Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00784 ATGAGATCAAGGCCTTTTTTTGTCTGTAAAAGCACAAAAATGGAGTACTTTGTGTTCTATTCATTGGCACTTTGCTTGGTTGTTTTTGGAGTGGCAAAAGCTTTCTACTCCATTTGGTGGAGACCCAAATTGGTGGAGAGACAGTTGAAAAGACAAGGAGTTAGGGGCAGTTCCTACAAGCCTTTGGTTGGTGATGCCAAAGAGTATGTGAGCATGATCACTGAAGCGTGGTCGACTCCCATGAATCTAGACCATCAGATCATTCAACGTGTCGATCCGTTCACTGCAGTGTATGCTAAAAAATATGGAAAGTTATCGATGTGCTGGTTTGGGACAAGTCCGAGATTGATGGTGAAGGCCCCCGAGATGATGAAAGAAGTACTATCAAACAAGGAGGGTAGCTTTGAGAAGCCACCGATGAACCCACTTATTCTGAAGCTGACCAAGGGATTAACTACTCTTAAAGGGGAGGAATGGGCTAAACACAGGAGGATTATCAATCCTGCTTTTCATCTGGAAAGGCTCAAGGGAATGATGCCAGCCTTCACCATAAGCTGTAGCAACATGATAGAGCGCTGGAAGGAGATGGCTGGAAATCAAGAGAGTGTTGAAGTGGATGTGTGGCCTGAAATTCAGAGACTAACGGCAGATGTTATATCCAGGGCAGCCTTTGGCTCCAACTTTGAAGAAGGGAAGAAACTTTTTGAACTTCTCAAACAACTCACTCTTTTTACTGTTGAAGCCATGCAGACCTTGTATCTTCCTGGTTTCAGATTTATTCCAACAGCTAAAAACAGGAGGAGAGAGAAGCTGAACAAGGAGATCAAGACCATAATAGAGAGTATAATTCTAAGAAAAGAAAATTCCATGAGCAACCAGGAAGACAATGTTGATGACTTGTTATGCATGCTCTTGCAGTCGAGGAAGAAAGAAAATCAACAAGAAGGTGATGGACTGACAACTGATGAAGTGATGGAGGAGTGCAAGCAGTTCTACCTTGCAGGGCAGGAAACAACATCAAGCTTGATTACATGGACAGTCATTGTTTTGGCCATGCACTCAGAATGGCAAGAAAAAGCTAGGCAGGAAGTCTTGCAAATTTGTGGGAAGAATGAACCAACTTTTCAAAATTTAAACCACTTAAAGATTGTTACCATGATACTTAATGAAGTCCTGAGGTTATACCCACCAGTTATTGCTCAATATCAACATACTTATGCAGAAACAAAGATAGGTGAAGTCTTAATACCTGCCGGGGTTGATGTTACCTTAGCTACGCTGCTTATTCACCATGACCCCGAGTACTGGGGAGACGATGCAGAAGAGTTCAAACCTGAGAGATTCTCCGCAGGAGTTTCGAAGGCAAGCAAAGATCAGTTGGCCTTCTTTCCCTTTGGCTGGGGACCTAGGACCTGTGTTGGACAAAATTTTGCTATGTTAGAAGCTAAGATCGCATTGGCTATGATTCTACAGAATTTCTCTTTTGAGCTCTCACCTTCTTACGCACATGCTCCTCATACTGTCATGACTCTTCAACCACAGCATGGAGCCCAGCTGAAAGTTCACCAACTATAG 1575 43.17 MRSRPFFVCKSTKMEYFVFYSLALCLVVFGVAKAFYSIWWRPKLVERQLKRQGVRGSSYKPLVGDAKEYVSMITEAWSTPMNLDHQIIQRVDPFTAVYAKKYGKLSMCWFGTSPRLMVKAPEMMKEVLSNKEGSFEKPPMNPLILKLTKGLTTLKGEEWAKHRRIINPAFHLERLKGMMPAFTISCSNMIERWKEMAGNQESVEVDVWPEIQRLTADVISRAAFGSNFEEGKKLFELLKQLTLFTVEAMQTLYLPGFRFIPTAKNRRREKLNKEIKTIIESIILRKENSMSNQEDNVDDLLCMLLQSRKKENQQEGDGLTTDEVMEECKQFYLAGQETTSSLITWTVIVLAMHSEWQEKARQEVLQICGKNEPTFQNLNHLKIVTMILNEVLRLYPPVIAQYQHTYAETKIGEVLIPAGVDVTLATLLIHHDPEYWGDDAEEFKPERFSAGVSKASKDQLAFFPFGWGPRTCVGQNFAMLEAKIALAMILQNFSFELSPSYAHAPHTVMTLQPQHGAQLKVHQL 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3635735 3638744 + CmoCh10G007840.1 Cmo10g00784 390130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00784 524 PANTHER CYTOCHROME P450 72A15-LIKE 20 519 - -
Cmo10g00784 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Cmo10g00784 524 SUPERFAMILY Cytochrome P450 91 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 Gene3D Cytochrome P450 40 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 519 - -
Cmo10g00784 524 Pfam Cytochrome P450 95 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 PRINTS E-class P450 group I signature 123 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00784 524 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00917 Cmo-Chr7:4397355 Cmo10g00784 Cmo-Chr10:3635735 5.96E-41 dispersed
Cmo10g00614 Cmo-Chr10:2779472 Cmo10g00784 Cmo-Chr10:3635735 1.63E-139 dispersed
Cmo10g00784 Cmo-Chr10:3635735 Cmo10g01116 Cmo-Chr10:7666891 3.35E-177 dispersed
Cmo16g00795 Cmo-Chr16:4035464 Cmo10g00784 Cmo-Chr10:3635735 1.13E-46 dispersed
Cmo18g01116 Cmo-Chr18:11550519 Cmo10g00784 Cmo-Chr10:3635735 5.84E-134 dispersed
Cmo10g00784 Cmo-Chr10:3635735 Cmo01g01333 Cmo-Chr1:10578058 9.88E-167 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00784 - - csv:101206868 911.368