Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g01016 ATGAAATTTACCTTTGTGGTATCATGTCAACAGTATGGTATTCAAAAGCAATCCGGTGACGCTCGTGCCCAGGATATTTTGAAACTAATGACAAAGTATCCATCGCTTCGAGTGGCGTACATCGACGAGGTAGAAGAACCTAGTAAAGACAAATCCAAGAAAAACCAGAAGACATATTATTCATCTCTTGTCAAGGCAGCTTCTCCCAAATCTATAAATGCTTCAGATCATGTACAATTGGATGAGATTATTTATCAGATAAAGCTCCCGGGTCCTGCAATCTTGGGTGAGGGAAAGCCAGAAAATCAGAACCACGCAATAATATTTACCCGTGGCGAAGGCTTGCAAACAATAGACATGAATCAGGATAATTACATGGAAGAAGCATTGAAGATGAGGAACTTGTTGCAAGAGTTTCTTAAAAAGCATGATGGTATAAGATACCCCTCTATTCTTGGACTTAGAGAGCATATATTTACTGGAAGTGTTTCGTCGCTTGCTTGGTTCATGTCTAATCAAGAAACGAGTTTTGTTACGATCGGTCAGAGACTTTTGGCGAATCCTCTCAAAGTTCGTTTCCACTACGGGCATCCAGATGTGTTCGATAGGCTCTTCCACCTAACTCGAGGGGGCGTCAGTAAAGCTTCCAAGGTTATCAATTTGAGTGAAGACATATTTGCTGGTTTCAACTCGACTCTTCGTGAAGGCAATGTCACTCATCACGAGTACATACAAGTTGGAAAAGGTCGAGATGTGGGCCTTAATCAGATTTCAATGTTTGAAGCAAAAGTAGCAAACGGGAACGGGGAGCAAACACTAAGTCGAGATATATACCGTCTCGGACACCGATTCGACTTCTTTCGAATGTTATCGTGTTACTTTACGACTATCGGATTCTATTTTAGTACTCTGATAACTGTACTCACAGTATACGTATTCCTTTACGGTCGTCTTTATCTCGTTCTTAGTGGACTCGAGAAAGGTTTGAGTACTCAACCGGCCATTCGAGACAATAAGCCTCTGCAAGTTGCACTTGCTTCTCAATCTTTTGTCCAGATTGGATTTTTGATGGCATTGCCTATGCTGATGGAGATTGGTTTGGAAAGGGGATTCCGTACTGCATTGAGTGAGTTCATATTGATGCAATTACAGCTAGCCCCTGTCTTTTTTACCTTCTCTCTTGGAACAAAGACTCACTATTATGGGAGGACATTACTTCACGGAGGCGCTAAATACAGGCCTACGGGTCGTGGGTTCGTCGTGTTTCATGCCAAGTTTGCTGATAACTACAGGCTCTACTCTCGTAGCCACTTCGTTAAAGGTCTCGAGCTCATGATTCTACTTCTTGTGTACCAGATATTTGGTCATACTTATAGAAGTGCAGTTGCATATGTGTTGATTACTGTATCTATGTGGTTTATGGTCGGTACGTGGTTGTTTGCTCCGTTTCTCTTCAACCCTTCTGGTTTCGAGTGGCAAAAGATCGTCGATGATTGGACGGATTGGAATAAATGGATAAGTAATCGTGGTGGCATTGGTGTTCCACCGGAAAAAAGTTGGGAATCGTGGTGGGAGGAAGAACAAGAGCATTTACGACACTCGGGAATGCGCGGTTTGGTAGCTGAGATATTGTTAGCTTCTCGATTCTTTATCTATCAGTATGGTTTGGTCTATCATCTTAGCATTACGCAGCGCGTAAATACGAAAAGTTTTCTGGTTTATGGCATATCATGGCTGGTGATCGTTCTAGTTCTGTTTGTAATGAAGACTGTATCAGTTGGAAGGCGAAAATTCAGTGCAGATTTCCAACTCGTGTTCCGTTTGATAAAGGGCTTAATTTTCCTAACGTTCGTCGCGATTCTCGTCACCTTGATCGCTCTTCCTCATATGACCGTGCAGGATATCATTGTTTGCATACTTGCTTTCATGCCAACTGGTTGGGGCATGCTTTTGATTGCACAAGCATTGAAACCGCTCGTTCAACGAGCGGGCATCTGGGGCTCCGTAAGGACACTCGCTCGTGGTTACGAGATCATCATGGGTTTGCTTCTGTTCACCCCGGTCGCATTCCTTGCCTGGTTTCCATTTGTTTCAGAATTCCAGACCCGGATGCTCTTCAACCAAGCGTTCAGCAGAGGACTGCAGATTTCTCGTATTCTTGGCGGGCATCGGAAGGATCGATCGTCCCAAAACAAAGACTAA 2202 43.46 MKFTFVVSCQQYGIQKQSGDARAQDILKLMTKYPSLRVAYIDEVEEPSKDKSKKNQKTYYSSLVKAASPKSINASDHVQLDEIIYQIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKMRNLLQEFLKKHDGIRYPSILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKVANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTIGFYFSTLITVLTVYVFLYGRLYLVLSGLEKGLSTQPAIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERGFRTALSEFILMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRPTGRGFVVFHAKFADNYRLYSRSHFVKGLELMILLLVYQIFGHTYRSAVAYVLITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEEEQEHLRHSGMRGLVAEILLASRFFIYQYGLVYHLSITQRVNTKSFLVYGISWLVIVLVLFVMKTVSVGRRKFSADFQLVFRLIKGLIFLTFVAILVTLIALPHMTVQDIIVCILAFMPTGWGMLLIAQALKPLVQRAGIWGSVRTLARGYEIIMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHRKDRSSQNKD 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5309989 5317836 + CmoCh10G010160.1 Cmo10g01016 390362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g01016 733 Pfam 1,3-beta-glucan synthase component 1 593 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cmo10g01016 733 PANTHER CALLOSE SYNTHASE 3-RELATED 1 730 IPR026953 GO:0003843
Cmo10g01016 733 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 730 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g01016 Cmo-Chr10:5309989 Cmo11g00830 Cmo-Chr11:4187706 0 dispersed
Cmo10g01016 Cmo-Chr10:5309989 Cmo11g00826 Cmo-Chr11:4114229 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g01016 K11000 - csv:101216678 1421.37