Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00657 ATGTCGTCTCCGAGCTCTCCGCCGGCGCCTAGTACGACCTCACCCCTACCTCCGACCACCGACGCACCACCCCCGGCGGAGCCGTCTCTCTCACCGCCGTCTCCTGACGCTGCCTCTCAGCCTCCACCTGCTACATCCCTGCCGCCTTCTACCACTCCTTCGCCGCCGCCTCCGGACAGTGCTACTCCATCCCCGCCACCTCCGGACAGTGCTACTCCTTCGCCGCCGCCTCCGGACAGTGCTACTCCATCCCCACCGCCTCCTGACAGTGCTACTCCATCCCCGCCTACTACTTCTCCTTTACCACCTACAGCTCCTAAGAGCTCTTCGCCGCCGCCGCCGGACAGTGCCACTCCATCTCCGCCTACTTCTTTACCGCCTACATCGCCTTCGGGCTCTTCGCCGCCGCCGCCGCCGTCGAATTCTAGTACACCTACGAGTCCAGGAGGACATGTCGCTCCGCCGTCGAATTCTAGTACACCAACGAATCCGGGAGGAAATGAGGCTCCGCCGTCTTTCTCACCGTCGTCGGGAGTTTCGGCTGGACTTGTGACTGGAGTTGTCATTGCTGGAGTGGTGGTGGTGGTTGCTGCGTTCATTCTTTTGGTTTTGTGTTTAAGAAAGAAGAGAAGACGTGACGAGGAGTCGTACTACCGGCCGCCGCCACCGGGGGCGTTTAAAGATGGCCCATATGGTCCCCAACAGCACCACTGGCAATCACATCTGCCGCCGTTGCCGCCGACTAATCATGTCGTGGGGACAGTACCGAAGCCATCTCCTCCGCCAGCATCACGACCACCACCGTCTCCTTCACCAGCATCACGACCGCAGCCGTCACCTCTGACTATAAACAGCAGCGGAGGATCTGGATCTTATTATTCAGGGTCTGAATATTCGCATGCTCCTGCTCCTGCTCCATCTTCTATTCCCTTGGGCTACTCGCAAAGCAGCTTCACTTATGAAGAGTTAGCAATGGCGACAGACAGGTTTTCAGAAGCCAATCTCCTTGGACAAGGTGGGTTTGGTTATGTGCATAAAGGAGTCCTTCCAAACGGAAAGGAAGTGGCAGTGAAACAACTCAAGGCTGGAAGTGGACAGGGAGAGCGTGAATTTCAAGCAGAAGTGGAAATAATCAGCCGTGTTCATCATAGACATCTTGTTTCCTTGGTGGGGTATTGCATCACCGGCTCCCAAAGATTGCTGGTTTATGAATTTGTTCCAAACAACACATTGGAGTTCCACTTGCACGGGAAAGGACGACCCACCATGGATTGGCCAACGAGACTCAAAATTGCTCTTGGATCTGCCAAGGGATTGGCCTACCTTCATGAAGACTGTAATCCTAAGATCATTCATCGTGACATCAAAGCTGCAAATATACTTCTGGATCTCAAATTCGAAGCAATGGTTGCAGATTTTGGGCTTGCCAAATTGTCTTCTGATGTTAATACCCACGTTTCAACTCGAGTTATGGGAACTTTCGGCTACCTTGCTCCTGAATACGCTTCAAGTGGGAAACTCACTGATAAATCAGATGTCTTCTCCTTCGGAGTGATGCTTTTGGAGCTGATTACTGGGCGCAGACCTGTGGATACAACTCAATCATACATGGACGATGGACTGCTCGATTGGGCAAGGCCATTACTACTTAGGGCCGCAGAAGATGGGAACTACGATGGTCTAGTAGATCCAAAGCTGCGAGATAACTACGACCATAATGAGATGGGTCGGATGATTGCTTGTGCAGCTGCCTGTGTGCGCCATTCGGCGAGGCGCCGGCCACGGATGAGTCAAGTGGTTCATGCTCTTGAAGGTGAAGCCTCGCTTTCTGATCTTAACAAAGGGGTTCAGCCTGGACATAGCACCGTCTACAGTTCTCATGGAAGCTCCGACTACGACACATCTCAGTACAATGAGGACATGAAGAAGTTCAGGAAGATGGCATTGGCAAGCCAGGAGTACGGCAGCGAGTACAGCGAGCCGACGAGTGAGTATGGTTTGTATCCATCTGGGTCGAGTGGCGATGGCCCAACAACAAGGGAAATGGAAATGAGAACAATGAAGACAGAAAGTGGAGGTTCTTGA 2085 53.24 MSSPSSPPAPSTTSPLPPTTDAPPPAEPSLSPPSPDAASQPPPATSLPPSTTPSPPPPDSATPSPPPPDSATPSPPPPDSATPSPPPPDSATPSPPTTSPLPPTAPKSSSPPPPDSATPSPPTSLPPTSPSGSSPPPPPSNSSTPTSPGGHVAPPSNSSTPTNPGGNEAPPSFSPSSGVSAGLVTGVVIAGVVVVVAAFILLVLCLRKKRRRDEESYYRPPPPGAFKDGPYGPQQHHWQSHLPPLPPTNHVVGTVPKPSPPPASRPPPSPSPASRPQPSPLTINSSGGSGSYYSGSEYSHAPAPAPSSIPLGYSQSSFTYEELAMATDRFSEANLLGQGGFGYVHKGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCNPKIIHRDIKAANILLDLKFEAMVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDTTQSYMDDGLLDWARPLLLRAAEDGNYDGLVDPKLRDNYDHNEMGRMIACAAACVRHSARRRPRMSQVVHALEGEASLSDLNKGVQPGHSTVYSSHGSSDYDTSQYNEDMKKFRKMALASQEYGSEYSEPTSEYGLYPSGSSGDGPTTREMEMRTMKTESGGS 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3018920 3022066 + CmoCh10G006570.1 Cmo10g00657 390003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00657 694 Pfam Protein tyrosine and serine/threonine kinase 334 602 IPR001245 GO:0004672|GO:0006468
