Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00547 ATGGGCGTCGTCACCATTCTTCCAGATCTCGGCACTCAGATTTTCATCCCGGTCTGTGCTGTAGTAGGAATAGTCTTCTCTTTGGTGCAGTGGTACTATGTCTCTCAGGTTAAGCTGTCGCCTAGTCGAGATTCCACTCATAACAACTCCGCCGCTGCTAAAAATGGCTACTCCGACTACCTTATCGAGGAGGAAGAAGGAGTCAACGACCATAACGTTGTTATTAAGTGTGCCGAAATTCAGAATGCTATCTCTGAGGGGGCAACCTCCTTCCTGTTCACGGAGTACAAGTATGTTGGCATCTTTATGGTGTTGTTTGCAGTCTTGATTTTCGTGTTCCTTGGCTCAGTGGAGGGTTTTAGTACCGAGCCTCAAGCGTGCACTTATGACAAAACAAAGATTTGCAAGCCCGCTTTGGCGACAGCTATATTCAGCACTATATCATTTTTACTTGGTGCAGTTACTTCAGTGGTTTCTGGTTTCCTTGGAATGAAAATTGCTACATATGCAAATGCCAGAACCACCTTGGAGGCAAGAAAAGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTCCTCCTAGCTGCCAATGGTCTCTTGGTTTTGTTTATTGCCATTAACGTCTTCAAGTTGTACTATGGCGAAGATTGGGGTGGCCTTTTTGAGTCTATCACTGGGTATGGTCTTGGTGGATCTTCGATGGCTCTCTTTGGTAGAGTTGGTGGTGGTATCTACACTAAAGCTGCTGATGTTGGTGCTGACCTTGTGGGCAAGGTGGAAAGGAATATTCCTGAGGATGATCCAAGAAACCCAGCTGTCATTGCTGATAATGTCGGTGACAATGTTGGGGATATTGCTGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAATCATCCTGTGCTGCTCTTGTTGTTGCTTCTATCTCTTCTTTTGGCAACAACCATGAGCTGACACCAATGCTCTATCCACTCATAGTTAGTTCTGTGGGTATCCTTGTTTGCCTGATCACCACCTTATTTGCTACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTCATAATTTCCACTGTTCTAATGACCTTTGGAATTGCCGTTGTTACTTGGCTAGCTGTTCCATCAACATTCACCATTTTCAATTTTGGAACTCAAAAAGTTGTACAGAACTGGAAACTTTTCTTGTGCGTTGCTGTCGGTCTTTGGGCTGGGCTTATAATAGGATTTGTGACAGAGTACTATACTAGCAATGCGTACAGCCCTGTGCAGGATGTTGCTGATTCCTGCCGAACCGGAGCTGCTACAAATGTTATTTTTGGCTTGGCTTTGGGATACAAATCTGTCATTATCCCCATTTTTGCAATTGCAGTTAGCATTTTTGTTAGTTTCACCTTTGCTGCAATGTACGGCATTGCTGTTGCTGCTCTTGGAATGTTGAGTACAATAGCTACTGGTTTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGCATTGCAGAGATGGCAGGCATGAGCCACAGAATTCGGGAGAGAACCGATGCCCTCGATGCTGCCGGAAACACAACTGCAGCCATTGGAAAGGTATTTTCTTTTATTCTTTTCGTCTCAATTGTAATGTCTGTATTGTTTCTTTATCACAATTTTTGCATGAGAAGCTTGCTTGCAGTCGGTAGTAGCTTATTCTTTATTTGCATTTTCCAGGGTTTTGCCATTGGTTCAGCTGCTCTTGTGTCCCTTGCCCTCTTCGGCGCCTTCGTCAGCCGTGCTGGTGTCACTTCTGTTGACGTCTTGACACCCAAAGTTTTCATTGGCTTGATCGTAGGTGCTATGCTGCCGTACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGGAGTGCAGCCCTAAAGATGGTCGAGGAGGTGCGAAGACAATTCAACACCATCCCAGGTCTCATGGAGGGCACTGCCAAGCCCGACTACGCTACATGTGTCAAGATCTCAACTGATGCTTCTATCAAGGAGATGATCCCACCTGGTGCCCTTGTCATGTTGACACCCCTAATTGTCGGTATCCTATTCGGGGTCGAAACTCTTTCTGGCGTCCTTGCTGGATCTCTTGTTTCTGGCGTTCAGATCGCCATCTCTGCATCCAACACCGGAGGTGCCTGGGATAACGCTAAGAAGTACATCGAGGCTGGTGCCTCTGAGCATGCAAGAACCCTCGGCCCGAAAGGATCAGATCCACACAAAGCCGCTGTTATCGGCGACACGATCGGAGACCCGCTCAAGGACACCTCCGGGCCTTCTCTCAACATTCTCATCAAGCTGATGGCTGTGGAGTCCCTTGTGTTTGCTCCTTTCTTTGCCACTCACGGTGGGCTTCTCTTCAAGCTCTAG 2427 46.48 MGVVTILPDLGTQIFIPVCAVVGIVFSLVQWYYVSQVKLSPSRDSTHNNSAAAKNGYSDYLIEEEEGVNDHNVVIKCAEIQNAISEGATSFLFTEYKYVGIFMVLFAVLIFVFLGSVEGFSTEPQACTYDKTKICKPALATAIFSTISFLLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINVFKLYYGEDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHELTPMLYPLIVSSVGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAVVTWLAVPSTFTIFNFGTQKVVQNWKLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKVFSFILFVSIVMSVLFLYHNFCMRSLLAVGSSLFFICIFQGFAIGSAALVSLALFGAFVSRAGVTSVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKL 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2457275 2461656 - CmoCh10G005470.1 Cmo10g00547 389893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00547 808 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 4 570 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo10g00547 808 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 581 808 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo10g00547 808 PIRSF H+-PPtase 11 578 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo10g00547 808 PIRSF H+-PPtase 568 807 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo10g00547 808 Pfam Inorganic H+ pyrophosphatase 583 794 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo10g00547 808 Pfam Inorganic H+ pyrophosphatase 44 568 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo10g00547 808 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 10 799 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cmo10g00547 808 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 581 808 - -
Cmo10g00547 808 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 4 570 - -
Cmo10g00547 808 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 12 565 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00547 Cmo11g00507 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00547 Cmo-Chr10:2457275 Cmo17g00604 Cmo-Chr17:6402349 1.93E-23 dispersed
Cmo10g00547 Cmo-Chr10:2457275 Cmo11g00507 Cmo-Chr11:2436611 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00547 K23025 - csv:101222673 1404.04