Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00658 ATGATCGGATATTCGATTTCTTCGTCGTCTATCTCCTTCTTCGTCATCTTCGTCCCCATCTTTATCTCCATTTCTGTTTTCCAATTCAACCCCTCATCCGATCACACCGTATTCCAAACCCTAACTCGAAACTACTCACCCAACGATCCATTTACATCCAAGAACGTCACTGATGGGAACCGAGTCTCGCAGAAGAACTACATTGTTCGCTTCGTCCAATACAGGGAGGCGAAGGAGCATCGATTTTATCTGGAGTCACGTATTAGATCGGGCGGCTGGAAATGGATCGAGAGGCGGAACCCTGCGTCCAAGTATCCAACCGATTTCGGCTTGGTATCAATTGAGGACTCGGTGGTAATGGAGCTGGTTGAGGAGATTGAGGAATTGGAGCTTGTCAAGGATGTGAATGTCGATGCAAGCCACGTCAGGGGTTTGCTAGCGGAGGGTGGGGGTAGAATTGGGGCTTTTGTCGATGGGAAGAAGCGTCCGGGGAAGATTTTCACCTCCATGTCTTTTAACGAAGAAGGTGGGGAACGTTATACGGCAATTAGCAATGCCTCTAATAGATGGGGACGGCATCTGTTGATGCAGAGATCTCAAGTCACCTCATTATTTGGAGCAGACTCTCTTTGGGCAAAGGGGTATACTGGTTCCAAAGTCAAGATGGCTATATTCGATACTGGTATTCGTGCTAATCACCCACATTTTAGGAATATCAAGGAGCGAACAAATTGGACCAATGAAGATACTTTAAATGATAATCTTGGACATGGGACATTTGTTGCTGGTGTCATTGCTGGTGGGGATGAAGAATGTCTAGGGTTTGCTCCAGATACGGAGATATATGCTTTTCGTGTGTTTACAGATGCACAGGTGTCATACACTTCATGGTTCCTCGATGCATTCAACTATGCAATTGCTACCAATATGGATGTATTAAATTTGAGCATTGGTGGACCAGATTACTTAGATCTTCCATTCGTGGAGAAGATTTGGGAAATAACGGCAAATAATATCATCATGGTTTCGGCAATTGGGAATGATGGACCACTTTACGGGACCTTAAACAATCCTGCAGATCAGAGTGATGTCATTGGTGTTGGTGGTATTGACTACAATGATCACATTGCTTCGTTTTCCTCACGTGGCATGACTACTTGGGAGATGCCTCATGGTAATGGTCGTGTGAAGCCAGATGTTGTTGCATATGGTCGGGAAATTATGGGATCAAAAATTAGTACTGGGTGCAAAAGTTTATCAGGCACTAGTGTGGCAAGTCCTGTGGTTGCTGGTGTGGTATGTCTGCTTGTTAGTGTCATCCCTGAAAGCCAGCGGAAGACTATTTTAAATCCAGCTAGCATGAAACAAGCACTTGTTGAGGGAGCTGCAAAGCTTGCTGGTCCTAATATGTACGAGCAAGGTGCTGGCAGAGTTGATCTGTTAGAATCGTATGAAATACTTAAGAGCTACCAACCTCGGGCAAGCATCTTCCCTGGTGTTCTTGACTATACAGATTGCCCTTATACATGGCCCTTTTGTCGCCAACCTCTTTATGCAGGTGCAATGCCTATTATTTTCAATGCTACCATTTTGAATGGAATGGGTGTAATTGGCTATGTTGAAGGTCAACCAACTTGGAATCCTTCGGATGAAGAAGGAAATCTCTTAAGTATTCACTTCACTTATTCTAAGGTTATCTGGCCTTGGACTGGTTACATTGCACTTCATATGCAAATTAAGGAGGAAGGTGCACAGTTTTCTGGAGAAATTGAGGGCAATGTGACTCTAACAGTATATAGTCCTCCATCTAGAGGAGAGAAGAACCGCCGGATTAGTACTTGTGTGCTACAGCTGAAGTTAAAAGTGGTTCCAACACCTCCAAGATCAAAACGAATTTTATGGGATCAATTTCATAACATCAAATATCCTCCTGGTTATATTCCTAGAGATTCCTTGGATGTACGCAATGACATTCTGGACTGGCATGGAGACCACCTGCATACAAATTTTCATATTATGTTTAACATGTTAAGAGATGCTGGATACTATGTTGAAACGCTTGGTTCTCCTCTAACATGCTTTGATGCTCGCCAATATGGGACGCTTTTACTAGTGGATCTTGAAGATGAGTACTTCAAAGAGGAAATTGAAAAGTTGAGGGACGATGTTATGATTACTGGATTGGGGTTGGCTGTGTTTTCTGAATGGTATAATGTAGAAACAATGGTAAAGATGAGGTTTTTCGATGATAACACAAGAAGCTGGTGGACTCCAGTTACTGGAGGTGCAAATATTCCTGCACTAAATGATCTTTTAGCCCCATTTGGTATTGCTTTCGGGGATAAGATTTTGAATGGTGATTTTTCTATTGATGGTGAACAGAGTCGGTATGCATCAGGAACAGATATTGTGAGGTTTCCACGAGGTGGTTATGTGCATAGTTTCCCTTTCATTGATAGCTCAGAGAGTGGGGCGGCTCAGAGCATACTAACATCTAGCCTGAGTAAGGCAGACTTTCCAATTCTTGGCCTATTAGAGGCAGCAGAAGGCCGCATTGCAGTCTATGGAGATTCAAATTGTCTAGATAGCAGCCATATGGTTACAAATTGCTATTGGCTCCTGAGGAAAATATTAGATTTTACCAGTGGAAATATTAGAGATCCGGTGCTATTCACCAAGTTTTCCAAACAAAATTCACCTCTATATCTTGAAGATAACAAACTTCCATCTCGAAGAAGCGATGCAAATTTCTCTTTGTATTCTGCGGTTTCTGGAAAGGAATTGATATGCATGAGTGATTCTAGGTTTGAAGTATGGGGTACCAAGGGATACAGCGTACAGGGCAGGGGAAGGAATAGAAGGCTGCCTGGATTTCCCTTAATTGACTTGGGAAGAGACTTGAATTCTACTCCAGAAAGTTCTTTGATGGGACCTCCCAAGTTGACTTTAAAGGACCGAAGTGATAAATATGGAAACCGATACTTAAGCTTGTTCTACCGGGATGAGCCTGACATGCCTTTGATTGTTCCTAATCATTGGCTTGTTCCTGCTGTAGTTGCAGTCGCAGGGCTGTTGCTTCTTTTGAGTTTTTGGCGAATTAGACAGAAGCGACGACGTCGACGAAGAGGATCGGGATCTGCTGCACGTTTTTCCAATCTCTAG 