Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00745 ATGGAGGCTCTTCTTCCGCTGCTGATTCTTTGTGTCGTTGCTGCTAATGCGTCCGACCTTCGGGAAATCGCAGCTTCACTCGGTGCTCCTACCGTGTCGCCGCCGGTTAATAGCATGCCTCAGCCGCCTTCACCAGTTCAACCCAGTTCCCGGCGTGACCAAACAAGCAATTCATCACCGAATGTAGCTCCAATCCCCGACCCAATTTCTCCAGAGCCTAATATCCCTCCAGTAGTTGCTATTTCGCCCAAAGCTGATGACATAAAGAGCTTAGAAGCACCAGTAGCTACACCTTCTAATGCATTGCCTAAGTATATGCTACCTGTGAATCATTCCCCAAAGGAAGCTCCTTCTACTCGCAATGACATGGGACGTTCTCGTGACACTCAACGGCCGATCGTTCCACCGCGAAAAGCTCCGTTTCGTAGAGGAAATCTTTCTCCAACATCTCCTGTGCCTTCAAATTATAAGCATCATAGAAGGAGGAATCATATCATTAGTCACGCACCTGCACCTGCACCTGCACCGTCATATCCGATTTCATCCCGTGCGATAGAAACGTCAGGACCAGTTGTTTCCACGGCACAACATTCACACGAGAGAGGAGACTACGCTCCACCTATGGAGTCAGATCCTTCGTCGATATCTCCTTCACATTATGATCGTCTACCGCTTGTGACTCATGTTTCGCCTTCTCCTTCACCATACCAGAAAATGTCTGGTCATACTGAAAGACATTTTTATCCCCCTAAAGCTTCACCTTCACCCTTGAAACCTTGGGCAAAAAGCCCGAAGATGCCACCGCTGCGACCGATACATACATTGCCTCCTCCACCTCCCAATGAAGATTGTTCAGCTACCCAGTGCACCGAGCCATATACAAACACTCCCCCAGGATCTCCCTGCGGTTGTGTTTGGCCCATGCAAATTGGACTTCGCCTCAGCGTTTCGCTATATACGTTCTTCCCCCTGGTTTCGGAGCTGGCAGCAGAAATTGCTGCTGGGGTGTTCGTAAAGCAAAGCCAAGTACGCGTCATTGGAGCTAATGCAGCTAACCAGCAACCAGATAAGACTGTTGTTCTTATTGACTTAGTCCCACTTGGGGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAGAAAGTTTCTGTCAAAGCTTCCTATTTTGGGAAATATGAAGTATTATACGTTCGATATCCGGGTTTACCTCAATCACCTCCTTCTGGAGATTCAGGAATAGATAATGAGCCTTATTATAGTAATAGTAACGATGCAAGGACGGTTAAACCGATTGGCGTCGATGTACAGAACATACAGCACAAAGACAGGATAAGTGGTGGTATGATTGCCATTATTGCTCTATCAACTACTGTTGCAGTCGTCTTATGTGTTGCGACTGCTTGGATTTTGCTCCTCAGACGCAACGATGGCGTTTGTCAGCAGAAACCAACTCCACATGCTTTGGTATCTTCCCTCAATAAACCATCAGGTGCTGGTGGATCAGTCATGGCAGCCATGCCTAGTTCTGCTTCTTTATCCTTTGGATCTAGCATTGCCCCATATTCAGGATCAGCCAAGACATTCAGTGCCTCAGACATAGAGAGAGCCACCAATAATTTTGACCCTTCAAGGATATTAGGGGAGGGTGGCTTTGGACGTGTTTACAGAGGCACTCTCGAAGACGATACCGAAGTAGCAGTTAAAGTTCTCAAGAGAGATGATCATCAGGGCGGTCGAGAATTCTTGGCTGAAGTCGAAATGCTTAGCCGTCTTCACCATAGAAACTTGGTCAAGTTGATTGGAATATGTACTGAGGAGGGTAGCCGCTCCCTGGTGTATGAACTTATTCCAAATGGCAGTGTGGAATCTCACTTACATGATGTTGATAAGGAAACTGCCCCACTTGATTGGGACGCTCGGATGAAGATAGCACTTGGCGCTGCTCGGGGTTTATCCTATCTACACGAGGATTCGAGTCCGAGAGTCATACATCGAGACTTCAAATCCAGCAATATCTTATTAGAACATGATTTTACACCAAAAGTTTCGGACTTTGGCTTGGCTAGAACGGCAATGGATGAGGAAAGCAGACACATTTCGACACGCGTCATGGGAACTTTCGGATATGTGGCTCCGGAATATGCGATGACGGGGCATTTACTTGTGAAGAGTGATGTTTATAGCTACGGGGTCGTTCTTCTTGAGCTATTAACAGGGAGGAAACCGGTTGACATGTCGCAACCGCCTGGTGAAGAAAATCTTGTTGCTTGGGCTCGTCCACTACTCACGAGCAAAGAAGGTCTAGATGTTATAATTGACAAATCGCTTGATTCTAGTGTTCCTTTTGAAAATATTGCCAAAGTGGCTGCCATTGCTTCAATGTGTGTGCAACCAGAGGTGTCACATCGACCTTTCATGGGCGAGGTCGTTCAAGCTTTGAAACTAGTATGCAACCAATGCAATGATGCTCGAGAAGCAATCTCACAAGCTGGTTCAAGCCTAGATAATTCATCTTTGGAGATGAATGACGAGACATTGAGTTCAAGATACATGCTAGACTCTTTTCGTAGCGAATATTTAGTATCTGGCTCAATATCAGGTCTTGATGTCATCGATACACGTCTCTCAATCTCGGGTATGTTAAATACTTCAATTGGAATCGGAATGCTAGAATCTAGATCACTCGAAAGATGCTTAAGTTCTAGTCCTCTTCGAAACGGGAAAGGTAAGAGGCACTTCTGGCAAAGAATGAGAAGATACTCTGGAAGTAGCATCAGTGAACATGGAATGCCTAGATTATGGTCCGGTTCTACCTAA 2835 