Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g01025 | ATGTTCGGGATGACAGTAGAGGCGACGACCGTGACAACAGTGGCGGTGGTAGTCACGATGGCGGGGTGGTTGCTCGGTGGAGTTGAGGGTAGAGAACCAGTGTTGCATAGAGTTGGAGGAGGAAAATACACTTGGACAACTAATGTTAACTTCACTGATTGGTCAATTCACGAGCACTTTTACGTTGGTGATTGGCTCTATTTCGGGTTCGATAAACGTATCTACAACGTGCTACAAGTAAACAAAACGAGCTACGACAGTTGCAACGAGAATGATTTCGTTTTCAACGTGACGAGAGGGGGACGAGACGTGTTCAATCTAACACAAGCAAAGCCATACTACTTTCTAAGTGGAAGAGGGTTTTGTTTTCAAGGAATGAAGGTTGCTATCTTTGTTGAAGACTCGCCTCCCATTTCATCACCCAAAATTTCAAACCATTCTTCATCTATTCAACCATTAAAGCCTCTCTCATCCCTCTCGGTATTGATCACGCTTGCCTTCACTAAAATCGTTCTTCTAAATTAG | 525 | 44.19 | MFGMTVEATTVTTVAVVVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFDKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAIFVEDSPPISSPKISNHSSSIQPLKPLSSLSVLITLAFTKIVLLN | 174 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5380423 | 5381059 | - | CmoCh10G010250.1 | Cmo10g01025 | 390371 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g01025 | 174 | PANTHER | BLUE COPPER PROTEIN | 13 | 149 | IPR039391 | GO:0009055 | |
Cmo10g01025 | 174 | Gene3D | - | 35 | 141 | IPR008972 | - | |
Cmo10g01025 | 174 | Pfam | Plastocyanin-like domain | 45 | 126 | IPR003245 | GO:0009055 | |
Cmo10g01025 | 174 | ProSiteProfiles | Phytocyanin domain profile. | 34 | 134 | IPR003245 | GO:0009055 | |
Cmo10g01025 | 174 | PANTHER | EARLY NODULIN-LIKE PROTEIN 20 | 13 | 149 | - | - | |
Cmo10g01025 | 174 | SUPERFAMILY | Cupredoxins | 35 | 132 | IPR008972 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g01025 | Cmo-Chr10:5380423 | Cmo11g01202 | Cmo-Chr11:7081768 | 9.41E-46 | dispersed | |
Cmo10g01025 | Cmo-Chr10:5380423 | Cmo15g01241 | Cmo-Chr15:8537369 | 9.76E-12 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g01025 | - | - | cmos:111461613 | 332.028 |