Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g00658 | ATGATCGGATATTCGATTTCTTCGTCGTCTATCTCCTTCTTCGTCATCTTCGTCCCCATCTTTATCTCCATTTCTGTTTTCCAATTCAACCCCTCATCCGATCACACCGTATTCCAAACCCTAACTCGAAACTACTCACCCAACGATCCATTTACATCCAAGAACGTCACTGATGGGAACCGAGTCTCGCAGAAGAACTACATTGTTCGCTTCGTCCAATACAGGGAGGCGAAGGAGCATCGATTTTATCTGGAGTCACGTATTAGATCGGGCGGCTGGAAATGGATCGAGAGGCGGAACCCTGCGTCCAAGTATCCAACCGATTTCGGCTTGGTATCAATTGAGGACTCGGTGGTAATGGAGCTGGTTGAGGAGATTGAGGAATTGGAGCTTGTCAAGGATGTGAATGTCGATGCAAGCCACGTCAGGGGTTTGCTAGCGGAGGGTGGGGGTAGAATTGGGGCTTTTGTCGATGGGAAGAAGCGTCCGGGGAAGATTTTCACCTCCATGTCTTTTAACGAAGAAGGTGGGGAACGTTATACGGCAATTAGCAATGCCTCTAATAGATGGGGACGGCATCTGTTGATGCAGAGATCTCAAGTCACCTCATTATTTGGAGCAGACTCTCTTTGGGCAAAGGGGTATACTGGTTCCAAAGTCAAGATGGCTATATTCGATACTGGTATTCGTGCTAATCACCCACATTTTAGGAATATCAAGGAGCGAACAAATTGGACCAATGAAGATACTTTAAATGATAATCTTGGACATGGGACATTTGTTGCTGGTGTCATTGCTGGTGGGGATGAAGAATGTCTAGGGTTTGCTCCAGATACGGAGATATATGCTTTTCGTGTGTTTACAGATGCACAGGTGTCATACACTTCATGGTTCCTCGATGCATTCAACTATGCAATTGCTACCAATATGGATGTATTAAATTTGAGCATTGGTGGACCAGATTACTTAGATCTTCCATTCGTGGAGAAGATTTGGGAAATAACGGCAAATAATATCATCATGGTTTCGGCAATTGGGAATGATGGACCACTTTACGGGACCTTAAACAATCCTGCAGATCAGAGTGATGTCATTGGTGTTGGTGGTATTGACTACAATGATCACATTGCTTCGTTTTCCTCACGTGGCATGACTACTTGGGAGATGCCTCATGGTAATGGTCGTGTGAAGCCAGATGTTGTTGCATATGGTCGGGAAATTATGGGATCAAAAATTAGTACTGGGTGCAAAAGTTTATCAGGCACTAGTGTGGCAAGTCCTGTGGTTGCTGGTGTGGTATGTCTGCTTGTTAGTGTCATCCCTGAAAGCCAGCGGAAGACTATTTTAAATCCAGCTAGCATGAAACAAGCACTTGTTGAGGGAGCTGCAAAGCTTGCTGGTCCTAATATGTACGAGCAAGGTGCTGGCAGAGTTGATCTGTTAGAATCGTATGAAATACTTAAGAGCTACCAACCTCGGGCAAGCATCTTCCCTGGTGTTCTTGACTATACAGATTGCCCTTATACATGGCCCTTTTGTCGCCAACCTCTTTATGCAGGTGCAATGCCTATTATTTTCAATGCTACCATTTTGAATGGAATGGGTGTAATTGGCTATGTTGAAGGTCAACCAACTTGGAATCCTTCGGATGAAGAAGGAAATCTCTTAAGTATTCACTTCACTTATTCTAAGGTTATCTGGCCTTGGACTGGTTACATTGCACTTCATATGCAAATTAAGGAGGAAGGTGCACAGTTTTCTGGAGAAATTGAGGGCAATGTGACTCTAACAGTATATAGTCCTCCATCTAGAGGAGAGAAGAACCGCCGGATTAGTACTTGTGTGCTACAGCTGAAGTTAAAAGTGGTTCCAACACCTCCAAGATCAAAACGAATTTTATGGGATCAATTTCATAACATCAAATATCCTCCTGGTTATATTCCTAGAGATTCCTTGGATGTACGCAATGACATTCTGGACTGGCATGGAGACCACCTGCATACAAATTTTCATATTATGTTTAACATGTTAAGAGATGCTGGATACTATGTTGAAACGCTTGGTTCTCCTCTAACATGCTTTGATGCTCGCCAATATGGGACGCTTTTACTAGTGGATCTTGAAGATGAGTACTTCAAAGAGGAAATTGAAAAGTTGAGGGACGATGTTATGATTACTGGATTGGGGTTGGCTGTGTTTTCTGAATGGTATAATGTAGAAACAATGGTAAAGATGAGGTTTTTCGATGATAACACAAGAAGCTGGTGGACTCCAGTTACTGGAGGTGCAAATATTCCTGCACTAAATGATCTTTTAGCCCCATTTGGTATTGCTTTCGGGGATAAGATTTTGAATGGTGATTTTTCTATTGATGGTGAACAGAGTCGGTATGCATCAGGAACAGATATTGTGAGGTTTCCACGAGGTGGTTATGTGCATAGTTTCCCTTTCATTGATAGCTCAGAGAGTGGGGCGGCTCAGAGCATACTAACATCTAGCCTGAGTAAGGCAGACTTTCCAATTCTTGGCCTATTAGAGGCAGCAGAAGGCCGCATTGCAGTCTATGGAGATTCAAATTGTCTAGATAGCAGCCATATGGTTACAAATTGCTATTGGCTCCTGAGGAAAATATTAGATTTTACCAGTGGAAATATTAGAGATCCGGTGCTATTCACCAAGTTTTCCAAACAAAATTCACCTCTATATCTTGAAGATAACAAACTTCCATCTCGAAGAAGCGATGCAAATTTCTCTTTGTATTCTGCGGTTTCTGGAAAGGAATTGATATGCATGAGTGATTCTAGGTTTGAAGTATGGGGTACCAAGGGATACAGCGTACAGGGCAGGGGAAGGAATAGAAGGCTGCCTGGATTTCCCTTAATTGACTTGGGAAGAGACTTGAATTCTACTCCAGAAAGTTCTTTGATGGGACCTCCCAAGTTGACTTTAAAGGACCGAAGTGATAAATATGGAAACCGATACTTAAGCTTGTTCTACCGGGATGAGCCTGACATGCCTTTGATTGTTCCTAATCATTGGCTTGTTCCTGCTGTAGTTGCAGTCGCAGGGCTGTTGCTTCTTTTGAGTTTTTGGCGAATTAGACAGAAGCGACGACGTCGACGAAGAGGATCGGGATCTGCTGCACGTTTTTCCAATCTCTAG | 3162 | 43.23 | MIGYSISSSSISFFVIFVPIFISISVFQFNPSSDHTVFQTLTRNYSPNDPFTSKNVTDGNRVSQKNYIVRFVQYREAKEHRFYLESRIRSGGWKWIERRNPASKYPTDFGLVSIEDSVVMELVEEIEELELVKDVNVDASHVRGLLAEGGGRIGAFVDGKKRPGKIFTSMSFNEEGGERYTAISNASNRWGRHLLMQRSQVTSLFGADSLWAKGYTGSKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGGDEECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMTTWEMPHGNGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPESQRKTILNPASMKQALVEGAAKLAGPNMYEQGAGRVDLLESYEILKSYQPRASIFPGVLDYTDCPYTWPFCRQPLYAGAMPIIFNATILNGMGVIGYVEGQPTWNPSDEEGNLLSIHFTYSKVIWPWTGYIALHMQIKEEGAQFSGEIEGNVTLTVYSPPSRGEKNRRISTCVLQLKLKVVPTPPRSKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDARQYGTLLLVDLEDEYFKEEIEKLRDDVMITGLGLAVFSEWYNVETMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSIDGEQSRYASGTDIVRFPRGGYVHSFPFIDSSESGAAQSILTSSLSKADFPILGLLEAAEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSGNIRDPVLFTKFSKQNSPLYLEDNKLPSRRSDANFSLYSAVSGKELICMSDSRFEVWGTKGYSVQGRGRNRRLPGFPLIDLGRDLNSTPESSLMGPPKLTLKDRSDKYGNRYLSLFYRDEPDMPLIVPNHWLVPAVVAVAGLLLLLSFWRIRQKRRRRRRGSGSAARFSNL | 1053 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3022141 | 3028089 | - | CmoCh10G006580.1 | Cmo10g00658 | 390004 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g00658 | 1053 | PANTHER | MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE | 61 | 877 | - | - | |
Cmo10g00658 | 1053 | PANTHER | PEPTIDASE S8 | 61 | 877 | - | - | |
Cmo10g00658 | 1053 | PRINTS | Subtilisin serine protease family (S8) signature | 217 | 236 | IPR015500 | - | |
Cmo10g00658 | 1053 | PRINTS | Subtilisin serine protease family (S8) signature | 253 | 266 | IPR015500 | - | |
Cmo10g00658 | 1053 | PRINTS | Subtilisin serine protease family (S8) signature | 420 | 436 | IPR015500 | - | |
Cmo10g00658 | 1053 | Pfam | Subtilase family | 217 | 468 | IPR000209 | GO:0006508|GO:0008236 | |
Cmo10g00658 | 1053 | ProSitePatterns | Serine proteases, subtilase family, histidine active site. | 257 | 267 | IPR022398 | - | |
Cmo10g00658 | 1053 | SUPERFAMILY | Subtilisin-like | 203 | 482 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo10g00658 | 1053 | CDD | Peptidases_S8_SKI-1_like | 211 | 467 | IPR034185 | - | |
Cmo10g00658 | 1053 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 421 | 431 | IPR023828 | - | |
Cmo10g00658 | 1053 | Gene3D | Peptidase S8/S53 domain | 195 | 485 | IPR036852 | GO:0004252|GO:0006508 | |
Cmo10g00658 | 1053 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 189 | 487 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00658 | Cmo-Chr10:3022141 | Cmo20g00753 | Cmo-Chr20:3786305 | 6.69E-07 | dispersed | |
Cmo10g00658 | Cmo-Chr10:3022141 | Cmo02g00248 | Cmo-Chr2:1173478 | 4.37E-07 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g00658 | K08653 | - | csv:101222509 | 1919.44 |