCAGTGAAGTGGCACAACCTCCTGTCGGGGGCTATCCTGGAACATTAACACAATCAGAAAATGGGATACAACCTCCTGTTGAGTCCAATAAAGTATGTCTTAGCAGAAATCCCCAGTTATTTGACACGAAGACTGAACATACGAATAATCAAGTCCCAGTTTCTGCTGAGTGGAAGGAGGACACTTCTCTATTTGAATCTAGGATGGTATCTGGTGATGTTGAATCTGAATCTTTGCCTACCAGGACTGGAAATGTGCAGGACACTGCAAATTCACTCTTCAGCAATCAGGATCCTTGGAACTTACAGCATGATGATCATCTTTTGCCTCCTAGACCAAATAAAATTCAACCAGGGAGTGAAGCTGTTACCACCAGGGAACCCTTGACAGAAAGTCCTTTCAGGAATATTGGTGAACTAAAAATGGAAGCATTTATGGATGATGGAGTCTGTCACCCATTGGTTAAGTCAAACAAGGGCTCTTCAGAGGAACAAATTAAGAAAGATCTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCTGTTCTTCAGTCAGCTCAATCCTCCAACTCCGACTTGCATGAAAAAAGTGATTCAGTTTGTGAGATTAGCACAGAAGGAGATGTTCAAAATAATGATGATGTCAGGACAAGACATTCAGAAAAATCAAATCTCGGTTTTCCAATGTCAGAAGGCTTTAGCCACTTGCAGGTAATAAAGAATAGTGACCTTGAAGAACTAAGAGAATTGGGGTCTGGCACCTTTGGCACCGTTTACCATGGAAAATGGAGAGGGACTGATGTTGCTATCAAACGAATCAATGATAGGTGTTTTGCTGGGAAGCCTTCTGAACAAGATCGCATGAGGGAAGATTTTTGGAATGAAGCAAATAAGCTTGCTGATTTGCACCACCCAAATGTGGTTGCTTTTTACGGTATTGTGCTTGATGGTCCTGGAGGCTCTGTGGCAACAGTAACAGAATATATGGTTAATGGCTCGCTCAGAAATGCTTTGTTGAAGAATGAAAAGAGTCTTGACAAGCGTAAGCGCCTCTTGATTGCTATGGATGTGGCTTTTGGTATGGAATACCTGCACAGAAAGAATATAGTGCACTTTGATTTAAAAAGTGATAATCTGCTCGTTAACCTTCGAGATCCTCATCGCCCAATATGCAAGATTCTCATCGCCCAAAATGTTTTGTTTCTCCTTCCAAGAAAAGTACCAGTTTTGAATTTTAAATATAAAATGTTTGGAAGAGCTGGGCTGATGCTGCTGCTATTTGTTGGCGACTTGGGCCTATCCAAGGTGAAACGTCAGACATTGATATCAGGTGGTGTGCGGGGAACACTTCCTTGGATGGCACCCGAGCTTTTGAATGGGAGCAGCAATATGGTGTCCGAGAAGGTTGACGTGTTTTCCTTTGGTATCGTCTTGTGGGAGCTCCTCACTGGAGAAGAACCTTATGCAAATTTGCATTATGGGGTTATCATAGGTGGCATAGTAAGCAACACATTGCGCCCGGAAGTACCGGAATCTTGTGATCCAGAATGGAGGTCACTGATGGAGAGATGCTGGTCATCAGAACTATCAGAGAGGCCAAGCTTCACTGAAATTGCACATGAATTGCGCTCCATGGCTGCTAAGGTTCCCCCGAAAGTACCCAATCAGCAGCAAAGAGACATCCTTCTCTGCTTCAATGAATATTTAGTCCGTGGGGTTTCAGAAAATTAA 4512 43.86 MAFDQNAIPTGLRPLNVARTLVEDPHLTPVATAGRNPQWVAPKLPCDIANTDSVPVPCKGNVSDMGFIEGGYGNVVTGVTAWCPRMPPPLAHTAMVPAAGFGYCSNLNAWGNRGGANAIEFASSCMTVGINHSTNLSHRDGGGGMEYSSNNIVMGSGDSTNLCNKVAANGDHISSDSTSGFSSPLGNSAGGNAVDQVREEGGNSSVPKKKVKFMCSFGGKIFPRPSDGMLRYIGGQTRIISVRRDVTFNEFVRKMVDTCGQAVVIKYQLPDEDLDALVSVSCPDDLDNMMDEYEKLVERSSDGSAKLRMFLFSASELDSAGMVQFGDVHDSGQRYVETVNTIFDGVGGRITRKESFTSATSTQNSDLSATEAMDISYNDLGVVGEPPSTTLSVPEGNLGTSVAIGPGLVKVDTVSAVFVDASAVPSSIPVINSVPPESSSQPEAELGRSVPATLMQQQPDIGFPPPVPQLQPTVDPRQAACVDFIQFRPQLGFSNSHHLGTSGSMFIQQPNTLGITPHQFVPAVHMRMAPSSNLSIMPNTYQSLVQYPQSQPEYFSNASTSGPRFVQLSAEQGYNSRQIPAPPVSVEVGYGLHHVPWSDQTVISDELVSQHQVTFADKIKRLDDCYLCQKAVPHAHSNSTLQDKRENLTNPVSDSKFSYYSHHPEDHLAAHPMKNITETGALGQQTIEHGVGMQTRIFNPMDPEVEKSSVEAIGFPHHMGSQHENDNTLKDRPNIDHSKISALQGALGRQGDFPSPHVAVVEQIPQPGEVDTLQRQYAAVENRFHPNLDVDKHNICFGGAPILASEYSSHENPKVYSNSPHGIIPNQNATHTGIWYDHLRPIVGNLESLSICPTDICPNLDHCKSPTERTRKEDNFGSCSQPVSEIKVLLDNNSVKPIVVLDTNHVKSTTFACSSSEVPYLMSERPVESSEVAQPPVGGYPGTLTQSENGIQPPVESNKVCLSRNPQLFDTKTEHTNNQVPVSAEWKEDTSLFESRMVSGDVESESLPTRTGNVQDTANSLFSNQDPWNLQHDDHLLPPRPNKIQPGSEAVTTREPLTESPFRNIGELKMEAFMDDGVCHPLVKSNKGSSEEQIKKDLQAVAEGVAASVLQSAQSSNSDLHEKSDSVCEISTEGDVQNNDDVRTRHSEKSNLGFPMSEGFSHLQVIKNSDLEELRELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQDRMREDFWNEANKLADLHHPNVVAFYGIVLDGPGGSVATVTEYMVNGSLRNALLKNEKSLDKRKRLLIAMDVAFGMEYLHRKNIVHFDLKSDNLLVNLRDPHRPICKILIAQNVLFLLPRKVPVLNFKYKMFGRAGLMLLLFVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSNMVSEKVDVFSFGIVLWELLTGEEPYANLHYGVIIGGIVSNTLRPEVPESCDPEWRSLMERCWSSELSERPSFTEIAHELRSMAAKVPPKVPNQQQRDILLCFNEYLVRGVSEN 1503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2390091 2396993 - CmoCh10G005260.1 Cmo10g00526 389872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00526 1503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1296 1308 IPR008271 GO:0004672|GO:0006468
Cmo10g00526 1503 MobiDBLite consensus disorder prediction 175 205 - -
Cmo10g00526 1503 SUPERFAMILY Protein kinase-like (PK-like) 1161 1467 IPR011009 -
Cmo10g00526 1503 Gene3D Phosphorylase Kinase; domain 1 1164 1258 - -
Cmo10g00526 1503 SUPERFAMILY CAD & PB1 domains 226 317 - -
Cmo10g00526 1503 MobiDBLite consensus disorder prediction 175 190 - -
Cmo10g00526 1503 Pfam Protein tyrosine and serine/threonine kinase 1172 1469 IPR001245 GO:0004672|GO:0006468
Cmo10g00526 1503 PANTHER SERINE-THREONINE PROTEIN KINASE 1355 1476 - -
Cmo10g00526 1503 Gene3D Transferase(Phosphotransferase) domain 1 1259 1494 - -
Cmo10g00526 1503 ProSitePatterns Protein kinases ATP-binding region signature. 1177 1208 IPR017441 GO:0005524
Cmo10g00526 1503 SMART PB1_new 225 314 IPR000270 GO:0005515
Cmo10g00526 1503 CDD STKc_MAP3K-like 1177 1469 - -
Cmo10g00526 1503 CDD PB1_UP2 214 312 - -
Cmo10g00526 1503 PANTHER SERINE-THREONINE PROTEIN KINASE 166 1320 - -
Cmo10g00526 1503 ProSiteProfiles Protein kinase domain profile. 1171 1470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00526 1503 SMART serkin_6 1171 1472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00526 1503 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 1355 1476 - -
Cmo10g00526 1503 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 166 1320 - -
Cmo10g00526 1503 Gene3D - 232 314 - -
Cmo10g00526 1503 Pfam PB1 domain 230 313 IPR000270 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00961 Cmo-Chr4:4891288 Cmo10g00526 Cmo-Chr10:2390091 1.31E-33 dispersed
Cmo05g00706 Cmo-Chr5:3625543 Cmo10g00526 Cmo-Chr10:2390091 5.13E-19 dispersed
Cmo10g00526 Cmo-Chr10:2390091 Cmo20g00304 Cmo-Chr20:1483839 6.18E-34 dispersed
Cmo16g00835 Cmo-Chr16:4388107 Cmo10g00526 Cmo-Chr10:2390091 9.67E-34 dispersed
Cmo10g00526 Cmo-Chr10:2390091 Cmo18g00250 Cmo-Chr18:1655442 1.94E-31 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74612 PF07714 PK_Tyr_Ser-Thr 1.80E-54 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00526 - - csv:101203826 2358.18