Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00631 ATGTCCAGAAAAACAAGAACAGCTCAGCCGACCAGATCGGAGTGTACGCCAAGTCAAAGCTGTGCAGGCAACAGTTTGGATGATGTCATCAGCGATCAGAGTGTCCCATTTGCCCACAAAACAAAACAATCTCTCCCCACCCTTGTTTTTTCTTCTCCTCCTCCTTCATTTGTCTACTTCCACTCTGTTCTTATGGCTCAAGTTTTTTACTTTCCCCCCCGTCTCCCATTTTTCCTAATTTCCCTTCTTTTTCTTCTTTGTTCTGTTCAATCTGAGCCCTCCGCTGACAAGGAAGCTCTTCTTGATTTCTTCAATAAAGTACCCCATGGCCCTCGTCTTCAATGGAATGCTTCCGCCTCTGCCTGTACTTGGGTTGGAGTTGTCTGTGATGCTACTCAGTCCTTTGTTTTTGCTCTCCGGTTACCGGCTGTTGGGCTTCTTGGTCCGATTCCGGCTGGCACTCTCGGTCGGTTGAATCGTCTTCGAGTTCTTAGTCTCCGGTCGAATGGGATCTCTGGGGGTTTGCCGACGGATTTTGCTAATTTGACGTTTCTTCGAAGTCTTTTTCTCCAAGACAACGAGCTTTCCGGCGATTTTCCAGTGAGTGTGACTCAGTTGACTCGGTTGACTCGTCTCGACCTCTCGTCGAACAATTTCTCTGGTTCGATTCCGTTTTCGGTGAATAATCTGACCCTGCTGACTGGGCTTTTCTTGGAGAATAATGGGTTTTCGGGTTCTCTGCCGAGTATTCCGGCGATTAGTTTAACGCACTTCAATGTATCGAATAATAAGCTCAATGGATCCATTCCCGAAACGCTAGCGAAATTTTCTGCTTCATCTTTTGCTGGGAATTTAGCTCTCTGCGGTGGTCCACTGCCGTCGTGCAACCCGTTTTTTCCATCCCCTGCTCCGTCGCCGACGTCCCCCTTGAAACCCCCACAATTTCCCGTCGAGAAGAAATCGAGAAAGCTCTCAATCGCCGCCATTGTCGGAATTGTCGTTGGCGCTGCTTTTGTCGCGTTTCTATTGCTGTTTCTTCTCCTATTTTGCCTTCGAAAGCGCGAGCGGAGGCAACCAGCGAAGCCACCGACTACAGTGGTTGCTGCTCGATCTGTACCGGCGGAGGCCGGGACATCGTCTTCGAAAGACGACATCACCGGCGGATCAGTGGAGACAGAGAAAAACAAATTAGTGTTCTTCGAGGGTGGGATTTACAGCTTCGACTTGGAGGACTTGTTGAGAGCTTCGGCGGAGGTTTTAGGAAAAGGAAGTGTCGGAACGTCGTACAAGGCGGTGCTGGAAGAAGGGACCACCGTGGTGGTGAAGAGATTGAAAGATGTGGTGGTAACGAAGAAGGAGTTCGAGACGCAAATGGAGGCTGTGGGAATCATTAACCATGAAAATGTGGTTCCTCTCAGAGCTTTCTACTTCTCCAGAGATGAGAAATTGCTTGTTTCCGATTACATGGCCGCCGGCAGTCTTTCCTCCTCCCTTCACGGAAGCAGAGGATCCGGCCGTACGCCGCTTGACTGGGACAACCGGATGAAAATCGCATTAAGCGCGGCAAGAGGATTGGCTCACCTCCACGTGTCAGGAAAACTCATCCACGGCAACATTAAATCGTCGAACATTCTCCTCCGTCCCAACCACGATGCCGCCGTTTCAGACTTCGGCCTTAACCCTCTCTTTGGCACCTTAACGCCACCCAATCGGATTGCTGGTTACCGCGCGCCGGAGGTTGTCGAAACCCGTAAGGTCACGTTCAAGTCCGACGTGTACAGTTTTGGCGTTTTGCTGTTGGAGCTTCTCACCGGGAAATCGCCAAATCAATCGTCGTTGGGCGAAGAAGGGATTGATCTTCCGCGGTGGGTCCAGTCGGTGGTTCGAGAGGAATGGACGGCGGAAGTTTTTGATGTGGAATTGATGAGACACCACAATATCGAAGAAGAGATGGTTCAGCTTTTACAAATTGCCATGTCCTGCGTCGCCGCCATGCCGGACCAGCGCCCGTCGATGCAGGAAGTGGTTCGTATGATTGAGGATCTAAACCGCGTTGAGACCGACGATGGCTTACGCCAGTCATCCGATGACCCATCTAAAGGGTCGGAGGGCCACACGCCGCCGTCGGAGTCCAGAACCACCCCTCCCGGAGCCGGTGTACCACCGTAG 2169 51.36 