Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00703 ATGTCGAGACTGCTGCGGCCTCCTCCTCCTCTTCTTGTTCTTGTTCTTTTGCTGAGCCAGAGTCTCACCCTAACGCACTGCCATACCAAGGGGCTCAAACCCAAGACCTCGCCCAAGACCGTTCTTCCCGAGAATTCGACCACAACCCAATTCTCAGAGCAGCAATTTATGAAATGGGTCAAATTTGTCGGCAGTCTCCGACACTCTGTTTTTAGAACGGCGAAGAACAACCTTTTTCCTTCTTATACTCTCCATGTGGCTAAGAATCCGGCTGTCGGGGACTTCACGTCGATCCAAGACGCCATCGATTCCCTCCCTTCAATCAATTTGGTTAGAGTCGTCATCAAGGTTCATGAAGGTGTATACACAGAGAAGGTGAACATACCCCCGTTGAAATCATTCATAACAATCCAAGGAGCAGGGGCTGACAAAACGATTGTTCAATGGGGAGACACCGCACAAACACCAGGCCCAAAGGGGCAGCCAATGGGGACTTACAACTCCGCAACATTCGCAGTAAATTCCCCTTATTTCATAGCCAAAAACATCACATTCAAGAACACAACCCCTGTTCCAGCACCAGGGGCAATCGGGAAACAGGCGGTGGCGTTCAGAATCTCGGCGGACACAGCAGCATTCTACGGCTGCAGATTCTTGGGAGCTCAGGACACACTATACGACCATTTGGGTCGGCATTATTACAAGGATTGTTACATAGAAGGGTCGGTGGACTTCATATTCGGAAACGGGCTGTCTCTGTTCGAGGGATGTCACGTGCACGCAATAGCGCAGAACGCAGGAGCGTTGACAGCGCAGGGGAGAAGCAGCCTGCTGGAGGACACAGGGTTCTCGTTCGTAAACTGTAAGGTCACGGGGTCTGGAGCGCTATACTTAGGGAGGGCATGGGGGCCCTTCTCTAGGGTCGTCTTCGCTTACACCTATATGGACAACATTATTCTCCCCAAAGGCTGGTACAACTGGGGCGATCCCAGCCGCGAAATGACGGTGTTTTATGGGCAATACAAATGTACAGGCGAAGGAGCTAGCTTTGCCGGCAGAGTTTCATGGTCGAGAGAGCTCACTGATGAAGAAGCCAAGCCCTTCATTTCCCTTACCTTCATTGATGGCTCTGAATGGATCAAAATCTAA 1149 50.57 MSRLLRPPPPLLVLVLLLSQSLTLTHCHTKGLKPKTSPKTVLPENSTTTQFSEQQFMKWVKFVGSLRHSVFRTAKNNLFPSYTLHVAKNPAVGDFTSIQDAIDSLPSINLVRVVIKVHEGVYTEKVNIPPLKSFITIQGAGADKTIVQWGDTAQTPGPKGQPMGTYNSATFAVNSPYFIAKNITFKNTTPVPAPGAIGKQAVAFRISADTAAFYGCRFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNGLSLFEGCHVHAIAQNAGALTAQGRSSLLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIILPKGWYNWGDPSREMTVFYGQYKCTGEGASFAGRVSWSRELTDEEAKPFISLTFIDGSEWIKI 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3224522 3226398 - CmoCh10G007030.1 Cmo10g00703 390049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00703 382 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
Cmo10g00703 382 Gene3D - 80 382 IPR012334 -
Cmo10g00703 382 SUPERFAMILY Pectin lyase-like 79 381 IPR011050 -
Cmo10g00703 382 PANTHER PECTINESTERASE 9 381 - -
Cmo10g00703 382 Pfam Pectinesterase 91 376 IPR000070 GO:0030599|GO:0042545
Cmo10g00703 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 9 381 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00703 Cmo11g00665 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00823 Cmo-Chr4:4101295 Cmo10g00703 Cmo-Chr10:3224522 2.87E-169 dispersed
Cmo10g00703 Cmo-Chr10:3224522 Cmo14g00235 Cmo-Chr14:1081221 1.95E-94 dispersed
Cmo12g00413 Cmo-Chr12:2544176 Cmo10g00703 Cmo-Chr10:3224522 4.19E-74 dispersed
Cmo14g01618 Cmo-Chr14:12855319 Cmo10g00703 Cmo-Chr10:3224522 5.98E-78 dispersed
Cmo15g01181 Cmo-Chr15:8208820 Cmo10g00703 Cmo-Chr10:3224522 7.65E-86 dispersed
Cmo01g00289 Cmo-Chr1:1373009 Cmo10g00703 Cmo-Chr10:3224522 8.01E-40 transposed
Cmo10g00818 Cmo-Chr10:3825599 Cmo10g00703 Cmo-Chr10:3224522 1.83E-90 transposed
Cmo17g00992 Cmo-Chr17:8568769 Cmo10g00703 Cmo-Chr10:3224522 1.27E-103 transposed
Cmo15g00263 Cmo-Chr15:1272040 Cmo10g00703 Cmo-Chr10:3224522 6.67E-92 transposed
Cmo10g00703 Cmo-Chr10:3224522 Cmo11g00665 Cmo-Chr11:3199173 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00703 K01051 - csv:101215894 700.279