Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00940 ATGGATGCCTTCTTTGTGCTTCTATGTATGTCTTTCATTTTTGTTATGTTCTCTCAATGTTATTACCGCAAAACAAAGCATTCAAATGGGCAAGCAGCTGAGCTCCCACCAGGCCCTAAGCCATGGCCTCTCGTGGGCTGCCTCCCAACAATGTTGACCACCAACATGCCAACCTACAAATGGATCCATGCAGTAATGAAGCAATTCAACACTGAAATTGCATGCATACGTCTTGGAAGTACTTACATAATCCCTGTGTCTTCTCCAGAGATCGCTCTTGAGTTTCTCAAAACAAATGATTCTATCTTTGCATCACGTTCTTGTATTTCCAACACCGTTGGTATGTTAAGTCATGGATATCTCACCACCGCCCTTTCACCGATGGGAGAACAATGGAGGAAGATGAGAAGAATTCTTACATCAGAGATATTCAATCCATCAACTCTCCATCGAATGCTTGGCCATAGAAACACCGAGGCTGATACTCTTTTACGCTTTGTATTTAGCCAAACAAGTAATAGAGATGGAGGAGTGGTTAATATTAGAAGCATAACACAACATTATTGTGGTAACATAATGAGAAGAATGATATTCAATAAAAGATACTATGGCAAAGGAAGAGAAGATGGAGGGCCAACTTTTGAAGAGGAAGAGCATAATCAAGCATTATTCACAATGATCGAGTATATTTATGCATTTTCTATATCGGATTTCGTACCTTGGTTGAAGCCATTTGATTTAGATGGACATCAAAAAATTATGAAGAAAGCTTTGAATGTCGTTCAAAAGTATGATGAACCTATTATAGACGAGAGAGTTCAAAGATGGAAAGATGGGAAAATGGAAGGGGTGAAGGACGACATTCTTGATATCCTCATTTCACTCCAACATAAAAATGCAAAATCATTGCTATCTGTCGCAGAGATTAAAGCTCAAATCACGGAGTTACAAATTGCGGCAATAGATAATCCATCAAATATTGTTGAATGGGCAATGGCAGAGTTAATGAATCAACCAAAAATTCTCGAAAAAGCCATGGAAGAATTGGACAAAGTAATTGGAAGAGAAAGGGTTGTTGAAGAATCTGATATCCCAAATCTCAAGTACCTCACCGCTTGCATTAGAGAAACATTTCGACTTCATCAATTTTCGCCTTTCAACCTTCCTCATGTCTCAAACTCTGACATCATTATAGCTGGTTACTTCATCCCAAAAGGTAGTGAAGTGTTTCTCAGCCGTATAGGTCTAGGCCGAAATCCAAAGACTTGGGAGGATCCAATGAAGTTTAGTCCAGAGCGGCACATGAATGATAGGACAACGGAATTGGGATTATTAGAACCCAACCTGCGATTCATTACCTTCAGTAGAGGGAGAAGAGGGTGCCTTGGTAGCTCACTCGGCACTACCATTACTATGATGCTATTTGCAAGACTTCTACAAGGCTTTTCATGGAGCTTACTGCCAGGAATCACAAAGATAGACTTCTCCCAAGCTGATGAACTCTCTCTCCCAAAGCCATTGCATTTGCTTGCAAAGCCACGCTTATCTCATGTTATGTACCCTCCATCTTCTCTCCCTTTGCCATAG 1587 40.39 MDAFFVLLCMSFIFVMFSQCYYRKTKHSNGQAAELPPGPKPWPLVGCLPTMLTTNMPTYKWIHAVMKQFNTEIACIRLGSTYIIPVSSPEIALEFLKTNDSIFASRSCISNTVGMLSHGYLTTALSPMGEQWRKMRRILTSEIFNPSTLHRMLGHRNTEADTLLRFVFSQTSNRDGGVVNIRSITQHYCGNIMRRMIFNKRYYGKGREDGGPTFEEEEHNQALFTMIEYIYAFSISDFVPWLKPFDLDGHQKIMKKALNVVQKYDEPIIDERVQRWKDGKMEGVKDDILDILISLQHKNAKSLLSVAEIKAQITELQIAAIDNPSNIVEWAMAELMNQPKILEKAMEELDKVIGRERVVEESDIPNLKYLTACIRETFRLHQFSPFNLPHVSNSDIIIAGYFIPKGSEVFLSRIGLGRNPKTWEDPMKFSPERHMNDRTTELGLLEPNLRFITFSRGRRGCLGSSLGTTITMMLFARLLQGFSWSLLPGITKIDFSQADELSLPKPLHLLAKPRLSHVMYPPSSLPLP 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4701188 4702869 + CmoCh10G009400.1 Cmo10g00940 390286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00940 528 SUPERFAMILY Cytochrome P450 36 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00940 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Cmo10g00940 528 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 519 - -
Cmo10g00940 528 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00940 528 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00940 528 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00940 528 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00940 528 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00940 528 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00940 528 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00940 528 Gene3D Cytochrome P450 29 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00940 528 Pfam Cytochrome P450 36 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00940 528 PANTHER PHENYLALANINE N-MONOOXYGENASE 10 519 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00940 Cmo-Chr10:4701188 Cmo10g00946 Cmo-Chr10:4731225 0 dispersed
Cmo10g00939 Cmo-Chr10:4694587 Cmo10g00940 Cmo-Chr10:4701188 2.10E-16 tandem
Cmo10g00940 Cmo-Chr10:4701188 Cmo10g00941 Cmo-Chr10:4702482 2.50E-06 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00940 - K12153 cpep:111780516 907.131