Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00567 AAGCAGAAGAAGGCTGAAGAAAAGGGCGGGGAAGGGAAGGGGCAGCAGAAACCCTGGCGCCGCATCACAGCCGCTGGATGTGTCGGGCGGAGTCTTGGCTTCTCTGGTGTTTGCAAATCCTCTGCTTCTAAAGACTCTCCGAACAACATTCCTCGAACCAGCCTAGTTTATGATTCTGCTACTGAAACACGGTGTTTAAATGCTAGCAACAGGGAACTCTCTACCTCGAATGAAGCTGAGCTAGCCTCTGATAATGCCAATCCATCACCATCAGACAACAAATCAACAAGCAAACTACTTCAGTTCTCTTTTCATGAGCTGAAGGCAGCAACAGGAAACTTTAGACCTGATAGCATTCTTGGGGAAGGTGGATTTGGATTTGTCTTTAAAGGATGGATTGAAGAGAATGGGACAGCCCCTGCAAAACCCGGATCAGGAATTACAGTAGCTGTTAAGAGCTTGAAACTAGATGGTCTTCAAGGCCATAGAGAATGGGTGGCTGAGGTTGTCTTTCTTGGACAACTTCACCATCCAAATCTTGTGAAGCTTATAGGTTACTGTAACGAAGATGATCAACATTTGCTTGTTTATGAGTTCATGAGCCGTGGAAGTCTGGAAAACCATCTTTTCAGAAGGATTATTCCTCTTCCATGGTCCAATAGGATTAAGATTGCCCTCAAAGCGGCAAAAGGATTGGCCTTTCTTCATAATGCCCCAGTACCTGTTATCTATAGAGATTTTAAGACATCCAATATCTTGCTTGATTCGGAATACAATGCAAAGCTTTCAGATTTTGGCTTTGCGAAAGCAGGGCCTCAAGGAGACAAAACACATGTTTCTACCAGGGTAATTGGGACGTATGGCTATGCTGCTCCTGAATATGTAATGACAGGACATCTGACGTCGAAGAATGATGTTTATAGCTTTGGTGTTGTGCTTCTTGAGATTGTAACAGGGAGAAGATCCATGGACAAGAAACGTCCGAGTGGGGAGCAAAACCTTGTGTCATGGGCTCGGCCATATTTAGGCGATAAAAGAAAGCTATATCATATAGTGGATCCCCGCTTGGAATTCAAGTATTCCATTAAAGGGGTGCAGAAGGTCTCCCAGCTTGCTTGCAGTTGCCTGAGCAGGGACCCGAAACTACGTCCGACCATGGACGAAGTTGTGAAGACCCTGACTCCGTTGCAAGATCTCAACGACTTTGCCATCCTAACATCTCACTGCCGCTTATCTTCTTCACAAGGGAGGTACAAGAAGAAACCTGAAGGCCTAACCTACTCCCAAAACTTCAGAGCTTCTCCATTGAACATCGGAAAGCAGCATGTAAGGTGA 1335 45.47 KQKKAEEKGGEGKGQQKPWRRITAAGCVGRSLGFSGVCKSSASKDSPNNIPRTSLVYDSATETRCLNASNRELSTSNEAELASDNANPSPSDNKSTSKLLQFSFHELKAATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGITVAVKSLKLDGLQGHREWVAEVVFLGQLHHPNLVKLIGYCNEDDQHLLVYEFMSRGSLENHLFRRIIPLPWSNRIKIALKAAKGLAFLHNAPVPVIYRDFKTSNILLDSEYNAKLSDFGFAKAGPQGDKTHVSTRVIGTYGYAAPEYVMTGHLTSKNDVYSFGVVLLEIVTGRRSMDKKRPSGEQNLVSWARPYLGDKRKLYHIVDPRLEFKYSIKGVQKVSQLACSCLSRDPKLRPTMDEVVKTLTPLQDLNDFAILTSHCRLSSSQGRYKKKPEGLTYSQNFRASPLNIGKQHVR 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2578452 2581538 + CmoCh10G005670.1 Cmo10g00567 389913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00567 444 MobiDBLite consensus disorder prediction 73 95 - -
Cmo10g00567 444 Gene3D Transferase(Phosphotransferase) domain 1 200 408 - -
Cmo10g00567 444 MobiDBLite consensus disorder prediction 1 22 - -
Cmo10g00567 444 SUPERFAMILY Protein kinase-like (PK-like) 96 403 IPR011009 -
Cmo10g00567 444 MobiDBLite consensus disorder prediction 1 15 - -
Cmo10g00567 444 PANTHER OS01G0588500 PROTEIN-RELATED 69 413 - -
Cmo10g00567 444 ProSitePatterns Protein kinases ATP-binding region signature. 120 152 IPR017441 GO:0005524
Cmo10g00567 444 Gene3D Phosphorylase Kinase; domain 1 89 199 - -
Cmo10g00567 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Cmo10g00567 444 CDD STKc_IRAK 120 396 - -
Cmo10g00567 444 Pfam Protein tyrosine and serine/threonine kinase 118 393 IPR001245 GO:0004672|GO:0006468
Cmo10g00567 444 PANTHER OS01G0588500 PROTEIN 69 413 - -
Cmo10g00567 444 ProSiteProfiles Protein kinase domain profile. 114 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00567 Cmo12g01221 CCT
Cmo10g00567 Cmo11g00526 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00567 Cmo-Chr10:2578452 Cmo18g01199 Cmo-Chr18:11991198 1.47E-176 dispersed
Cmo10g00567 Cmo-Chr10:2578452 Cmo11g00526 Cmo-Chr11:2569011 0 wgd
Cmo10g00567 Cmo-Chr10:2578452 Cmo12g01221 Cmo-Chr12:10901190 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74614 PF07714 PK_Tyr_Ser-Thr 1.80E-45 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00567 - - bhj:120071895 768.459