Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g00908 | ATGGCCACTCAGGCACTTGTTTCATCTTCCTTAACCTCCTCGGTGGGCGCCGCCAGACAAAGATTTGGTCCCAAACCCTGTCTTGGATCCTCCACAAAACAAGCTTCTTTTGTTGTTAGAGCTGAAGCCACTCCTCCCGTTAAGCAAGGAGCCAACCGAGCATTATGGTTTGCTTCAAAACAAAGCCTTTCTTACTTGGATGGAAGTCTCCCAGGCGATTACGGGTTCGACCCACTAGGGCTATCGGACCCTGAAGGCACGGGAGGGTTCATCGAGCCAAGATGGTTAGCATACGGGGAGGTAATCAACGGGCGGTTCGCAATGTTGGGAGTAGTAGGAGCCATAGCCCCAGAGATATTAGGGTCACTAGGGCTAATCCCACCGGAAACAGCCCTCCCATGGTTCAAAACTGGGGTGATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCCTACACACTATTTGTACTTGAAATGGCTCTAATGGGGTTCGCTGAACATAGAAGATTTCAAGATTGGGCTAAGCCAGGGTCCATGGGGAAGCAGTACTTCTTGGGTCTAGAGAGGTTCTTGGGTGGGTCAGGGGACCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCTCTAGGGTTTGGTAAAGATGAGAAGTCAATGAAGGATTTGAAGCTAAAAGAAGTGAAGAATGGAAGGCTTGCAATGTTGGCCATATTGGGTTTGTTTATACAAGGACTTGTCACTGGCGTTGGCCCTTACCAAAACCTTTTGGACCATTTGTCTGACCCTATTAACAATAACCTCTTGACAAGCCTTAAATTTCACTAG | 822 | 49.39 | MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH | 273 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4497381 | 4498937 | + | CmoCh10G009080.1 | Cmo10g00908 | 390254 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g00908 | 273 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 272 | IPR001344 | GO:0009765|GO:0016020 | |
Cmo10g00908 | 273 | Gene3D | Chlorophyll a/b binding protein domain | 53 | 272 | - | - | |
Cmo10g00908 | 273 | Pfam | Chlorophyll A-B binding protein | 64 | 242 | IPR022796 | - | |
Cmo10g00908 | 273 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC | 1 | 272 | - | - | |
Cmo10g00908 | 273 | SUPERFAMILY | Chlorophyll a-b binding protein | 52 | 269 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00908 | Cmo-Chr10:4497381 | Cmo12g00495 | Cmo-Chr12:3032893 | 2.53E-48 | dispersed | |
Cmo10g00908 | Cmo-Chr10:4497381 | Cmo11g00916 | Cmo-Chr11:4728050 | 9.05E-166 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g00908 | K08909 | - | csv:101202993 | 516.153 |