Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g00822 | ATGGGGAGAGAATTGCAGAAGCAGCCGCAGCAAGAGATGGCGTCCGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCCGACATCCTTCCCGATCTCGAAAACTACGTAAACGAGCAGGTCTCGTCAGAAACGTACAGCTTAGATGCTAATCTATGCCTTCTTCGCCTCTACCAGTTTGAGCCAGAGAGAATGAGTACCCAGATTGTGGCTCGCATCCTGGTCAAGGCTTTGATGGCAATGCCAGCTCCAGATTTCAGCCTTTGTCTCTTTTTAATTCCAGAACGTGTGAGATCCCTTAATGACACATTTTATACATATTATTATCAGCAAATGGAGGATCAATTCAAGACTTTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTTCGTCAATTCTGGGATGAAGCTTCCAAGAACCGTCACATAGTTGAAGCCGTGCCAGGTTTTGAGAAAGCAATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCATAAGGCTCCTAGATCTGTGCTTGCGGAGGCAATCAACATTGAGGGACTGTCATTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGAAAGGGCCAACTTATTGTTATACCACCCAACGAATTCAACCATCCTGAACTGAAGAAGAAATCGTCCGACAGCATTCCCTTGGAACACATCACTCGCATCTTCCCAATTCTTGGCTAA | 738 | 44.85 | MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVRSLNDTFYTYYYQQMEDQFKTLIILSHYLETGKFRQFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYHKAPRSVLAEAINIEGLSLDKFLEHQVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG | 245 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3851664 | 3854773 | + | CmoCh10G008220.1 | Cmo10g00822 | 390168 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g00822 | 245 | ProSiteProfiles | PCI domain profile. | 47 | 219 | IPR000717 | - | |
Cmo10g00822 | 245 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 | 8 | 245 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo10g00822 | 245 | Pfam | CSN8/PSMD8/EIF3K family | 67 | 207 | IPR033464 | - | |
Cmo10g00822 | 245 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K | 8 | 245 | - | - | |
Cmo10g00822 | 245 | SUPERFAMILY | Winged helix DNA-binding domain | 150 | 242 | IPR036390 | - | |
Cmo10g00822 | 245 | Hamap | Eukaryotic translation initiation factor 3 subunit K [EIF3K]. | 8 | 245 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo10g00822 | 245 | Gene3D | ARM repeat; domain 1 | 8 | 138 | IPR016020 | GO:0003743|GO:0005852|GO:0006446|GO:0043022 | |
Cmo10g00822 | 245 | SUPERFAMILY | ARM repeat | 10 | 148 | IPR016024 | - | |
Cmo10g00822 | 245 | Gene3D | - | 141 | 243 | IPR036388 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00822 | Cmo11g00770 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00822 | Cmo-Chr10:3851664 | Cmo11g00770 | Cmo-Chr11:3762072 | 2.18E-165 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g00822 | K15028 | - | csv:101214255 | 436.802 |