Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00800 ATGGGGTCCATGGCTAGATTACTCGTTGCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCCTTGTGTCTTTGTCAATGCCAAGAGAACCTACATTGTTCGCATGAAACATCATGCTCTGCCATCTGATTATCTCACCCACCATGACTGGTACTCTGCCCATCTCCAATCTCTGTCCTCCTCTGCTACCTCCGATTCCCTTCTCTACACCTACACCTCCGCCTACCATGGCTTCGCTGCTTCTCTTGACCCAGATGAAGCCGAATTGCTCCGCCAATCCGATTCAGTTCTGGGTGTCTATGAAGACACTGTTTACAATCTTCACACAACTCGCACTCCGGGTTTCCTCGGCCTCGACTCCGATTTCGGCTTGTGGGAAGGTCACAACACTCAGGATCTCGACCAGGCTTCTCATGATGTCATCATTGGGGTTCTCGATACTGGGATTTGGCCGGAGTCGAAGAGCTTTGATGACACCGGGATGCCGGAGATCCCATCACGGTGGCGTGGAGAATGTGAATCGGGACCCGATTTCAGCCCTTCTCTCTGTAACAAGAAACTAATCGGAGCTCGCAGCTTCTCGAAGGGTTATCAAATGGCTTCCGGTGGTGGATACTTTAGAAAATCCAGAGAGAACGAGTCGCCTCGTGACCAGGATGGGCACGGCACGCACACTGCGAGCACAGCTGCTGGGTCACATGTGGCTAACGCGAGCCTACTTGGGTATGCTAGAGGTATAGCTAGGGGAATGGCTCCTCAAGCAAGAGTTGCCGCTTACAAGACCTGTTGGCCCACTGGTTGCTTTGGATCTGACATTCTTGCCGGTATGGATCGGGCAATATCTGACGGCGTCGATGTGCTATCACTCTCTTTGGGCGGTGGCTCTGCACCGTATTACAGGGATACAATAGCAATCGGAGCATTTGCGGCCATGGAGAAGGGGGTTTTCGTTTCGTGCTCAGCTGGAAACAGTGGGCCAAACAAGGCGTCTCTGGCTAATGTGGCCCCGTGGATCATGACAGTCGGAGCCGGAACTCTGGACCGAGACTTCCCAGCTTATGTCCAACTCGGAAATGGCAAGCGGTTCACTGGAGTGTCACTCTACAGTGGCCAAGGAATGGGAAATAAACCGGTGGCTTTGGTGTACAACAAAGGAAGCAACAGCTCCAGCAACATGTGCTTACCCGGATCTCTTGAGCCGGCGTTTGTTCGGGGGAAAGTGGTAATCTGCGACAGGGGAATCAACGCCAGAGTAGAGAAGGGAGGGGTGGTGAGAGATGCAGGTGGCATTGGGATGATTCTGGCAAACACGGCAGCCAGTGGGGAAGAACTGGTGGCTGACAGTCACTTACTGCCGGCCGTGGCGGTTGGGGCGAAAACCGGCGACTTGATCCGGCAGTATGTACGGTCAGTAGCGAAGCCGACGGCCGTGCTGAGCTTTGGTGGGACAGTTCTGAACGTGCGCCCATCTCCAGTGGTGGCGGCCTTCAGTTCCAGAGGACCCAACTTGGTAACGCCCCAAATCCTTAAGCCGGACGTTATAGGGCCTGGCGTTAACATCCTGGCCGCCTGGTCTGAGTCCATCGGGCCTACTGGATTGGACAACGATAAGAGGAAAACTCAGTTCAATATCATGTCAGGAACATCCATGTCTTGCCCGCACATAAGTGGGCTGGCGGCGTTGCTGAAGGCAGCTCATCCATCATGGAGTCCAAGCGCAATCAAGTCTGCATTAATGACCACTGCCTACACGCAGGACAACACCAACTCATCTCTCCGGGATGCTGCCGGAGGGGCGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCTCACAAAGCCCTCTCCCCCGGTCTTGTATACGACATCTCGACCAATGATTATATTACCTTTTTGTGCTCCTTGGACTATGGGATCGATCATGTTCAGGCAATCGCGAAGCGATCGAACATAACCTGCTTGAAAAAGTTTGCTGACCCAGGGCAACTAAACTACCCTTCATTTTCAGTTGTGTTTGGGAGCAAGAGGGTTGTCCGGTACACTCGTATAGTTACCAATGTTGGGGCTGCAGGGTCAGTTTATGAAGTGGCTACTACTGCACCGTCGGTTGTGAAGGTGACGGTGAAACCTTCAAAGCTTGTGTTCTCTAAAGTTGGGGAGAGGAAGAGGTACACTGTTACATTCGTGGCGAGCAGGGACGCTGCTCGAACCACGAGATATGGGTTTGGATCGATTGCTTGGAGCAATGACCAACACCAAGTTAGAAGCCCGGTGGCATTCGCCTGGACCAAGTTGTGA 2301 52.85 