Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00696 ATGGACGAGGCCTCCGCCAACGACCTCCAACTCCACCGAGACGATTCACTGCACGACCTAGACCTCGCATCCACCAGTTCCGGTTTATCATCCATACTCAGCAGCGATGATTTCCGAAGCTCCTCCAGTTCCGGCGACATCTCCGTCACCAGCACTAGTTCCGGTGAGATTCCTGCTATTATTGTGGCCGAGGCCGCCCTGGATCCGAGGTCTGTTGAACTTACCACGTCGATGACCTCCACCACGGTGTTAGAACCGGCTAGACGGAAGTGCGTCGGGAGGAACAATAGGGCGGGACTGCACTGGGGACTCACTTCGGTTATCGGACGGCGGAAGGAGATGGAGGACGCTATAGCTGTTAAGCCTGGATTCATGTCTTCAAGATGCGATCACGTCGGAGGTTGTACGGCTCCAGGTTCCAGAACCTCCGGGGAGATCTCGCCCGTTCATTTCTTCGCCGTTTACGATGGTCACGGCGGCTCTCAGGTGGCCAATTTCTGTGCGGAGCGGATGCATGAAGTGATAGCGGAAGAGTGGGGAAGAGAAGGAATCAAAGGCCATGAATGGCAGAAAAAGTGGGAAGTTGCCCTATCTAATGGCTTCCAGAGGACTGATGATGAGGTCGTGTCAGAGGCGGTGGCAACCGACATGGTTGGATCCACTGCGGTTGTAGTCGTTCTATCTGGCTGCCAGATTATTGCATCCAATTGTGGCGACTCTCGGGCGGTTCTGTTCCAGAAAAATAAGGCGATTCCATTGACAGTCGATCAAAAGCCTGATAGACAGGACGAACTCCTGAGAATTGAAAGAGAGGGAGGCAAAGTCATCAACTGGATGGGGGCTAGAGTGCTTGGAGTTCTTGCTATGTCAAGAGCCATAGGGGATCGGTATCTTCGGCCATGGATAATTCCAGTGCCGGAAATTAGTTTCACAACGAGGAGCGACGAGGATGAATGTTTGGTTCTGGCAAGCGATGGGCTTTGGGATGTAATGACGAATGAAGAGGTTGGGCAGGTGGCTTGCCATCTTCTTAGGAGGCTCCGCAGGTCGTCGACACCTGATGACACCCCCCCGGCACAGATTGTGGCTAATAATCTCACTGAAATGGCCTATGGAAGAAACAGTTCCGATAACATTTCTGTTATTGTCATCGATCTGAAAGCAAGGAAAGCAAACCCACAGAGGTAA 1188 52.61 MDEASANDLQLHRDDSLHDLDLASTSSGLSSILSSDDFRSSSSSGDISVTSTSSGEIPAIIVAEAALDPRSVELTTSMTSTTVLEPARRKCVGRNNRAGLHWGLTSVIGRRKEMEDAIAVKPGFMSSRCDHVGGCTAPGSRTSGEISPVHFFAVYDGHGGSQVANFCAERMHEVIAEEWGREGIKGHEWQKKWEVALSNGFQRTDDEVVSEAVATDMVGSTAVVVVLSGCQIIASNCGDSRAVLFQKNKAIPLTVDQKPDRQDELLRIEREGGKVINWMGARVLGVLAMSRAIGDRYLRPWIIPVPEISFTTRSDEDECLVLASDGLWDVMTNEEVGQVACHLLRRLRRSSTPDDTPPAQIVANNLTEMAYGRNSSDNISVIVIDLKARKANPQR 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3188808 3192670 + CmoCh10G006960.1 Cmo10g00696 390042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00696 395 CDD PP2Cc 103 386 IPR001932 -
Cmo10g00696 395 ProSiteProfiles PPM-type phosphatase domain profile. 101 386 IPR001932 -
Cmo10g00696 395 Pfam Protein phosphatase 2C 104 379 IPR001932 -
Cmo10g00696 395 SUPERFAMILY PP2C-like 86 387 IPR036457 -
Cmo10g00696 395 PANTHER ALPHABET, ISOFORM E-RELATED 54 394 - -
Cmo10g00696 395 SMART PP2C_SIG_2 130 386 IPR001932 -
Cmo10g00696 395 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 54 394 - -
Cmo10g00696 395 Gene3D - 90 394 IPR036457 -
Cmo10g00696 395 SMART PP2C_4 91 384 IPR001932 -
Cmo10g00696 395 MobiDBLite consensus disorder prediction 28 52 - -
Cmo10g00696 395 ProSitePatterns PPM-type phosphatase domain signature. 151 159 IPR000222 GO:0043169
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00696 Cmo11g00656 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00696 Cmo-Chr10:3188808 Cmo12g00591 Cmo-Chr12:3625701 1.00E-88 dispersed
Cmo01g00655 Cmo-Chr1:3349903 Cmo10g00696 Cmo-Chr10:3188808 6.35E-75 transposed
Cmo10g00696 Cmo-Chr10:3188808 Cmo11g00656 Cmo-Chr11:3152471 0 wgd
Cmo10g00696 Cmo-Chr10:3188808 Cmo17g00734 Cmo-Chr17:7322476 3.09E-28 wgd
Cmo10g00696 Cmo-Chr10:3188808 Cmo08g00699 Cmo-Chr8:4443521 1.83E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00696 K14497 - csv:101220173 631.328