Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g00745 | ATGGAGGCTCTTCTTCCGCTGCTGATTCTTTGTGTCGTTGCTGCTAATGCGTCCGACCTTCGGGAAATCGCAGCTTCACTCGGTGCTCCTACCGTGTCGCCGCCGGTTAATAGCATGCCTCAGCCGCCTTCACCAGTTCAACCCAGTTCCCGGCGTGACCAAACAAGCAATTCATCACCGAATGTAGCTCCAATCCCCGACCCAATTTCTCCAGAGCCTAATATCCCTCCAGTAGTTGCTATTTCGCCCAAAGCTGATGACATAAAGAGCTTAGAAGCACCAGTAGCTACACCTTCTAATGCATTGCCTAAGTATATGCTACCTGTGAATCATTCCCCAAAGGAAGCTCCTTCTACTCGCAATGACATGGGACGTTCTCGTGACACTCAACGGCCGATCGTTCCACCGCGAAAAGCTCCGTTTCGTAGAGGAAATCTTTCTCCAACATCTCCTGTGCCTTCAAATTATAAGCATCATAGAAGGAGGAATCATATCATTAGTCACGCACCTGCACCTGCACCTGCACCGTCATATCCGATTTCATCCCGTGCGATAGAAACGTCAGGACCAGTTGTTTCCACGGCACAACATTCACACGAGAGAGGAGACTACGCTCCACCTATGGAGTCAGATCCTTCGTCGATATCTCCTTCACATTATGATCGTCTACCGCTTGTGACTCATGTTTCGCCTTCTCCTTCACCATACCAGAAAATGTCTGGTCATACTGAAAGACATTTTTATCCCCCTAAAGCTTCACCTTCACCCTTGAAACCTTGGGCAAAAAGCCCGAAGATGCCACCGCTGCGACCGATACATACATTGCCTCCTCCACCTCCCAATGAAGATTGTTCAGCTACCCAGTGCACCGAGCCATATACAAACACTCCCCCAGGATCTCCCTGCGGTTGTGTTTGGCCCATGCAAATTGGACTTCGCCTCAGCGTTTCGCTATATACGTTCTTCCCCCTGGTTTCGGAGCTGGCAGCAGAAATTGCTGCTGGGGTGTTCGTAAAGCAAAGCCAAGTACGCGTCATTGGAGCTAATGCAGCTAACCAGCAACCAGATAAGACTGTTGTTCTTATTGACTTAGTCCCACTTGGGGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAGAAAGTTTCTGTCAAAGCTTCCTATTTTGGGAAATATGAAGTATTATACGTTCGATATCCGGGTTTACCTCAATCACCTCCTTCTGGAGATTCAGGAATAGATAATGAGCCTTATTATAGTAATAGTAACGATGCAAGGACGGTTAAACCGATTGGCGTCGATGTACAGAACATACAGCACAAAGACAGGATAAGTGGTGGTATGATTGCCATTATTGCTCTATCAACTACTGTTGCAGTCGTCTTATGTGTTGCGACTGCTTGGATTTTGCTCCTCAGACGCAACGATGGCGTTTGTCAGCAGAAACCAACTCCACATGCTTTGGTATCTTCCCTCAATAAACCATCAGGTGCTGGTGGATCAGTCATGGCAGCCATGCCTAGTTCTGCTTCTTTATCCTTTGGATCTAGCATTGCCCCATATTCAGGATCAGCCAAGACATTCAGTGCCTCAGACATAGAGAGAGCCACCAATAATTTTGACCCTTCAAGGATATTAGGGGAGGGTGGCTTTGGACGTGTTTACAGAGGCACTCTCGAAGACGATACCGAAGTAGCAGTTAAAGTTCTCAAGAGAGATGATCATCAGGGCGGTCGAGAATTCTTGGCTGAAGTCGAAATGCTTAGCCGTCTTCACCATAGAAACTTGGTCAAGTTGATTGGAATATGTACTGAGGAGGGTAGCCGCTCCCTGGTGTATGAACTTATTCCAAATGGCAGTGTGGAATCTCACTTACATGATGTTGATAAGGAAACTGCCCCACTTGATTGGGACGCTCGGATGAAGATAGCACTTGGCGCTGCTCGGGGTTTATCCTATCTACACGAGGATTCGAGTCCGAGAGTCATACATCGAGACTTCAAATCCAGCAATATCTTATTAGAACATGATTTTACACCAAAAGTTTCGGACTTTGGCTTGGCTAGAACGGCAATGGATGAGGAAAGCAGACACATTTCGACACGCGTCATGGGAACTTTCGGATATGTGGCTCCGGAATATGCGATGACGGGGCATTTACTTGTGAAGAGTGATGTTTATAGCTACGGGGTCGTTCTTCTTGAGCTATTAACAGGGAGGAAACCGGTTGACATGTCGCAACCGCCTGGTGAAGAAAATCTTGTTGCTTGGGCTCGTCCACTACTCACGAGCAAAGAAGGTCTAGATGTTATAATTGACAAATCGCTTGATTCTAGTGTTCCTTTTGAAAATATTGCCAAAGTGGCTGCCATTGCTTCAATGTGTGTGCAACCAGAGGTGTCACATCGACCTTTCATGGGCGAGGTCGTTCAAGCTTTGAAACTAGTATGCAACCAATGCAATGATGCTCGAGAAGCAATCTCACAAGCTGGTTCAAGCCTAGATAATTCATCTTTGGAGATGAATGACGAGACATTGAGTTCAAGATACATGCTAGACTCTTTTCGTAGCGAATATTTAGTATCTGGCTCAATATCAGGTCTTGATGTCATCGATACACGTCTCTCAATCTCGGGTATGTTAAATACTTCAATTGGAATCGGAATGCTAGAATCTAGATCACTCGAAAGATGCTTAAGTTCTAGTCCTCTTCGAAACGGGAAAGGTAAGAGGCACTTCTGGCAAAGAATGAGAAGATACTCTGGAAGTAGCATCAGTGAACATGGAATGCCTAGATTATGGTCCGGTTCTACCTAA | 2835 | 46.03 | MEALLPLLILCVVAANASDLREIAASLGAPTVSPPVNSMPQPPSPVQPSSRRDQTSNSSPNVAPIPDPISPEPNIPPVVAISPKADDIKSLEAPVATPSNALPKYMLPVNHSPKEAPSTRNDMGRSRDTQRPIVPPRKAPFRRGNLSPTSPVPSNYKHHRRRNHIISHAPAPAPAPSYPISSRAIETSGPVVSTAQHSHERGDYAPPMESDPSSISPSHYDRLPLVTHVSPSPSPYQKMSGHTERHFYPPKASPSPLKPWAKSPKMPPLRPIHTLPPPPPNEDCSATQCTEPYTNTPPGSPCGCVWPMQIGLRLSVSLYTFFPLVSELAAEIAAGVFVKQSQVRVIGANAANQQPDKTVVLIDLVPLGEKFDNTTAFLTYQRFWHKKVSVKASYFGKYEVLYVRYPGLPQSPPSGDSGIDNEPYYSNSNDARTVKPIGVDVQNIQHKDRISGGMIAIIALSTTVAVVLCVATAWILLLRRNDGVCQQKPTPHALVSSLNKPSGAGGSVMAAMPSSASLSFGSSIAPYSGSAKTFSASDIERATNNFDPSRILGEGGFGRVYRGTLEDDTEVAVKVLKRDDHQGGREFLAEVEMLSRLHHRNLVKLIGICTEEGSRSLVYELIPNGSVESHLHDVDKETAPLDWDARMKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGEENLVAWARPLLTSKEGLDVIIDKSLDSSVPFENIAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNQCNDAREAISQAGSSLDNSSLEMNDETLSSRYMLDSFRSEYLVSGSISGLDVIDTRLSISGMLNTSIGIGMLESRSLERCLSSSPLRNGKGKRHFWQRMRRYSGSSISEHGMPRLWSGST | 944 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3433113 | 3438312 | - | CmoCh10G007450.1 | Cmo10g00745 | 390091 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g00745 | 944 | MobiDBLite | consensus disorder prediction | 64 | 78 | - | - | |
Cmo10g00745 | 944 | Gene3D | Transferase(Phosphotransferase) domain 1 | 622 | 843 | - | - | |
Cmo10g00745 | 944 | CDD | STKc_IRAK | 552 | 820 | - | - | |
Cmo10g00745 | 944 | MobiDBLite | consensus disorder prediction | 188 | 283 | - | - | |
Cmo10g00745 | 944 | Gene3D | Phosphorylase Kinase; domain 1 | 522 | 621 | - | - | |
Cmo10g00745 | 944 | Pfam | Protein tyrosine and serine/threonine kinase | 550 | 819 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo10g00745 | 944 | ProSiteProfiles | Protein kinase domain profile. | 546 | 822 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo10g00745 | 944 | MobiDBLite | consensus disorder prediction | 101 | 157 | - | - | |
Cmo10g00745 | 944 | PANTHER | OS01G0750732 PROTEIN | 93 | 943 | - | - | |
Cmo10g00745 | 944 | MobiDBLite | consensus disorder prediction | 48 | 63 | - | - | |
Cmo10g00745 | 944 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 668 | 680 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo10g00745 | 944 | ProSitePatterns | Protein kinases ATP-binding region signature. | 552 | 574 | IPR017441 | GO:0005524 | |
Cmo10g00745 | 944 | MobiDBLite | consensus disorder prediction | 252 | 283 | - | - | |
Cmo10g00745 | 944 | SUPERFAMILY | Protein kinase-like (PK-like) | 525 | 819 | IPR011009 | - | |
Cmo10g00745 | 944 | MobiDBLite | consensus disorder prediction | 30 | 80 | - | - | |
Cmo10g00745 | 944 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 93 | 943 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00745 | Cmo11g00708 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01752 | Cmo-Chr2:10027464 | Cmo10g00745 | Cmo-Chr10:3433113 | 0 | dispersed | |
Cmo10g00745 | Cmo-Chr10:3433113 | Cmo19g00148 | Cmo-Chr19:815151 | 0 | dispersed | |
Cmo10g00745 | Cmo-Chr10:3433113 | Cmo11g00708 | Cmo-Chr11:3418297 | 9.34E-07 | wgd | |
Cmo10g00745 | Cmo-Chr10:3433113 | Cmo17g00697 | Cmo-Chr17:7083257 | 0 | wgd | |
Cmo10g00745 | Cmo-Chr10:3433113 | Cmo08g00740 | Cmo-Chr8:4690171 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74622 | PF07714 | PK_Tyr_Ser-Thr | 3.40E-50 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g00745 | - | - | cpep:111780726 | 1769.21 |