Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g01015 ATGTCGTCGAGAGGAGGGTCGGATCAGCCTCCTCCATTGCAGAGGAGGATCACGAGGACACAGACGACGGGGAATTTCGGCGAGTCGGCGTTCGACAGTGAAGTTGTACCGTCATCGCTCAAGGAGATTGCGCCAATTCTTCGTGTGGCTAATGAGGTCGAGTCGAGCAATCCCAGAGTTGCGTATCTATGTCGGTTCTATGCATTTGAGAAAGCACATAAGTTAGATCCAACTTCTAGTGGGCGTGGTGTTCGGCAATTTAAAACTGCTCTACTTCAACGGCTCGAAAGGGAGAATGATCCAACCTTAATGGGAAGAGTAAAGAAAAGTGATGCCCGTGAAATGCAGAGCTACTATCAACATTATTATAAAAAGTACATCCAAGCTTTGCAAAGTGCTGCTGATAAAGCCGATCGTGCTCAGCTTACCAAGGCCTATCAAACTGCTAATGTACTCTTTGAAGTTTTGAAGGCCGTTAACATGACTCAGTCCATTGAAGTTGATCGTGAGATTTTGGAAGCACAAGATAAAGTTGCAGAGAAAACACAGATCTTTCTCCCATATAATATTCTTCCTCTTGATCCTGATAGTGCAAGTCAGACGATTATGAGATACCATGAGATCCAAGCTTCGGTTATTGCGCTTCGTAACATTAGGGGCCTTATTTGGCCAACTGATCACAAGAGGAAAGATGGCGAAGATATCTTGGATTGGCTCCAAGCAATGTTTGGGTTTCAGGAAGGCAATGTGGCAAATCAAAGGGAGCACCTTATACTATTACTTGCAAATGTACACATTCGGCAGTTTCCGAAGTCAGATCAGCAGCCCAAGCTGGATGAACGTGCTGTGACTGAAGTAATGAAGAAGCTTTTCAAGAACTACAAAAAATGGTGCAAGTATTTGGATCGTAAAAGTAGTCTTTGGTTACCTACAATACAACAGGAAGTGCAACAAAGGAAACTTCTATACATGGCTTTATATCTTCTAATTTGGGGAGAAGCCGCAAATTTGAGATTCATGCCCGAGTGTCTTTGTTATATATACCATCATATGGCGTTCGAGTTATATGGCATTCTAGCTGGGAATATCAGCCCTATGACAGGAGAGAATGTCAAGCCAGCTTATGGTGGGGAAAATGAAGCTTTTTTGCATAAAGTTGTGACTCCCATTTATCAAGTGATTGCAAAGGAAGCTGCAAGGAGCAAACAAGGGAAATCAAAACATTCCCAGTGGAGGAATTATGATGATTTAAATGAATATTTCTGGTCAATCGATTGTTTCCGTCTAGGGTGGCCAATGCGTGCAGATGCGGACTTCTTTCGCCTTCCGCACGATCAAATTCATGCAGACAGAAGTGGGGAGAACAAGGCTCTTTCGAAAGATCGATGGGTGGGGAAAGTTAATTTTGTTGAAATAAGGTCATATTGGCATATTTTCAGAAGCTTTGATCGTATGTGGAGCTTCTTTATACTTAGCTTGCAGGCGATGATAATTGTAGCCTGGAATGGCTCTGGGCAACCAAGTGCAATCTTTAATGTTGATGTGTTCATGAAAGTTTTAAGTGTCTTCATTACTGCTGCCATACTGAAGCTTTGTCAAGCTGTTCTTGATGTAATTCTTAGTTGGAAAGCCCACCGGAGCATGTCGTTTTATGTCAAGTTGAGATATATCTTAAAGGTGGTTTCCGCTGCTGCGTGGGTGGTAATTCTTCCTGTGACATATGCTTATAGCTGGGAAAATCCATCTGGGTTTGCTCAAACTATCAAAGGCTGGTTTGGTGGCAACACTTCAAATTCACCCTCCTTGTTTATCTTGGCTATTGTGATCTATTTGTCTCCGAATATGCTAGCGGGTTTATTCTTTTTATTCCCTTTTATTCGTCGGTTTCTTGAGAGATCCAACTACAGAATTGTGATGCTCGTAATGTGGTGGTCACAGCCTCGACTTTATGTTGGCAGAGGAATGCATGAAAGTACATTTTCTCTTGTCAAGTATACATTATTCTGGGTGCTTCTTATTGCAACCAAGTTGACATTCAGTTATTATATAGAGATAAAGCCTCTAGTAGGTCCAACAAAAGCAATCATGAGCGTTCGAATAACTGTCTTCCAATGGCATGAGTTTTTTCCTCAAGCTAAAAACAATATTGGTGTTGTCATTGCACTCTGGGCTCCCATTATTCTTGTTTATTTTATGGATGCCCAGATTTGGTATGCCATATTTTCCACATTATTTGGTGGTATTTATGGTGCATTTCGTCGCCTCGGAGAGATTCGTACGTTGGGAATGCTCAGGTCTCGTTTCGAGTCTCTGCCTGGAGCTTTTAATGCCTGTTTGATTCCAGAGGAACAGGGCGAAACCAAGAAGAAAGGACTGAAGGCTACTTTTGCCCGAAACTTCTCAGTCATTTCATCTAACAAGGAGAAAGAGGGTGCAAAATTTGCTCAGCTGTGGAATAAAATAATCAGCAGTTTTCGAGAGGAAGATCTTATCAGTAATAGGGAAATGGACCTTTTGCTCGTTCCTTATTGGGCAGACACGGAGTTAGGCCTTATGCAGTGGCCTCCGTTTCTTCTTGCTAGTAAGATTCCAATAGCATTAGACATGGCTAAAGATAGCAACGGAAAGGACCGGGAGCTGAAAAAGCGAATCAATGCTGACAGCTACATGTCGAGTGCTATTCGTGAATGTTATGCCTCATTTAAGAAGATCATCAAGCTTTTAGTTCAAGGTGTTCGTGAGAAAGAGGTAATAAATTATATATTTACTGAGGTGGACAAACACATAGAAGAGAATACCTTAATAAGTGAGTTCAAGATGAGTGCTCTACCAAAGCTGTATGATCGTTTTGTCAAGCTTACAAAGTATTTGTTGGATAACAGGCAGGAGGACAAGGATGCTGTGGTGATTTTATTTCAGGACATGCTTGAAGATGTAACAAGAGATATCATGATTGAGGATCCTATTCCCAGTTTGCTCGAAACACTCGATGGAGGATATTCGCACGGAGGAAAGACTTCATTGGATCTATTTGCGTCCACTGGAGCCATAAAGTTTCCCGTTGATCAGACAGAAGCGTGGCAGGAAAAGATTAAACGACTCTATCTGTTGCTTACGACCAAGGAATCTGCCATGGATGTACCGTCCAACTTAGAAGCAAGAAGGCGAATCTCTTTCTTTTCGAATTCATTGTTTATGGATATGCCTGCAGCACCTAAAGTCCGGAACATGCTTTCGTTCTCTGTTCTAACTCCATACTACACGGAGGAGGTTCTATTTTCATTGCATGATCTAGAAGAGCGAAATGAAGATGGCGTTTCGATTCTTTTCTACCTACAAAAGATATATCCAGACGAATGGAAGAACTTCCTTGAACGACAGAAATGCAATAACGAAGAGGAATTAAAGGAAGTGAGTGAGCTGGAGGAAGAACTTCGACTCTGGGCGTCCTACAGAGGCCAAACGTTAACTAAAACGGTTCGAGGAATGATGTATTACCGAAAGGCTTTAGAGCTTCAAGCTTTTCTTGATACTGCTGAGGATCAAGATCTAATGGAGGGTTACAAGGCGGTCGAGTTGAACTCAGAAGAAAGTTCTAAGGGTGATAGATCATTATGGGCACATTGTCAAAGCAATATCTGA 3642 42.04 MSSRGGSDQPPPLQRRITRTQTTGNFGESAFDSEVVPSSLKEIAPILRVANEVESSNPRVAYLCRFYAFEKAHKLDPTSSGRGVRQFKTALLQRLERENDPTLMGRVKKSDAREMQSYYQHYYKKYIQALQSAADKADRAQLTKAYQTANVLFEVLKAVNMTQSIEVDREILEAQDKVAEKTQIFLPYNILPLDPDSASQTIMRYHEIQASVIALRNIRGLIWPTDHKRKDGEDILDWLQAMFGFQEGNVANQREHLILLLANVHIRQFPKSDQQPKLDERAVTEVMKKLFKNYKKWCKYLDRKSSLWLPTIQQEVQQRKLLYMALYLLIWGEAANLRFMPECLCYIYHHMAFELYGILAGNISPMTGENVKPAYGGENEAFLHKVVTPIYQVIAKEAARSKQGKSKHSQWRNYDDLNEYFWSIDCFRLGWPMRADADFFRLPHDQIHADRSGENKALSKDRWVGKVNFVEIRSYWHIFRSFDRMWSFFILSLQAMIIVAWNGSGQPSAIFNVDVFMKVLSVFITAAILKLCQAVLDVILSWKAHRSMSFYVKLRYILKVVSAAAWVVILPVTYAYSWENPSGFAQTIKGWFGGNTSNSPSLFILAIVIYLSPNMLAGLFFLFPFIRRFLERSNYRIVMLVMWWSQPRLYVGRGMHESTFSLVKYTLFWVLLIATKLTFSYYIEIKPLVGPTKAIMSVRITVFQWHEFFPQAKNNIGVVIALWAPIILVYFMDAQIWYAIFSTLFGGIYGAFRRLGEIRTLGMLRSRFESLPGAFNACLIPEEQGETKKKGLKATFARNFSVISSNKEKEGAKFAQLWNKIISSFREEDLISNREMDLLLVPYWADTELGLMQWPPFLLASKIPIALDMAKDSNGKDRELKKRINADSYMSSAIRECYASFKKIIKLLVQGVREKEVINYIFTEVDKHIEENTLISEFKMSALPKLYDRFVKLTKYLLDNRQEDKDAVVILFQDMLEDVTRDIMIEDPIPSLLETLDGGYSHGGKTSLDLFASTGAIKFPVDQTEAWQEKIKRLYLLLTTKESAMDVPSNLEARRRISFFSNSLFMDMPAAPKVRNMLSFSVLTPYYTEEVLFSLHDLEERNEDGVSILFYLQKIYPDEWKNFLERQKCNNEEELKEVSELEEELRLWASYRGQTLTKTVRGMMYYRKALELQAFLDTAEDQDLMEGYKAVELNSEESSKGDRSLWAHCQSNI 1213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5296282 5309987 + CmoCh10G010150.1 Cmo10g01015 390361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g01015 1213 Gene3D - 28 185 IPR023175 -
Cmo10g01015 1213 MobiDBLite consensus disorder prediction 1 30 - -
Cmo10g01015 1213 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 14 1211 - -
Cmo10g01015 1213 Pfam 1,3-beta-glucan synthase component 1140 1191 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cmo10g01015 1213 Pfam 1,3-beta-glucan synthase component 1047 1137 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cmo10g01015 1213 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 320 431 IPR026899 -
Cmo10g01015 1213 Coils Coil 1124 1144 - -
Cmo10g01015 1213 SMART FKS1_dom1_2 318 434 IPR026899 -
Cmo10g01015 1213 PANTHER CALLOSE SYNTHASE 3-RELATED 14 1211 IPR026953 GO:0003843
Cmo10g01015 1213 Pfam Vta1 like 42 171 IPR039431 -
Cmo10g01015 1213 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g01015 Cmo11g00826 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01338 Cmo-Chr1:10605734 Cmo10g01015 Cmo-Chr10:5296282 1.74E-98 dispersed
Cmo10g01015 Cmo-Chr10:5296282 Cmo11g00830 Cmo-Chr11:4187706 7.02E-35 dispersed
Cmo10g01015 Cmo-Chr10:5296282 Cmo11g00827 Cmo-Chr11:4154334 1.02E-11 wgd
Cmo10g01015 Cmo-Chr10:5296282 Cmo17g00901 Cmo-Chr17:8133105 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g01015 K11000 - csv:101216678 2295.39