MGSMARLLVASFLLLLLLLPCVFVNAKRTYIVRMKHHALPSDYLTHHDWYSAHLQSLSSSATSDSLLYTYTSAYHGFAASLDPDEAELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHNTQDLDQASHDVIIGVLDTGIWPESKSFDDTGMPEIPSRWRGECESGPDFSPSLCNKKLIGARSFSKGYQMASGGGYFRKSRENESPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKPVALVYNKGSNSSSNMCLPGSLEPAFVRGKVVICDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGAKTGDLIRQYVRSVAKPTAVLSFGGTVLNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDNDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPSWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWAHGAGHVDPHKALSPGLVYDISTNDYITFLCSLDYGIDHVQAIAKRSNITCLKKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYEVATTAPSVVKVTVKPSKLVFSKVGERKRYTVTFVASRDAARTTRYGFGSIAWSNDQHQVRSPVAFAWTKL 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3726208 3729259 + CmoCh10G008000.1 Cmo10g00800 390146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00800 766 ProSiteProfiles Serine proteases, subtilase domain profile. 120 616 - -
Cmo10g00800 766 Gene3D - 346 484 - -
Cmo10g00800 766 Pfam Peptidase inhibitor I9 29 107 IPR010259 -
Cmo10g00800 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Cmo10g00800 766 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Cmo10g00800 766 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cmo10g00800 766 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Cmo10g00800 766 Pfam PA domain 379 462 IPR003137 -
Cmo10g00800 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 763 IPR045051 -
Cmo10g00800 766 Gene3D - 633 763 - -
Cmo10g00800 766 MobiDBLite consensus disorder prediction 203 227 - -
Cmo10g00800 766 CDD PA_subtilisin_like 352 475 - -
Cmo10g00800 766 Pfam Subtilase family 137 587 IPR000209 GO:0006508|GO:0008236
Cmo10g00800 766 Pfam Fibronectin type-III domain 663 760 IPR041469 -
Cmo10g00800 766 SUPERFAMILY Subtilisin-like 106 620 IPR036852 GO:0004252|GO:0006508
Cmo10g00800 766 SUPERFAMILY Protease propeptides/inhibitors 29 105 - -
Cmo10g00800 766 Gene3D Peptidase S8/S53 domain 138 629 IPR036852 GO:0004252|GO:0006508
Cmo10g00800 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 107 IPR037045 -
Cmo10g00800 766 PANTHER CUCUMISIN-RELATED 19 763 - -
Cmo10g00800 766 CDD Peptidases_S8_3 104 582 IPR034197 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00800 Cmo11g00748 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01539 Cmo-Chr2:8934923 Cmo10g00800 Cmo-Chr10:3726208 0 dispersed
Cmo05g00151 Cmo-Chr5:663324 Cmo10g00800 Cmo-Chr10:3726208 0 dispersed
Cmo10g00800 Cmo-Chr10:3726208 Cmo16g00173 Cmo-Chr16:786400 0 dispersed
Cmo12g00913 Cmo-Chr12:8405049 Cmo10g00800 Cmo-Chr10:3726208 9.04E-112 dispersed
Cmo10g00800 Cmo-Chr10:3726208 Cmo11g00748 Cmo-Chr11:3648131 0 wgd
Cmo10g00800 Cmo-Chr10:3726208 Cmo17g00660 Cmo-Chr17:6842754 0 wgd
Cmo10g00800 Cmo-Chr10:3726208 Cmo08g00775 Cmo-Chr8:4887730 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00800 - - csv:101209781 1390.56