Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g01025 ATGTTCGGGATGACAGTAGAGGCGACGACCGTGACAACAGTGGCGGTGGTAGTCACGATGGCGGGGTGGTTGCTCGGTGGAGTTGAGGGTAGAGAACCAGTGTTGCATAGAGTTGGAGGAGGAAAATACACTTGGACAACTAATGTTAACTTCACTGATTGGTCAATTCACGAGCACTTTTACGTTGGTGATTGGCTCTATTTCGGGTTCGATAAACGTATCTACAACGTGCTACAAGTAAACAAAACGAGCTACGACAGTTGCAACGAGAATGATTTCGTTTTCAACGTGACGAGAGGGGGACGAGACGTGTTCAATCTAACACAAGCAAAGCCATACTACTTTCTAAGTGGAAGAGGGTTTTGTTTTCAAGGAATGAAGGTTGCTATCTTTGTTGAAGACTCGCCTCCCATTTCATCACCCAAAATTTCAAACCATTCTTCATCTATTCAACCATTAAAGCCTCTCTCATCCCTCTCGGTATTGATCACGCTTGCCTTCACTAAAATCGTTCTTCTAAATTAG 525 44.19 MFGMTVEATTVTTVAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFDKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAIFVEDSPPISSPKISNHSSSIQPLKPLSSLSVLITLAFTKIVLLN 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5380423 5381059 - CmoCh10G010250.1 Cmo10g01025 390371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g01025 174 PANTHER BLUE COPPER PROTEIN 13 149 IPR039391 GO:0009055
Cmo10g01025 174 Gene3D - 35 141 IPR008972 -
Cmo10g01025 174 Pfam Plastocyanin-like domain 45 126 IPR003245 GO:0009055
Cmo10g01025 174 ProSiteProfiles Phytocyanin domain profile. 34 134 IPR003245 GO:0009055
Cmo10g01025 174 PANTHER EARLY NODULIN-LIKE PROTEIN 20 13 149 - -
Cmo10g01025 174 SUPERFAMILY Cupredoxins 35 132 IPR008972 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g01025 Cmo-Chr10:5380423 Cmo11g01202 Cmo-Chr11:7081768 9.41E-46 dispersed
Cmo10g01025 Cmo-Chr10:5380423 Cmo15g01241 Cmo-Chr15:8537369 9.76E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g01025 - - cmos:111461613 332.028