Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00644 ATGGAGGAGAATCACTGCAATGGAAATTCTCAATCCCAGCTCAATTTACCCAAAATCAAGTTCACAAAGCTTTTCATCAATGGACAATTCCTTGACTCTGTTTCAGGAAAAACTTTGGAGACCATAGATCCAAGAACAGGGGAGGTTATCGCGTCGGTGGCCGCCGGGGACAAAGAAGACGTGGATTTGGCCGTGAAAGCCGCCCGTGAGGCCTTCGATCATGGCCCTTGGCCACGCATGTCCGGCGCCGAGAGGGGGAGGATAATGACAAAACTAGCGGAATTGATAGATGCACACGTGGAGGAACTGGCAGCGTTGGATACCATCGACGCTGGAAAATCGTTTCATCTGGGGAAAATAGTGGATATACCCGGGGCTGCAAATACGCTGCGGTACTACGCAGGTGCAGCGGATAAAATTCACGGCAAGATATTGAAAATGTCAAGGCCGCTTCATGGCTACACGTTACTGGAGCCGATTGGAGTGGTGGGCCATATCATACCGTGGAACTTTCCGACGACCATGTTCTGGTTGAAAGTCAGCCCAGCGTTGGCTGCCGGATGCACCATGATCGTCAAGCCCGCCGAACAGACGCCCCTCTCCGCCCTGTTCTACGCTCATCTCGCCAAACTGGCTGGCATTCCAGATGGAGTACTCAACGTTGTGACTGGATATGGACCAACCGCAGGGTCCAGCATTGCATCACACATGGATATTGACAAGGTGAGCTTCACAGGATCAACCAAGGTGGGGAGGTTGATAATGCAGGCCGCAAGTGCCAGTAACCTGAAGCAAGTGTCATTGGAATTAGGAGGCAAATCCCCTCTTCTAATCTTCGATGATGCTGATATCAACAAAGCCGTCGATCTTGCTCTCCTCGCCATTTTTTACAACAAGGGAGAAATCTGCGTGGCCGGCTCCCGGGTTCTGGTTCAAGAAGGAATTTATGATGAATTCGTCAAAAAGATTAGCGAAAAGGCCAAGTCCTGGGTGGTGGGAGACCCTTTTGATCCCAAAGTTAACTATGGACCCCAGGTGGACAAAAAGCAACTGGATAAGATTCTGATGTACATAGAACACGGTAAAAGAGAAGGAGCAACGCTGGTTACAGGCGGCAAGCGTATAGGCGAAGTGGGGTATTACGTAGAGCCCACAATCTTCACAGACGTCAAGGAAGACTCGCTGATTGCGCAGGATGAAATATTCGGGCCAGTTCTGTCCGTCATAAAATTCAAGACGATTGAAGAGGGAATAAGGAGCGCAAACAACACCAAGTACGGGCTGGCAGCTGGGATAGTAACGAACAACATAGACATAGCCAACACGGTGTCCAGGTCCATCCGAGCGGGTACCATTTGGCTAAATTGTTACTTTGCTTTCGACTCGAGCTGCCCGTTCGGAGGGTATAAGGCGAGTGGGTTCGGGAGAGACTCTGGAATGCAGGCTATCCATAAGTATCTTCAAACCAAAGCCGTCGTCACTCCTTTGGTTAATTCTCCTTGGCTTTGA 1509 50.1 MEENHCNGNSQSQLNLPKIKFTKLFINGQFLDSVSGKTLETIDPRTGEVIASVAAGDKEDVDLAVKAAREAFDHGPWPRMSGAERGRIMTKLAELIDAHVEELAALDTIDAGKSFHLGKIVDIPGAANTLRYYAGAADKIHGKILKMSRPLHGYTLLEPIGVVGHIIPWNFPTTMFWLKVSPALAAGCTMIVKPAEQTPLSALFYAHLAKLAGIPDGVLNVVTGYGPTAGSSIASHMDIDKVSFTGSTKVGRLIMQAASASNLKQVSLELGGKSPLLIFDDADINKAVDLALLAIFYNKGEICVAGSRVLVQEGIYDEFVKKISEKAKSWVVGDPFDPKVNYGPQVDKKQLDKILMYIEHGKREGATLVTGGKRIGEVGYYVEPTIFTDVKEDSLIAQDEIFGPVLSVIKFKTIEEGIRSANNTKYGLAAGIVTNNIDIANTVSRSIRAGTIWLNCYFAFDSSCPFGGYKASGFGRDSGMQAIHKYLQTKAVVTPLVNSPWL 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2954680 2958337 - CmoCh10G006440.1 Cmo10g00644 389990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00644 502 SUPERFAMILY ALDH-like 16 497 IPR016161 GO:0016491
Cmo10g00644 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491
Cmo10g00644 502 Pfam Aldehyde dehydrogenase family 33 492 IPR015590 GO:0016491
Cmo10g00644 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491
Cmo10g00644 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 490 IPR016162 GO:0016491
Cmo10g00644 502 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 5 502 - -
Cmo10g00644 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620
Cmo10g00644 502 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 5 502 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g01242 Cmo-Chr8:7855275 Cmo10g00644 Cmo-Chr10:2954680 5.77E-67 dispersed
Cmo10g00644 Cmo-Chr10:2954680 Cmo12g00001 Cmo-Chr12:477 0 dispersed
Cmo10g00644 Cmo-Chr10:2954680 Cmo11g00602 Cmo-Chr11:2906497 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00644 K12355 - csv:101219029 900.197