Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00938 ATGGATGCCTTCTTAGTGCTTCTATGTATGCCTTTCATTTTTGTTATGTTCTCTCATTGTTATTACCGCAAAACAAAGCATTCAAATGGGCAAGCAGCTGAGCTCCCACCAGGCCCTAAGCCATGGCCTCTCGTGGGCTGCCGCCCAACAATGTTGGCCACCAACTTGCCAACCTACAAATGGATCCATGCAGTAATGAAGCAATTCAACACTGAAATTGCTTGCATACGTCTTGGAAGTACTTACATAATTCCTGTGGCTTCTCCACGGCTCGCTCTTGAGTTTCTTAAAACATATGATTCTATCTTTGCATCACGTTCCTCCATTTCGAACACGGTCGATATTCTAAACCGTAGATGTGTCACCACCATATTTGCACCCTTGGGACAACAATGGAGGAAGATGAGAAGAATTCTTGCATTAGAAGTACTCAATCCATCAACTCTCCATCGAATGCTTGGCCATAGAAACGCCGAGGCTGATACTCTTTTACGCTATATTTTCAGCCAAACAAGTACTAGAGGTGGAGGTGTGGTTAATGTTAGAAGCGTAACACAACATTATTGTGGTAACATAATGAGAAGAATGTTATTCAATCAAAGATACTATGGCAAATGGAGAGAAGATGGAGGGCCAACTTTCGAAGAAGAAGAGCATGATCAAGCATCGTTGACAATTATTAGGCATCTTCACGCATTTTCTATATCAGATTTCATGTCTTGGTTGAAGCCATTTGATTTAGATGGACACGAGAAAGTTATGAAGAGTGCGTTGAATGTCGTTCAAAAGTTTGATGAACCCATTATAGACGAGAGAGTTCAAAGATGGAAAGATGAAAAATTGGAAGAGGTGAAGGACGACATTCTTGATATCCTCATTTCACTCAAAGATGAAAATGCAAAACCATTGCTATCTGTCGTAGAGATTAAAGCTCAAATCATGGAGTTACAAATTGCAACGATAGATAATCCTTCAAACGCAGTAGAATGGGCAATGGCGGAGTTACTAAACCAACCAAAAATTCTTGAAAAAGCCATTGAAGAATTGGACAAAGTAGTTGGAAGAGAAAGGCTAGTTCAGGAATATGATATCCCAAATCTCAAGTACCTCACCGCTTGTATTAGAGAATCATTTCGACTTCATCCATTTTCACCTTTCAACGTTCCTCATGTCTCAAACACGGACATCATAGTGGCGGGTTACTTCATTCCAAAAGGTAGTGAAGTGTTGCTCAGCCGTACAGGTCTAGGCCGAAACCCAAGGATTTGGGAGGATCCAATGAGGTTTAATCGAGAGCGTCACCTAAATGATAGGACAGTGGAATTGGGATTATTAGAACCCAACCTGCGATTCATGAGCTTCAGTAGAGGGAGAAGAGGGTGCCCTGGTAGCTCACTTGGCACTAACATTACTATGATGCTATTTGCAAGACTTCTACAAGGCTTTTCATGGAGCTTTGTGCCTGGAATCACAAAGATAGCTTCAATCTCTGAAGCTGATGAACTCTCTCTCCCGAAGCCATTGCATCTGCATGCACAACCACGTCTATCTCATATCATGTACCCAAGGCTTGTTCATCATGATGCATAG 1590 41.76 MDAFLVLLCMPFIFVMFSHCYYRKTKHSNGQAAELPPGPKPWPLVGCRPTMLATNLPTYKWIHAVMKQFNTEIACIRLGSTYIIPVASPRLALEFLKTYDSIFASRSSISNTVDILNRRCVTTIFAPLGQQWRKMRRILALEVLNPSTLHRMLGHRNAEADTLLRYIFSQTSTRGGGVVNVRSVTQHYCGNIMRRMLFNQRYYGKWREDGGPTFEEEEHDQASLTIIRHLHAFSISDFMSWLKPFDLDGHEKVMKSALNVVQKFDEPIIDERVQRWKDEKLEEVKDDILDILISLKDENAKPLLSVVEIKAQIMELQIATIDNPSNAVEWAMAELLNQPKILEKAIEELDKVVGRERLVQEYDIPNLKYLTACIRESFRLHPFSPFNVPHVSNTDIIVAGYFIPKGSEVLLSRTGLGRNPRIWEDPMRFNRERHLNDRTVELGLLEPNLRFMSFSRGRRGCPGSSLGTNITMMLFARLLQGFSWSFVPGITKIASISEADELSLPKPLHLHAQPRLSHIMYPRLVHHDA 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4694525 4696490 + CmoCh10G009380.1 Cmo10g00938 390284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00938 529 PANTHER PHENYLALANINE N-MONOOXYGENASE 12 520 - -
Cmo10g00938 529 Pfam Cytochrome P450 36 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00938 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Cmo10g00938 529 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00938 529 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00938 529 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00938 529 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00938 529 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00938 529 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00938 529 Gene3D Cytochrome P450 29 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00938 529 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 520 - -
Cmo10g00938 529 SUPERFAMILY Cytochrome P450 36 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00938 Cmo-Chr10:4694525 Cmo10g00945 Cmo-Chr10:4722630 0 dispersed
Cmo10g00941 Cmo-Chr10:4702482 Cmo10g00938 Cmo-Chr10:4694525 1.51E-06 dispersed
Cmo10g00938 Cmo-Chr10:4694525 Cmo10g00939 Cmo-Chr10:4694587 1.34E-17 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00938 - K12153 cpep:111780516 953.74