Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00767 ATGAGGAAGGGAGGCTTCAGCAACAACCTCAACCTCAAGCTCAATCTCCCTCAAGATGACCAATCCATAGCGAAGTTCCTAACGCAGAGCGGCACGTTTAAGGATGGCGATCTGCTCGTAAACAGAGATGGGGTTCGGATTGTTTCCAAGAGTGAAGTTGAAGCACCACCTCCGATTAAGCCTACCGATGATCAGCTGAGTTTAGCGGACATAGACATAATTAAAGTCATTGGAAAAGGAAATGGTGGAACCGTGCAATTAGTTCAGCACAAATGGACTGCTCAGTTTTTTGCATTGAAGGTAATTCAGATGAAAATTGAGGAGTCTCACCGCAAGCAGATTGCACAAGAATTGAAAATCAATCAATCAGCGCAGTGCCCTTATATAGTTGTCTGTTACCAATCTTTCTATGATAATGGCTCTATATATATCATCCTAGAGTACATGGATGGAGGTTCTTTAGCAGATTTCTTGAAAAAGGTTAAACAAGTTCAAGAACCATATCTTGCTGCCCTTTGTAAGCAGGTGCTGAAGGGGTTGTCATACCTTCACCATGAACGACACATCATTCATCGGGACTTAAAGCCTTCTAATTTATTAATAAATCATAGAGGGGAAGTCAAGATTACTGACTTTGGTGTCAGTGCGATTATGGCAAGCACATATGGAGAGGCTAATACTTTTGTTGGCACGTATAACTATATGTCTCCAGAGAGAATTATTGGAGAAAAATATGATAATAAAAGTGACATTTGGAGCTTGGGCCTGATATTTCTCGAGTGTGCAACCGGAAAATTTCCTTATTCCCCACCAGAGCAAGAGGGAGGATGGGTTAATTTTTATGAGCTTATGGAAGCCATTGTTGAGGGCGAACCTCCTTCTGCTCCGGCTGACCAATTTACTCCCAACTTCTGTTCGTTCATTTCTGCATGGAATTTGCATCTTGTGCAAAAGGACCCAAGGGATAGACTGTCAGCACGTGAACTTTTGGAACATCCTTTCATCAAGATGTATGAAGATACAGATATTGACCTGTCATCTTACTTCAATGATGCAGGGTCTCCACTTGCAACTTTCTAA 1080 41.85 MRKGGFSNNLNLKLNLPQDDQSIAKFLTQSGTFKDGDLLVNRDGVRIVSKSEVEAPPPIKPTDDQLSLADIDIIKVIGKGNGGTVQLVQHKWTAQFFALKVIQMKIEESHRKQIAQELKINQSAQCPYIVVCYQSFYDNGSIYIILEYMDGGSLADFLKKVKQVQEPYLAALCKQVLKGLSYLHHERHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTYGEANTFVGTYNYMSPERIIGEKYDNKSDIWSLGLIFLECATGKFPYSPPEQEGGWVNFYELMEAIVEGEPPSAPADQFTPNFCSFISAWNLHLVQKDPRDRLSARELLEHPFIKMYEDTDIDLSSYFNDAGSPLATF 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3558589 3561968 - CmoCh10G007670.1 Cmo10g00767 390113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00767 359 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Cmo10g00767 359 PANTHER MAP KINASE KINASE 9 358 - -
Cmo10g00767 359 SMART serkin_6 71 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00767 359 CDD PKc_MAPKK_plant_like 69 339 - -
Cmo10g00767 359 SUPERFAMILY Protein kinase-like (PK-like) 56 341 IPR011009 -
Cmo10g00767 359 Gene3D Phosphorylase Kinase; domain 1 47 150 - -
Cmo10g00767 359 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 9 358 - -
Cmo10g00767 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Cmo10g00767 359 ProSiteProfiles Protein kinase domain profile. 71 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g00767 359 Gene3D Transferase(Phosphotransferase) domain 1 151 355 - -
Cmo10g00767 359 Pfam Protein kinase domain 73 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00767 Cmo11g00726 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00767 Cmo-Chr10:3558589 Cmo13g01011 Cmo-Chr13:8596536 1.43E-64 dispersed
Cmo12g01310 Cmo-Chr12:11475316 Cmo10g00767 Cmo-Chr10:3558589 1.85E-135 transposed
Cmo14g00685 Cmo-Chr14:3500450 Cmo10g00767 Cmo-Chr10:3558589 1.22E-74 transposed
Cmo10g00767 Cmo-Chr10:3558589 Cmo11g00726 Cmo-Chr11:3514026 0 wgd
Cmo10g00767 Cmo-Chr10:3558589 Cmo12g01353 Cmo-Chr12:11669407 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74624 PF00069 Pkinase 3.40E-68 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00767 K20603 - csv:101204545 677.167