Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00908 ATGGCCACTCAGGCACTTGTTTCATCTTCCTTAACCTCCTCGGTGGGCGCCGCCAGACAAAGATTTGGTCCCAAACCCTGTCTTGGATCCTCCACAAAACAAGCTTCTTTTGTTGTTAGAGCTGAAGCCACTCCTCCCGTTAAGCAAGGAGCCAACCGAGCATTATGGTTTGCTTCAAAACAAAGCCTTTCTTACTTGGATGGAAGTCTCCCAGGCGATTACGGGTTCGACCCACTAGGGCTATCGGACCCTGAAGGCACGGGAGGGTTCATCGAGCCAAGATGGTTAGCATACGGGGAGGTAATCAACGGGCGGTTCGCAATGTTGGGAGTAGTAGGAGCCATAGCCCCAGAGATATTAGGGTCACTAGGGCTAATCCCACCGGAAACAGCCCTCCCATGGTTCAAAACTGGGGTGATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCCTACACACTATTTGTACTTGAAATGGCTCTAATGGGGTTCGCTGAACATAGAAGATTTCAAGATTGGGCTAAGCCAGGGTCCATGGGGAAGCAGTACTTCTTGGGTCTAGAGAGGTTCTTGGGTGGGTCAGGGGACCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCTCTAGGGTTTGGTAAAGATGAGAAGTCAATGAAGGATTTGAAGCTAAAAGAAGTGAAGAATGGAAGGCTTGCAATGTTGGCCATATTGGGTTTGTTTATACAAGGACTTGTCACTGGCGTTGGCCCTTACCAAAACCTTTTGGACCATTTGTCTGACCCTATTAACAATAACCTCTTGACAAGCCTTAAATTTCACTAG 822 49.39 MATQALVSSSLTSSVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQGANRALWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLDHLSDPINNNLLTSLKFH 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4497381 4498937 + CmoCh10G009080.1 Cmo10g00908 390254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00908 273 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 272 IPR001344 GO:0009765|GO:0016020
Cmo10g00908 273 Gene3D Chlorophyll a/b binding protein domain 53 272 - -
Cmo10g00908 273 Pfam Chlorophyll A-B binding protein 64 242 IPR022796 -
Cmo10g00908 273 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 272 - -
Cmo10g00908 273 SUPERFAMILY Chlorophyll a-b binding protein 52 269 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00908 Cmo-Chr10:4497381 Cmo12g00495 Cmo-Chr12:3032893 2.53E-48 dispersed
Cmo10g00908 Cmo-Chr10:4497381 Cmo11g00916 Cmo-Chr11:4728050 9.05E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00908 K08909 - csv:101202993 516.153