3162 43.23 MIGYSISSSSISFFVIFVPIFISISVFQFNPSSDHTVFQTLTRNYSPNDPFTSKNVTDGNRVSQKNYIVRFVQYREAKEHRFYLESRIRSGGWKWIERRNPASKYPTDFGLVSIEDSVVMELVEEIEELELVKDVNVDASHVRGLLAEGGGRIGAFVDGKKRPGKIFTSMSFNEEGGERYTAISNASNRWGRHLLMQRSQVTSLFGADSLWAKGYTGSKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGGDEECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMTTWEMPHGNGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPESQRKTILNPASMKQALVEGAAKLAGPNMYEQGAGRVDLLESYEILKSYQPRASIFPGVLDYTDCPYTWPFCRQPLYAGAMPIIFNATILNGMGVIGYVEGQPTWNPSDEEGNLLSIHFTYSKVIWPWTGYIALHMQIKEEGAQFSGEIEGNVTLTVYSPPSRGEKNRRISTCVLQLKLKVVPTPPRSKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDARQYGTLLLVDLEDEYFKEEIEKLRDDVMITGLGLAVFSEWYNVETMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSIDGEQSRYASGTDIVRFPRGGYVHSFPFIDSSESGAAQSILTSSLSKADFPILGLLEAAEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSGNIRDPVLFTKFSKQNSPLYLEDNKLPSRRSDANFSLYSAVSGKELICMSDSRFEVWGTKGYSVQGRGRNRRLPGFPLIDLGRDLNSTPESSLMGPPKLTLKDRSDKYGNRYLSLFYRDEPDMPLIVPNHWLVPAVVAVAGLLLLLSFWRIRQKRRRRRRGSGSAARFSNL 1053
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3022141 3028089 - CmoCh10G006580.1 Cmo10g00658 390004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00658 1053 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 61 877 - -
Cmo10g00658 1053 PANTHER PEPTIDASE S8 61 877 - -
Cmo10g00658 1053 PRINTS Subtilisin serine protease family (S8) signature 217 236 IPR015500 -
Cmo10g00658 1053 PRINTS Subtilisin serine protease family (S8) signature 253 266 IPR015500 -
Cmo10g00658 1053 PRINTS Subtilisin serine protease family (S8) signature 420 436 IPR015500 -
Cmo10g00658 1053 Pfam Subtilase family 217 468 IPR000209 GO:0006508|GO:0008236
Cmo10g00658 1053 ProSitePatterns Serine proteases, subtilase family, histidine active site. 257 267 IPR022398 -
Cmo10g00658 1053 SUPERFAMILY Subtilisin-like 203 482 IPR036852 GO:0004252|GO:0006508
Cmo10g00658 1053 CDD Peptidases_S8_SKI-1_like 211 467 IPR034185 -
Cmo10g00658 1053 ProSitePatterns Serine proteases, subtilase family, serine active site. 421 431 IPR023828 -
Cmo10g00658 1053 Gene3D Peptidase S8/S53 domain 195 485 IPR036852 GO:0004252|GO:0006508
Cmo10g00658 1053 ProSiteProfiles Serine proteases, subtilase domain profile. 189 487 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00658 Cmo-Chr10:3022141 Cmo20g00753 Cmo-Chr20:3786305 6.69E-07 dispersed
Cmo10g00658 Cmo-Chr10:3022141 Cmo02g00248 Cmo-Chr2:1173478 4.37E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00658 K08653 - csv:101222509 1919.44