Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00590 ATGGGGCAAACCAAAGCCATTTGGTGGGTTTTTCTGGGAATTCTAGCAATGATTTTGCCTGTAAAAGCTCAGCTGGCTGTTGGGTTTTACTCCAAATCTTGTCCTAGAGCTGAGTCCATTGTCAGGTCCACTGTTCAGTCATATTACAAGGCTGATCCCACCATCGCCGCTGGGTTGCTCAGGCTTCACTTCCATGACTGCTTCGTTCAGGGGTGCGATGGTTCAGTGTTGATCATGGACGAACGAGCTGAAATAAATGCAGGGCCAAACATGGGGTTGAGAGGCTTTGAAGTAGTCGATGATGCAAAAGCTCAGCTTGAAAATCTGTGCCCTGGGGTTGTTTCTTGCGCGGATATACTTGCTTTGGCTACTCGTGATGCTGTAGACTTGAGTGATGGCCCAAGCTGGTCTGTGCCCACTGGAAGAAGGGATGGGAGAGTGTCTATGAGTTTCCAGGCTGAAGATCTTCCTTCTCCATTTGAGCCCATCGATGTCCACATACAAAAGTTCGCTGAGAAAGGGCTTACTGAAGAAGATCTTGTTACTTTAGTTGGTGCGCACACGATCGGACGAACAGACTGCCAACTATTCAGTTACCGGCTACAGAACTTCACAAGCACAGGGAATCCAGACCCAACAATAAACCCATCCTTCTTGACCCAACTCAGAACGCTGTGCCCCTTAGATGGAGATCCATTCAGAGGCGTGGCAATGGACAAGGACAGCCAGTTGAGATTCGACAACAGCTTCTTCAAGAACTTGGTCAATGGAAATGGGGTTTTGGAGTCGGACCAGAGGCTGTGGCAACACGCTTCAACCAAAGACATTGTGCAGAGGTATGCCGGCAACTTAAGGGGCTTGCTCGGCCTCAGATTTAACTATGAGTTCAAGAAAGCCATGGTTAAGCTGAGTAGCCTCGACGTCAAGACCGGCACACAAGGGGAGATTAGAAAACTCTGTTCCCAGTTCAATAACCAGTAA 981 48.62 MGQTKAIWWVFLGILAMILPVKAQLAVGFYSKSCPRAESIVRSTVQSYYKADPTIAAGLLRLHFHDCFVQGCDGSVLIMDERAEINAGPNMGLRGFEVVDDAKAQLENLCPGVVSCADILALATRDAVDLSDGPSWSVPTGRRDGRVSMSFQAEDLPSPFEPIDVHIQKFAEKGLTEEDLVTLVGAHTIGRTDCQLFSYRLQNFTSTGNPDPTINPSFLTQLRTLCPLDGDPFRGVAMDKDSQLRFDNSFFKNLVNGNGVLESDQRLWQHASTKDIVQRYAGNLRGLLGLRFNYEFKKAMVKLSSLDVKTGTQGEIRKLCSQFNNQ 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2674994 2677651 + CmoCh10G005900.1 Cmo10g00590 389936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00590 326 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Cmo10g00590 326 PANTHER PEROXIDASE 10 323 - -
Cmo10g00590 326 Pfam Peroxidase 41 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PANTHER PEROXIDASE 25-RELATED 10 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cmo10g00590 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Cmo10g00590 326 Gene3D Peroxidase, domain 2 157 303 - -
Cmo10g00590 326 Gene3D - 28 324 - -
Cmo10g00590 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo10g00590 326 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00590 Cmo-Chr10:2674994 Cmo19g00284 Cmo-Chr19:2073616 5.11E-125 dispersed
Cmo19g01131 Cmo-Chr19:9580172 Cmo10g00590 Cmo-Chr10:2674994 3.11E-72 dispersed
Cmo10g00590 Cmo-Chr10:2674994 Cmo03g00688 Cmo-Chr3:6034619 1.64E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00590 K00430 - csv:101214998 573.548