46.03 MEALLPLLILCVVAANASDLREIAASLGAPTVSPPVNSMPQPPSPVQPSSRRDQTSNSSPNVAPIPDPISPEPNIPPVVAISPKADDIKSLEAPVATPSNALPKYMLPVNHSPKEAPSTRNDMGRSRDTQRPIVPPRKAPFRRGNLSPTSPVPSNYKHHRRRNHIISHAPAPAPAPSYPISSRAIETSGPVVSTAQHSHERGDYAPPMESDPSSISPSHYDRLPLVTHVSPSPSPYQKMSGHTERHFYPPKASPSPLKPWAKSPKMPPLRPIHTLPPPPPNEDCSATQCTEPYTNTPPGSPCGCVWPMQIGLRLSVSLYTFFPLVSELAAEIAAGVFVKQSQVRVIGANAANQQPDKTVVLIDLVPLGEKFDNTTAFLTYQRFWHKKVSVKASYFGKYEVLYVRYPGLPQSPPSGDSGIDNEPYYSNSNDARTVKPIGVDVQNIQHKDRISGGMIAIIALSTTVAVVLCVATAWILLLRRNDGVCQQKPTPHALVSSLNKPSGAGGSVMAAMPSSASLSFGSSIAPYSGSAKTFSASDIERATNNFDPSRILGEGGFGRVYRGTLEDDTEVAVKVLKRDDHQGGREFLAEVEMLSRLHHRNLVKLIGICTEEGSRSLVYELIPNGSVESHLHDVDKETAPLDWDARMKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGEENLVAWARPLLTSKEGLDVIIDKSLDSSVPFENIAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNQCNDAREAISQAGSSLDNSSLEMNDETLSSRYMLDSFRSEYLVSGSISGLDVIDTRLSISGMLNTSIGIGMLESRSLERCLSSSPLRNGKGKRHFWQRMRRYSGSSISEHGMPRLWSGST 944
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3433113 3438312 - CmoCh10G007450.1 Cmo10g00745 390091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00745 944 MobiDBLite consensus disorder prediction 64 78 - -
Cmo10g00745 944 Gene3D Transferase(Phosphotransferase) domain 1 622 843 - -
Cmo10g00745 944 CDD STKc_IRAK 552 820 - -
Cmo10g00745 944 MobiDBLite consensus disorder prediction 188 283 - -
Cmo10g00745 944 Gene3D Phosphorylase Kinase; domain 1 522 621 - -
Cmo10g00745 944 Pfam Protein tyrosine and serine/threonine kinase 550 819 IPR001245 GO:0004672|GO:0006468
Cmo10g00745 944 ProSiteProfiles Protein kinase domain profile. 546 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00745 944 MobiDBLite consensus disorder prediction 101 157 - -
Cmo10g00745 944 PANTHER OS01G0750732 PROTEIN 93 943 - -
Cmo10g00745 944 MobiDBLite consensus disorder prediction 48 63 - -
Cmo10g00745 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Cmo10g00745 944 ProSitePatterns Protein kinases ATP-binding region signature. 552 574 IPR017441 GO:0005524
Cmo10g00745 944 MobiDBLite consensus disorder prediction 252 283 - -
Cmo10g00745 944 SUPERFAMILY Protein kinase-like (PK-like) 525 819 IPR011009 -
Cmo10g00745 944 MobiDBLite consensus disorder prediction 30 80 - -
Cmo10g00745 944 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 93 943 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00745 Cmo11g00708 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01752 Cmo-Chr2:10027464 Cmo10g00745 Cmo-Chr10:3433113 0 dispersed
Cmo10g00745 Cmo-Chr10:3433113 Cmo19g00148 Cmo-Chr19:815151 0 dispersed
Cmo10g00745 Cmo-Chr10:3433113 Cmo11g00708 Cmo-Chr11:3418297 9.34E-07 wgd
Cmo10g00745 Cmo-Chr10:3433113 Cmo17g00697 Cmo-Chr17:7083257 0 wgd
Cmo10g00745 Cmo-Chr10:3433113 Cmo08g00740 Cmo-Chr8:4690171 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74622 PF07714 PK_Tyr_Ser-Thr 3.40E-50 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00745 - - cpep:111780726 1769.21