Cmo10g00657 694 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 92 683 - -
Cmo10g00657 694 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 92 683 - -
Cmo10g00657 694 MobiDBLite consensus disorder prediction 249 277 - -
Cmo10g00657 694 MobiDBLite consensus disorder prediction 211 299 - -
Cmo10g00657 694 ProSiteProfiles Protein kinase domain profile. 330 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00657 694 MobiDBLite consensus disorder prediction 654 694 - -
Cmo10g00657 694 Gene3D Phosphorylase Kinase; domain 1 305 405 - -
Cmo10g00657 694 Gene3D Transferase(Phosphotransferase) domain 1 406 617 - -
Cmo10g00657 694 MobiDBLite consensus disorder prediction 145 177 - -
Cmo10g00657 694 SUPERFAMILY Protein kinase-like (PK-like) 307 603 IPR011009 -
Cmo10g00657 694 MobiDBLite consensus disorder prediction 278 296 - -
Cmo10g00657 694 MobiDBLite consensus disorder prediction 611 635 - -
Cmo10g00657 694 PRINTS Proline rich extensin signature 1 17 - -
Cmo10g00657 694 PRINTS Proline rich extensin signature 21 33 - -
Cmo10g00657 694 PRINTS Proline rich extensin signature 37 58 - -
Cmo10g00657 694 PRINTS Proline rich extensin signature 62 78 - -
Cmo10g00657 694 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Cmo10g00657 694 MobiDBLite consensus disorder prediction 1 144 - -
Cmo10g00657 694 SMART serkin_6 330 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00657 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Cmo10g00657 694 MobiDBLite consensus disorder prediction 614 635 - -
Cmo10g00657 694 MobiDBLite consensus disorder prediction 1 177 - -
Cmo10g00657 694 MobiDBLite consensus disorder prediction 655 679 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00657 Cmo12g01280 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00836 Cmo-Chr4:4161753 Cmo10g00657 Cmo-Chr10:3018920 3.14E-180 dispersed
Cmo10g00657 Cmo-Chr10:3018920 Cmo15g00209 Cmo-Chr15:1017698 7.47E-159 dispersed
Cmo13g00872 Cmo-Chr13:7931230 Cmo10g00657 Cmo-Chr10:3018920 2.63E-62 dispersed
Cmo10g00657 Cmo-Chr10:3018920 Cmo11g00619 Cmo-Chr11:2957148 0 wgd
Cmo10g00657 Cmo-Chr10:3018920 Cmo12g01280 Cmo-Chr12:11331888 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74618 PF07714 PK_Tyr_Ser-Thr 2.10E-44 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00657 - - cpep:111779918 1001.89