MSRKTRTAQPTRSECTPSQSCAGNSLDDVISDQSVPFAHKTKQSLPTLVFSSPPPSFVYFHSVLMAQVFYFPPRLPFFLISLLFLLCSVQSEPSADKEALLDFFNKVPHGPRLQWNASASACTWVGVVCDATQSFVFALRLPAVGLLGPIPAGTLGRLNRLRVLSLRSNGISGGLPTDFANLTFLRSLFLQDNELSGDFPVSVTQLTRLTRLDLSSNNFSGSIPFSVNNLTLLTGLFLENNGFSGSLPSIPAISLTHFNVSNNKLNGSIPETLAKFSASSFAGNLALCGGPLPSCNPFFPSPAPSPTSPLKPPQFPVEKKSRKLSIAAIVGIVVGAAFVAFLLLFLLLFCLRKRERRQPAKPPTTVVAARSVPAEAGTSSSKDDITGGSVETEKNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFETQMEAVGIINHENVVPLRAFYFSRDEKLLVSDYMAAGSLSSSLHGSRGSGRTPLDWDNRMKIALSAARGLAHLHVSGKLIHGNIKSSNILLRPNHDAAVSDFGLNPLFGTLTPPNRIAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKSPNQSSLGEEGIDLPRWVQSVVREEWTAEVFDVELMRHHNIEEEMVQLLQIAMSCVAAMPDQRPSMQEVVRMIEDLNRVETDDGLRQSSDDPSKGSEGHTPPSESRTTPPGAGVPP 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2860458 2864422 - CmoCh10G006310.1 Cmo10g00631 389977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00631 722 Gene3D Transferase(Phosphotransferase) domain 1 489 700 - -
Cmo10g00631 722 PANTHER OS05G0480400 PROTEIN 78 700 - -
Cmo10g00631 722 MobiDBLite consensus disorder prediction 682 699 - -
Cmo10g00631 722 MobiDBLite consensus disorder prediction 360 388 - -
Cmo10g00631 722 Gene3D Ribonuclease Inhibitor 94 251 IPR032675 -
Cmo10g00631 722 MobiDBLite consensus disorder prediction 1 20 - -
Cmo10g00631 722 Pfam Leucine rich repeat N-terminal domain 94 130 IPR013210 -
Cmo10g00631 722 MobiDBLite consensus disorder prediction 682 722 - -
Cmo10g00631 722 SUPERFAMILY Protein kinase-like (PK-like) 418 679 IPR011009 -
Cmo10g00631 722 SUPERFAMILY L domain-like 111 276 - -
Cmo10g00631 722 Gene3D Phosphorylase Kinase; domain 1 381 488 - -
Cmo10g00631 722 PANTHER OS05G0588300 PROTEIN 78 700 - -
Cmo10g00631 722 Pfam Protein kinase domain 417 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00631 722 Gene3D Ribonuclease Inhibitor 252 298 IPR032675 -
Cmo10g00631 722 ProSiteProfiles Protein kinase domain profile. 414 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00631 Cmo12g01258 CCT
Cmo05g01333 Cmo10g00631 CCT
Cmo10g00631 Cmo11g00588 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00631 Cmo-Chr10:2860458 Cmo20g00327 Cmo-Chr20:1600161 0 dispersed
Cmo10g00631 Cmo-Chr10:2860458 Cmo11g00588 Cmo-Chr11:2841086 0 wgd
Cmo10g00631 Cmo-Chr10:2860458 Cmo12g01258 Cmo-Chr12:11166731 0 wgd
Cmo10g00631 Cmo-Chr10:2860458 Cmo05g01333 Cmo-Chr5:10335096 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74617 PF00069 Pkinase 1.90E-35 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00631 - - cmo:103501524 1050.81