Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g00614 | ATGGGGTTGGTGTTATGGTGGAAGCCAAGAAGGATAGAGAACCACTTTCTCCGGCAAGGAATTGGAGGGCCGCCGTATCGTTTCTTTATTGGTAATTTCAAAGAATTGGTTTCCATGATGGCGGCGGCTTCTTCCCATCCAATACCCAATTTCTCTCATAATATTCTGCCACGTGTCCTCTCCTTCTACCATCACTGGAAGAAGATTTACGGCTCTACGTTTGTGATTTGGTTCGGACCCATTGCTCGAGTTGCGGTATCCGACCCCGACATGATCCGAGAAATCTTCATCACTAACTCCCATTTTTACGAGAAAAACGAAGCCCATCCACTCGTTAAACAGCTCGAAGGCGACGGCCTCCTCACTCTCAATGGCCCAAAATGGGCTCTCCATCGCAAAATCATCTCCCCCACTTTTCACACAGACAATCTCAAATTGCTGATTCCTTTAGTAGAGGAAAGTGTAATGGATATGGTACAGAAATGGTCGTCTATGACGGAGGAAACGACCTCGGGCGAGGTGGAGATTGATGTTTTCGATAGCTTCCAAACGCTAACTGAAGATGTCATAACGAAAACAGCGTTCGGTTGTAGCTATGAAGATGGTAAAGCGATTTTCAAGATTCAAACTCAACAAATGATATTAGCTTCAGAAGCTTTTCAAAAGGTCTTCATTCCTGGCTATAGATTCTTGCCGACAAGAACAAATATGAAGTCGTGGAAATTAGAGAAGGAAATAAAGAAATCATTGCTGAAATTAATCGAGGGGCGAAAACGGAATTTTGAAAAGAATTGGGCAATTAATGAAAAAGGACCAAAAGATTTGTTGGGGCTCATGATCCAAGCTTCCATTTCTGTCCATGACATCGTGGAAGAATGCAAAAGCTTCTTCTTTGCTGGCAAACAGACCACTTCCAATCTGCTGACGTGGACTACTGTCTTGCTGGCAATGCATCCACGCTGGCAAATTCTGGCACGTCATGAGGTCTTTACCATCTGCGGTCCACGTGCCCTCCCCTCCTCTGATGACGTGTCCAAGTTCAAAATTCTGAGCATGATACTAAATGAATCCTTACGATTGTACCCACCCACCGTGGCTACAATCAGACGTGCAAACGCTGACGTGGAGCTAGGTGGACGAATGATCCCACGTGGCACGGAGTTTTTGATTCCAATCCTTGCCGTTCATCATGATCAAACTATTTGGGGCAACGATGCAAGTGAGTTTAATCCAGAGCGATTCTCAGACGGAGTAAGCCGAGCTGGAAATCATCCAGTTGGGTTCATTCCATTCGGACTTGGGGTTCGGAATTGCATCGGCCAAAATCTAGCAGTTTTGGAAGCAAAGTTGGCAATGGTGATTATACTTCAACGTCTCTCGTTTCGATTGGCTCCTACTTATCAGCATGCGCCGACTGTCCTGATGCTTCTTTATCCACAGTATGGCGCTCCCATTCTTTTTGAAAAGATAGCCTTAAATTAA | 1482 | 45.07 | MGLVLWWKPRRIENHFLRQGIGGPPYRFFIGNFKELVSMMAAASSHPIPNFSHNILPRVLSFYHHWKKIYGSTFVIWFGPIARVAVSDPDMIREIFITNSHFYEKNEAHPLVKQLEGDGLLTLNGPKWALHRKIISPTFHTDNLKLLIPLVEESVMDMVQKWSSMTEETTSGEVEIDVFDSFQTLTEDVITKTAFGCSYEDGKAIFKIQTQQMILASEAFQKVFIPGYRFLPTRTNMKSWKLEKEIKKSLLKLIEGRKRNFEKNWAINEKGPKDLLGLMIQASISVHDIVEECKSFFFAGKQTTSNLLTWTTVLLAMHPRWQILARHEVFTICGPRALPSSDDVSKFKILSMILNESLRLYPPTVATIRRANADVELGGRMIPRGTEFLIPILAVHHDQTIWGNDASEFNPERFSDGVSRAGNHPVGFIPFGLGVRNCIGQNLAVLEAKLAMVIILQRLSFRLAPTYQHAPTVLMLLYPQYGAPILFEKIALN | 493 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2779472 | 2781574 | - | CmoCh10G006140.1 | Cmo10g00614 | 389960 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g00614 | 493 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 431 | 440 | IPR017972 | GO:0005506|GO:0016705 | |
Cmo10g00614 | 493 | Gene3D | Cytochrome P450 | 6 | 489 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | Pfam | Cytochrome P450 | 59 | 471 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | PRINTS | P450 superfamily signature | 299 | 316 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | PRINTS | P450 superfamily signature | 352 | 363 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | PRINTS | P450 superfamily signature | 429 | 438 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | PRINTS | P450 superfamily signature | 438 | 449 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | PRINTS | E-class P450 group I signature | 392 | 416 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | PRINTS | E-class P450 group I signature | 185 | 203 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | PRINTS | E-class P450 group I signature | 308 | 334 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | PRINTS | E-class P450 group I signature | 428 | 438 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | PRINTS | E-class P450 group I signature | 288 | 305 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | PRINTS | E-class P450 group I signature | 438 | 461 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | SUPERFAMILY | Cytochrome P450 | 18 | 488 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo10g00614 | 493 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 4 | 485 | - | - | |
Cmo10g00614 | 493 | PANTHER | CYTOCHROMEA2 | 4 | 485 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00614 | Cmo12g01254 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00614 | Cmo-Chr10:2779472 | Cmo10g00784 | Cmo-Chr10:3635735 | 1.63E-139 | dispersed | |
Cmo10g00614 | Cmo-Chr10:2779472 | Cmo11g00556 | Cmo-Chr11:2717443 | 0 | wgd | |
Cmo10g00614 | Cmo-Chr10:2779472 | Cmo12g01254 | Cmo-Chr12:11107044 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g00614 | K15639 | - | csv:101213466 | 864.374 |