Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00614 ATGGGGTTGGTGTTATGGTGGAAGCCAAGAAGGATAGAGAACCACTTTCTCCGGCAAGGAATTGGAGGGCCGCCGTATCGTTTCTTTATTGGTAATTTCAAAGAATTGGTTTCCATGATGGCGGCGGCTTCTTCCCATCCAATACCCAATTTCTCTCATAATATTCTGCCACGTGTCCTCTCCTTCTACCATCACTGGAAGAAGATTTACGGCTCTACGTTTGTGATTTGGTTCGGACCCATTGCTCGAGTTGCGGTATCCGACCCCGACATGATCCGAGAAATCTTCATCACTAACTCCCATTTTTACGAGAAAAACGAAGCCCATCCACTCGTTAAACAGCTCGAAGGCGACGGCCTCCTCACTCTCAATGGCCCAAAATGGGCTCTCCATCGCAAAATCATCTCCCCCACTTTTCACACAGACAATCTCAAATTGCTGATTCCTTTAGTAGAGGAAAGTGTAATGGATATGGTACAGAAATGGTCGTCTATGACGGAGGAAACGACCTCGGGCGAGGTGGAGATTGATGTTTTCGATAGCTTCCAAACGCTAACTGAAGATGTCATAACGAAAACAGCGTTCGGTTGTAGCTATGAAGATGGTAAAGCGATTTTCAAGATTCAAACTCAACAAATGATATTAGCTTCAGAAGCTTTTCAAAAGGTCTTCATTCCTGGCTATAGATTCTTGCCGACAAGAACAAATATGAAGTCGTGGAAATTAGAGAAGGAAATAAAGAAATCATTGCTGAAATTAATCGAGGGGCGAAAACGGAATTTTGAAAAGAATTGGGCAATTAATGAAAAAGGACCAAAAGATTTGTTGGGGCTCATGATCCAAGCTTCCATTTCTGTCCATGACATCGTGGAAGAATGCAAAAGCTTCTTCTTTGCTGGCAAACAGACCACTTCCAATCTGCTGACGTGGACTACTGTCTTGCTGGCAATGCATCCACGCTGGCAAATTCTGGCACGTCATGAGGTCTTTACCATCTGCGGTCCACGTGCCCTCCCCTCCTCTGATGACGTGTCCAAGTTCAAAATTCTGAGCATGATACTAAATGAATCCTTACGATTGTACCCACCCACCGTGGCTACAATCAGACGTGCAAACGCTGACGTGGAGCTAGGTGGACGAATGATCCCACGTGGCACGGAGTTTTTGATTCCAATCCTTGCCGTTCATCATGATCAAACTATTTGGGGCAACGATGCAAGTGAGTTTAATCCAGAGCGATTCTCAGACGGAGTAAGCCGAGCTGGAAATCATCCAGTTGGGTTCATTCCATTCGGACTTGGGGTTCGGAATTGCATCGGCCAAAATCTAGCAGTTTTGGAAGCAAAGTTGGCAATGGTGATTATACTTCAACGTCTCTCGTTTCGATTGGCTCCTACTTATCAGCATGCGCCGACTGTCCTGATGCTTCTTTATCCACAGTATGGCGCTCCCATTCTTTTTGAAAAGATAGCCTTAAATTAA 1482 45.07 MGLVLWWKPRRIENHFLRQGIGGPPYRFFIGNFKELVSMMAAASSHPIPNFSHNILPRVLSFYHHWKKIYGSTFVIWFGPIARVAVSDPDMIREIFITNSHFYEKNEAHPLVKQLEGDGLLTLNGPKWALHRKIISPTFHTDNLKLLIPLVEESVMDMVQKWSSMTEETTSGEVEIDVFDSFQTLTEDVITKTAFGCSYEDGKAIFKIQTQQMILASEAFQKVFIPGYRFLPTRTNMKSWKLEKEIKKSLLKLIEGRKRNFEKNWAINEKGPKDLLGLMIQASISVHDIVEECKSFFFAGKQTTSNLLTWTTVLLAMHPRWQILARHEVFTICGPRALPSSDDVSKFKILSMILNESLRLYPPTVATIRRANADVELGGRMIPRGTEFLIPILAVHHDQTIWGNDASEFNPERFSDGVSRAGNHPVGFIPFGLGVRNCIGQNLAVLEAKLAMVIILQRLSFRLAPTYQHAPTVLMLLYPQYGAPILFEKIALN 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2779472 2781574 - CmoCh10G006140.1 Cmo10g00614 389960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00614 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Cmo10g00614 493 Gene3D Cytochrome P450 6 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 Pfam Cytochrome P450 59 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 SUPERFAMILY Cytochrome P450 18 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00614 493 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 485 - -
Cmo10g00614 493 PANTHER CYTOCHROMEA2 4 485 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00614 Cmo12g01254 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00614 Cmo-Chr10:2779472 Cmo10g00784 Cmo-Chr10:3635735 1.63E-139 dispersed
Cmo10g00614 Cmo-Chr10:2779472 Cmo11g00556 Cmo-Chr11:2717443 0 wgd
Cmo10g00614 Cmo-Chr10:2779472 Cmo12g01254 Cmo-Chr12:11107044 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00614 K15639 - csv:101213466 864.374