Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g00945 ATGGATGCCTTCTTTGTGCTTCTATTCATGCCTTTCATTTTTGTGATGTTCTCTCAATGTTATTACCGCAAAAGAAAGCATTCTAATGGGGAAGCACCTGAGCTCCCACCAGGCCCTAAACCATGGCCTCTCGTGGGCTGCCTCCCAACAATGTTGACCACCAACTTGCCAACCTACCAATGGATCCATGCAGTAATGAAGCAATTCAACGCTGAAATTGCATGCATACGTCTTGGAAGTATTTACATAATTCCTGTGGCTTCTCCACAACTTGCTCTTGAATTTCTTAAGACATATGATTCTATCTTTGCATCACGTTCTTCCATTTCCAACACGGTCGATACCTTAAGCCATCGATATCTTACTGCCGCCTTTTCACCTTTGGGAAAACAATGGAGGAAGATGAGAAGAATTCTTGCTTCAGAAATACTCAATTCATCAACTCTACATCGAATGCTTGGCCATAGAAATGCCGAAGCTGATACTCTTCTACGCTATATTTTCAGCCAAACAAGTAATAGAGATGGAGCAGTCGTTAATCTTAGAAGCATAACACAACATTATTGTGGTAACATAATCAGAAGAATGCTATTCAATAAAAGATACTATGGCAAAGGAAGAGAAGATGGAGGGCCAACTTTTGAAGAAGAAGAGCATAATCAAGCATTGTTGACAATTCTTAAGCATGTTAATGCATTTTCTACATCGGATTTCATGCCTTGGTTGAAGCCATTTGATTTAGATGGACATCAAAAAATTATGAAGAATGCGTTAAATGTCGTTCAAAAGTATGATGAACCCATTATAGACGAGAGAGTTCAAAGATGGAAAGATGGGAAAATGGAAGGGGTGAAGGAGGACATTCTCAATATCCTTATTTCGCTCAAAGATGAAAATGCAAAACCATTGCTATCTGTCGCAGAGATTAAAGCTCAAATCACGGTAAGCAATGAGCTACAAATTGCAACGATAGATAATCCTTCGAACGCAGTGGAATGGGCAATGGCGGAGTTACTAAACCAACCGAAAATTCTCGAAAAAGCCATTGAAGAATTGGACAAAGTAGTTGGAAGAGAAAGGCTAGTCCAGGAATATGATATCCCAAATCTCAAGTACCTCACTGCTTGTATTAGAGAATCATTTCGACTTCATCCATTTTCACCTTTCAACGTTCCTCATGTCTCAAACACGGACATCATAGTGGCGGGTTACTTCATCCCAAAAGGTAGTGAAGTGTTGCTCAGCCGTATAAGTCTAGGTCGAAACCCAAGGATTTGGGAGGATCCAATGAGGTTTAATCCAGAGCGTCACCTAAATGATAGGACAGTGGAATTGGGATTATTAGAGCCCAACCTGCGATTCATGAGCTTCAGTAGAGGGAGAAGAGGGTGCCCTGGTAGCTCACTTGGCACTAACATTACTATGATGCTATTTGCAAGACTTCTACAAGGCTTTTCATGGAGCTTTGTGCCAGGAATCACAAAGATAGACTTCTCGGAAGCTGATGAACTCTCTCTCCCGAAGCCATTGCATCTGCATGCACAACCACGTCTATCTCATATTATGTACCCAAGGCTTGTTCATCATGATGCATAG 1596 41.17 MDAFFVLLFMPFIFVMFSQCYYRKRKHSNGEAPELPPGPKPWPLVGCLPTMLTTNLPTYQWIHAVMKQFNAEIACIRLGSIYIIPVASPQLALEFLKTYDSIFASRSSISNTVDTLSHRYLTAAFSPLGKQWRKMRRILASEILNSSTLHRMLGHRNAEADTLLRYIFSQTSNRDGAVVNLRSITQHYCGNIIRRMLFNKRYYGKGREDGGPTFEEEEHNQALLTILKHVNAFSTSDFMPWLKPFDLDGHQKIMKNALNVVQKYDEPIIDERVQRWKDGKMEGVKEDILNILISLKDENAKPLLSVAEIKAQITVSNELQIATIDNPSNAVEWAMAELLNQPKILEKAIEELDKVVGRERLVQEYDIPNLKYLTACIRESFRLHPFSPFNVPHVSNTDIIVAGYFIPKGSEVLLSRISLGRNPRIWEDPMRFNPERHLNDRTVELGLLEPNLRFMSFSRGRRGCPGSSLGTNITMMLFARLLQGFSWSFVPGITKIDFSEADELSLPKPLHLHAQPRLSHIMYPRLVHHDA 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4722630 4724387 + CmoCh10G009450.1 Cmo10g00945 390291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g00945 531 Gene3D Cytochrome P450 29 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00945 531 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 522 - -
Cmo10g00945 531 Pfam Cytochrome P450 36 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00945 531 PANTHER PHENYLALANINE N-MONOOXYGENASE 11 522 - -
Cmo10g00945 531 SUPERFAMILY Cytochrome P450 36 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00945 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Cmo10g00945 531 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00945 531 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00945 531 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00945 531 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00945 531 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g00945 531 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00938 Cmo-Chr10:4694525 Cmo10g00945 Cmo-Chr10:4722630 0 dispersed
Cmo10g00939 Cmo-Chr10:4694587 Cmo10g00945 Cmo-Chr10:4722630 1.86E-17 dispersed
Cmo10g00942 Cmo-Chr10:4709321 Cmo10g00945 Cmo-Chr10:4722630 0 dispersed
Cmo10g00945 Cmo-Chr10:4722630 Cmo01g00033 Cmo-Chr1:116681 1.24E-84 dispersed
Cmo10g00945 Cmo-Chr10:4722630 Cmo10g00946 Cmo-Chr10:4731225 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g00945 - K12153 cpep:111780516 955.281