Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g00860 | ATGAGGCTCCAAGTGAACGACGGCGATGTCGACGACGATCTTGTTCCTCCCCCCAACTTCTCCAGTGTTGAGGATGGCATTTTCCGATCCGGCTTCCCTCAGCCTTCCAATTTTCCATTCCTCAAGAATCTAAATCTCCGCTCCATCATATATTTGTGTCCTGAACCCTACCCAGAGGAGAATTTGGAGTTTCTTAGAGCTAATAACATCAAGCTTTTTCAATTCAAAATTGAAGGGACAAAGGAGCCTTTCGTTTCGATTCCGAAGGATGCTATTCTGGACGCCCTAAAAATCCTAATTGATGTTAGGAATCACCCCATTTTGATCCACTGCAAGCGTGGAAAGCATCGAACAGGGTCGCTCGTGGGTTGCCTGAGGAAGTTCCAGAACTGGTGCTTGACATCAGTGTTCGAGGAGTACCAGCGATATGCAGGCGTGAAATCAAGGGCAACGGATCTACAATTCATCGAGGCATTCGACATAGAGCCTCTGAGGCAATGTGTTTACAGCATCATATACCAGTACCAAGGGTATAGCTCAAACAAGAGAAGACTATTGTACAGAGAAGAGAAGTTGCAGAAGCCCCAAACAACACCAGTTTAG | 603 | 46.27 | MRLQVNDGDVDDDLVPPPNFSSVEDGIFRSGFPQPSNFPFLKNLNLRSIIYLCPEPYPEENLEFLRANNIKLFQFKIEGTKEPFVSIPKDAILDALKILIDVRNHPILIHCKRGKHRTGSLVGCLRKFQNWCLTSVFEEYQRYAGVKSRATDLQFIEAFDIEPLRQCVYSIIYQYQGYSSNKRRLLYREEKLQKPQTTPV | 200 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4080061 | 4082388 | + | CmoCh10G008600.1 | Cmo10g00860 | 390206 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g00860 | 200 | PRINTS | Plant and fungal dual specificity phosphatase signature | 14 | 31 | IPR020428 | GO:0016791 | |
Cmo10g00860 | 200 | PRINTS | Plant and fungal dual specificity phosphatase signature | 51 | 64 | IPR020428 | GO:0016791 | |
Cmo10g00860 | 200 | PRINTS | Plant and fungal dual specificity phosphatase signature | 70 | 84 | IPR020428 | GO:0016791 | |
Cmo10g00860 | 200 | PRINTS | Plant and fungal dual specificity phosphatase signature | 87 | 101 | IPR020428 | GO:0016791 | |
Cmo10g00860 | 200 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 19 | 170 | IPR020422 | GO:0006470|GO:0008138 | |
Cmo10g00860 | 200 | Gene3D | Protein tyrosine phosphatase superfamily | 13 | 162 | IPR029021 | - | |
Cmo10g00860 | 200 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 109 | 119 | IPR016130 | GO:0016311|GO:0016791 | |
Cmo10g00860 | 200 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 10 | 183 | - | - | |
Cmo10g00860 | 200 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE DSP5 | 10 | 183 | - | - | |
Cmo10g00860 | 200 | CDD | PFA-DSP_Siw14 | 14 | 160 | - | - | |
Cmo10g00860 | 200 | Pfam | Tyrosine phosphatase family | 14 | 164 | IPR004861 | - | |
Cmo10g00860 | 200 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 14 | 160 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00860 | Cmo-Chr10:4080061 | Cmo20g00254 | Cmo-Chr20:1227643 | 1.88E-74 | dispersed | |
Cmo10g00860 | Cmo-Chr10:4080061 | Cmo11g00963 | Cmo-Chr11:5063323 | 9.55E-132 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g00860 | K18045 | - | csv:101211082 | 348.591 |