Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00764 ATGGAGGATCATCGGAAGGTTGAAGCCGAGGAAGAAGACGAAGTGGGAACCGCCGCCGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAATCGGAGTTGTGGGTTCGAGCTTGACTCTGGAGAAGGTGGCTGCAGCCAAACAGTTCATTGAGAATCATTACAAGGCTCAAAAAAAGCACATTCAAGAACGCAAAGAGAGGCGTTCCGTTCTCGAAAAGAAGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATTAATCTATTGAAAGATTTGGAGCTCAAGGAGACTCAATACATGAGGCTGAAAAGGCATAAAATTTGTGTCGAGGATTTCGACCTTTTGACGATTATTGGTCGAGGTGCTTTCGGGGAGGTCAGACTATGTCGGGAGAAGAAAACAGGCAACATCTATGCCATGAAGAAGCTGAAGAAATCAGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCAGAAGTTGCAAGTCACTGCATTGTGAAACTCTATTATTCCTTCCAAGATGCTGAATACTTGTATCTGATCATGGAGTATCTTCCAGGAGGTGACATGATGACTTTACTGATAAGGGAGGAAACTTTGACAGAAACCGTGGCTAGATTTTACGTCGCCCAAACTGTTTTGGCTATAGAGTCGATTCATAAACATAACTACATCCACAGAGATATAAAACCTGATAACCTTCTATTGGACAAAAGGGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGCACAAATCTATCTTCTATAAATGAAAATGAAGTCCTTGACGACGAAAACTTGCCTGACACGGTGGACGTGGACGAGAGCTTTCCAGATAAGAAAAGCGGGAGGCGTTGGAAGAGCCCCCTCGAACAACTTCAGCACTGGCAGATTAACAGAAGGAAACTGGCGTTTTCCACGGTTGGCACTCCAGATTACATAGCTCCAGAAGTGCTGCTAAAAAAAGGATATGATGTGGAATGTGACTGGTGGTCTCTTGGTGCAATAACGTACGAAATGCTTGTCGGTTATCCGCCATTTTATTCTGATGATCCAATAACAACATGCCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCTGATGAGTCAAGATTATCACCTGAAGCAAAAGACATGATCAGCAGGCTGCTTTGCAATGCTGAGCATAGGCTTGGTACTGGAGGCGCAGAACAAATCAAGGCTCATCCTTGGTTTAAACATACCGAGTGGGACAAACTCTATGACATCGATGCAGCATTTAAGCCCGAGGTCAACGACGAACTCGATACGCAGAATTTTATGCAGTTTGATGAGGTCGATCCACCGCCAACTAGAACCGGATCTGGACCAATAAGGAAGATGTTGTTGACTCCCAAAGATCTCAGTTTTGTTGGTTATACATACAAAAATTTTGAAGCTGTCAAAGGACTACACCATTCATTTGATTTGAAATCGAGCACCACCCTGACTCGGACTTCGTCAGTTGACTCGACTAAAAGTGACTCGGCATTGATCAACTACTCAACAGAGGACAGGGAAGCCATATTGGCACCATCAGGGGATGCTTTGTCACAGTAA 1626 44.16 MEDHRKVEAEEEDEVGTAAVEEEEEEEEEEEEIGVVGSSLTLEKVAAAKQFIENHYKAQKKHIQERKERRSVLEKKLASSDVSEEEQINLLKDLELKETQYMRLKRHKICVEDFDLLTIIGRGAFGEVRLCREKKTGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVARFYVAQTVLAIESIHKHNYIHRDIKPDNLLLDKRGHMKLSDFGLCKPLDCTNLSSINENEVLDDENLPDTVDVDESFPDKKSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYDVECDWWSLGAITYEMLVGYPPFYSDDPITTCRKIVHWKNHLKFPDESRLSPEAKDMISRLLCNAEHRLGTGGAEQIKAHPWFKHTEWDKLYDIDAAFKPEVNDELDTQNFMQFDEVDPPPTRTGSGPIRKMLLTPKDLSFVGYTYKNFEAVKGLHHSFDLKSSTTLTRTSSVDSTKSDSALINYSTEDREAILAPSGDALSQ 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3533326 3543482 + CmoCh10G007640.1 Cmo10g00764 390110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00764 541 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 521 - -
Cmo10g00764 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Cmo10g00764 541 Gene3D Phosphorylase Kinase; domain 1 440 450 - -
Cmo10g00764 541 MobiDBLite consensus disorder prediction 1 35 - -
Cmo10g00764 541 Gene3D Transferase(Phosphotransferase) domain 1 320 439 - -
Cmo10g00764 541 ProSiteProfiles AGC-kinase C-terminal domain profile. 422 494 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cmo10g00764 541 Pfam Protein kinase C terminal domain 440 484 IPR017892 GO:0004674|GO:0005524|GO:0006468
Cmo10g00764 541 Gene3D Transferase(Phosphotransferase) domain 1 198 265 - -
Cmo10g00764 541 Pfam Protein kinase domain 314 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00764 541 Pfam Protein kinase domain 116 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00764 541 CDD STKc_NDR_like 112 485 - -
Cmo10g00764 541 ProSiteProfiles Protein kinase domain profile. 114 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00764 541 SMART serkin_6 114 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00764 541 SMART pkinase_C_6 422 486 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cmo10g00764 541 SUPERFAMILY Protein kinase-like (PK-like) 96 470 IPR011009 -
Cmo10g00764 541 MobiDBLite consensus disorder prediction 14 34 - -
Cmo10g00764 541 Gene3D Phosphorylase Kinase; domain 1 73 197 - -
Cmo10g00764 541 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 21 521 - -
Cmo10g00764 541 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00764 Cmo11g00724 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00764 Cmo-Chr10:3533326 Cmo17g00156 Cmo-Chr17:904544 0 dispersed
Cmo01g01793 Cmo-Chr1:13215370 Cmo10g00764 Cmo-Chr10:3533326 0 wgd
Cmo10g00764 Cmo-Chr10:3533326 Cmo11g00724 Cmo-Chr11:3495011 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74623 PF00069 Pkinase 9.30E-44 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00764 K08790 - csv:101208238 938.717