Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00893 ATGATGAAGACACAAGGATATGTTAAAGGAAGAACAACAACCAAGGTTACTGCACAACAGTTAGTTTTTGAGTTGAAACAGAAGGTGGTTCTTGCACTAAACAAGCTTGCAGATCGAGACACTTACCAAATTGGGTTTGATGAGCTTGAAAAAACAGCTGAATGCATAGCTCCTGACATGATTCCCCCTTTCTTGTCCTGTATTTTGGACACGGATTCGGAGCAGAAGAGCTCGGTTCGACAGGAATGCGTTCGGCTAATGAGTACACTAGCCAAATTCCATGAAGGTCTTATTAGGCCTCACCTTCGTAGAATGGTTAGCAGCATTATGAAACGGCTAAAGGATCCAGATTCTGGTGTGAGGGATGCGTGTGTGGAGACATGTGGAGTTTTAGCTTCAAAATTGATTAATGTTGGGGATGAGAGTGATGAGGTTTTTGTTACTTTGGTTAAACCAATCTTTGAAGCTTTGGGGGAACAACATAAGCAAATGCAATCAGGTTCAGCGTTTTGCTTGGCAAGGATTATTGACAACACTCGGGATCCGCCCGTTTCGATTTTGCAGCGGATGTTGGCAAGAACCACAAAGCTACTTAAGAATCCTCACTTCATGGCAAAGCCAGGTGTGATTGATTTGAACAGAAGTATTATCCAGGCTGGGGGTGCTTCAAATCAAAATGTTCTCTCTGCTGCAATGCTTGGCATCCAAGAAGCTCTCAAGAACAGTGATTGGACGACTCGAAAAGCTGCTTCCATTGCATTAGGTGAAATTGCAGCAAGCTGTGCGTCCTTCGTCGGGTCTTTTAAGGCATCCTGCATTCGCTCCCTCGAATCATGTCGATTTGACAAGGTGAAGCCAGTTAGGGACATTGTACTCCAGACCCTTCAATATTGGAACAACATTCAAGGGCCAGATACTCCTGAACCCTCAGAAGCTGGTTCATCCATTAAAGAAAACCTTTGTGGGGGTGACTTCAGTGATGTTACTAGTTCAATGGAACATGGAAAGAAGGATGCTGCCATTAGGAAGGTAGGCGTGGGCTCTACAAGAGGGAGGATTCCACTAAACATGAGAAAAACCTGTCCAAGTTATTTGGAGAACACACAACATTTCAAAGCAAATGATTGTCATATTGAAATAGCTGTTCCACAAAAGCGCAACCAGTCATTATCAGGATTTCACACAGAGGAATCTGAAGGGAGTACTGTCACAAAGACATTTCAAGGAGTGAGCACTGATGTTACAGACATTCAAGATGTTGAATATGATTATGTCAGAATGGATGACAGACAAGAATGTTCTTCTGTGTCCAGTTTTTTACCTGGTCGGGAATTCGGAACGGTTTGTCGTGAGAGTCTTGAAGACAGCAGTGTGCATAAGTCAACTGATAGAAGTAAGCGATTTGTCAATGAAGGGGTTTGTAGTGAGGAGCAAATGTACTCGACACCGGTGACGGATCGTAGAAGTCTTGAGTCCGTGGTCACGGAGTCTAGCTGTCGAATTGTACAAGAATGTGACTCGGAAGTTGCAAATGATATGGTCTGCATTCGAAAGCATCTCCTGGAAATTGAAAACAAGCAGTCCAACTTGATGGATTTATTCAAGGAGTTCACTTCGGGCATAATGGACAGCTTATCAGTGATACAATCAAGGGTCGTGGGACTAGAACACGTCGTTTACGGATTATCTCAGGATCTTTTGAATGGTAATAGGCCTGCTGATCATTCAAACTCAAAGTTCATGAAGCAGAACCAAAGCTTGAATTCTCCTAGGCTTTCGACGTGCACTCCGAGGTCATCGGTTGATATTCCAAGCAGACAGTCTTCGTTATTGTCGCTTAAACATTCTAGCATATGGGATGAAAACGTTGCTGTTAGGAGCCGGTCGAGTAATGCAACTAAACATGGAACTGATATTTGGAGAAGGGCTAATCCAGTCAAGAAGCCTCCTGAGAAGGATCTTCAGGGAATACAGAACAGTAGCAGCCGTCACTTGGGAAAGACCAATACAGTGTTTTCTTCATTCCCCAGTGCTAATGTTAGACAAGTTTCAGATGGAAAGAACAGCATTTCGAGACGTGTGTCGGGTTTCCTACGTCAAGGTGATGTTGATGCAGCATACATGGAAGCCTTGCGTTCGGGTGATGAAGTAGTTGATTTGAGCACAATCCATGGGGCGAATTCTCTCGGACTCTCAGCCAAAGAAAGACAAGAATTTGCACTTGCCATCCAGGAGGCTTCAAAAAGTGAACGTTCTAATCCTGCAGAAACAAGACTTGTCACTCAGCTAGCAACAAAACTGTGCTATTTATGGGGCGGCAAGTCTCAATGGCAAGGCCTTGTTTCCAAAGATTTCTACCCTGGATTTCAGGTAAGTGTTTGTTCAATGGAGATAGGAAGCTTGGACTTCAAGAAACAGTACATTTGTAGTTTAGAGCGTTTCTTCCTTCTGTTGACTTATGTCTGTCTGCTTTTGTTCGCATTACGAGATGCTAAGTTCAAAACCAGTGGAAGCTCAGAAAAGCTCCACAACGTAACAATGGCGGATTTCCTCATCTCTCTCTTAATCCTCTTCCTCTCCTTGATCTCTCTCACTCTCTTCGTCCTCTTTTACAAGCACAAATCCTTATTCTCCTATCCCAACACTCCTCCCGGCGCCATTGGCCTTCCGATCATTGGCGAGAGCCTCGAGTTCTTATCCACCGGCTGGAAAGGCGAGCCTGAGAAGTTCATCTTTGATCGTTTGAATAAGTACAAGTCTGATATCTTCAAAACCTCCATCGTCGGCGTTCCGGCCGCCATTTTCTGCGGCCCTGCTTGCAACAAGTTCCTCTTCTCCAATGAGAATAAACTCGTTACTTCCTGGTGGCCGGATTCCGTCAACAAGATCTTCCCCGCTTCTACTGAGATCAACTCAAAAGAGTCAGCTATACGACTTAAGAAGCTCCTCCCGCGGTTCCTTAAACCGGAAGCGCTCCAGCGTTATATTGGAGTCATGGACGAACTTGCTCAACGCCATTTTGCATCCTCTTGGGAGAACAGAGAACAAGTCCTCGTGTTTCCTCTAGCGAAAAGTTTCACATTCTCGCTCGCGTGCCGATTGTTCGTGAGCCTAGAGGATCGTATCCACGTCGAAAGATTGTCGGAACCATTCCAGAGCATTGCGGCAGGAATCATATCGATGCCGATCGATTTGCCAGGAACGCCGTTCAACCGAGCGATAAAGGCGTCAAACTTCGTCAGAAAGGAACTACTCTCGATCGTGAGGCAGAGGAAATCGGATCTGGCTGAAGGAAAGGCGTCGCCGACGCAGGACATTCTGTCTCACATGCTTCTCACCTGCGATGAAATCGGACAGTACATGAACGAATCTGCTATCGCCGATAATATTCTCGGCTTGTTAATCGGCGGCCATGACACTACCAGTGCTGCATGCACCTTCATCGTTAATTACCTCGCTGAGCTTCCTCAAATCTACGATGGCGTCTACAGAGAGCAAATGGAAATAGCAAAAGCAAAAGCCGCAGGGGAGTTATTGAAGTGGGAAGACATTCAGAAGATGAAGTATTCGTGGAATGTCGCCTGTGAGGTTCTAAGACTTGCTTCCCCACTTCAAGGTGCCTTTAGGGAAGCCATCAATCACTTCGTCTTCAATGGCTTCTACATTCCCAAGGGCTGGAAGGTAATTTCCCCTCTTTCCTCCTCTACCTTGATGGTTTGTTAG 3723 45.34 MMKTQGYVKGRTTTKVTAQQLVFELKQKVVLALNKLADRDTYQIGFDELEKTAECIAPDMIPPFLSCILDTDSEQKSSVRQECVRLMSTLAKFHEGLIRPHLRRMVSSIMKRLKDPDSGVRDACVETCGVLASKLINVGDESDEVFVTLVKPIFEALGEQHKQMQSGSAFCLARIIDNTRDPPVSILQRMLARTTKLLKNPHFMAKPGVIDLNRSIIQAGGASNQNVLSAAMLGIQEALKNSDWTTRKAASIALGEIAASCASFVGSFKASCIRSLESCRFDKVKPVRDIVLQTLQYWNNIQGPDTPEPSEAGSSIKENLCGGDFSDVTSSMEHGKKDAAIRKVGVGSTRGRIPLNMRKTCPSYLENTQHFKANDCHIEIAVPQKRNQSLSGFHTEESEGSTVTKTFQGVSTDVTDIQDVEYDYVRMDDRQECSSVSSFLPGREFGTVCRESLEDSSVHKSTDRSKRFVNEGVCSEEQMYSTPVTDRRSLESVVTESSCRIVQECDSEVANDMVCIRKHLLEIENKQSNLMDLFKEFTSGIMDSLSVIQSRVVGLEHVVYGLSQDLLNGNRPADHSNSKFMKQNQSLNSPRLSTCTPRSSVDIPSRQSSLLSLKHSSIWDENVAVRSRSSNATKHGTDIWRRANPVKKPPEKDLQGIQNSSSRHLGKTNTVFSSFPSANVRQVSDGKNSISRRVSGFLRQGDVDAAYMEALRSGDEVVDLSTIHGANSLGLSAKERQEFALAIQEASKSERSNPAETRLVTQLATKLCYLWGGKSQWQGLVSKDFYPGFQVSVCSMEIGSLDFKKQYICSLERFFLLLTYVCLLLFALRDAKFKTSGSSEKLHNVTMADFLISLLILFLSLISLTLFVLFYKHKSLFSYPNTPPGAIGLPIIGESLEFLSTGWKGEPEKFIFDRLNKYKSDIFKTSIVGVPAAIFCGPACNKFLFSNENKLVTSWWPDSVNKIFPASTEINSKESAIRLKKLLPRFLKPEALQRYIGVMDELAQRHFASSWENREQVLVFPLAKSFTFSLACRLFVSLEDRIHVERLSEPFQSIAAGIISMPIDLPGTPFNRAIKASNFVRKELLSIVRQRKSDLAEGKASPTQDILSHMLLTCDEIGQYMNESAIADNILGLLIGGHDTTSAACTFIVNYLAELPQIYDGVYREQMEIAKAKAAGELLKWEDIQKMKYSWNVACEVLRLASPLQGAFREAINHFVFNGFYIPKGWKVISPLSSSTLMVC 1240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4356178 4369449 - CmoCh10G008930.1 Cmo10g00893 390239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00893 1240 Gene3D Cytochrome P450 873 1237 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00893 1240 MobiDBLite consensus disorder prediction 643 665 - -
Cmo10g00893 1240 SUPERFAMILY ARM repeat 24 298 IPR016024 -
Cmo10g00893 1240 PANTHER TORTIFOLIA1-LIKE PROTEIN 2 5 717 - -
Cmo10g00893 1240 Pfam HEAT repeat 107 134 IPR000357 GO:0005515
Cmo10g00893 1240 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 716 774 IPR033337 GO:0005874|GO:0008017
Cmo10g00893 1240 SUPERFAMILY Cytochrome P450 876 1234 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00893 1240 Pfam Cytochrome P450 883 1234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00893 1240 PANTHER TORTIFOLIA1-LIKE PROTEIN 2 716 774 - -
Cmo10g00893 1240 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 717 IPR033337 GO:0005874|GO:0008017
Cmo10g00893 1240 MobiDBLite consensus disorder prediction 581 601 - -
Cmo10g00893 1240 Gene3D - 14 339 IPR011989 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00940 Cmo-Chr9:4931819 Cmo10g00893 Cmo-Chr10:4356178 8.07E-74 dispersed
Cmo10g00169 Cmo-Chr10:758189 Cmo10g00893 Cmo-Chr10:4356178 1.55E-59 dispersed
Cmo10g00893 Cmo-Chr10:4356178 Cmo12g00642 Cmo-Chr12:4100743 1.17E-63 dispersed
Cmo10g00893 Cmo-Chr10:4356178 Cmo11g00933 Cmo-Chr11:4851870 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00893 - - csv:101205801 1334.7