Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g01033 ATGGATGGTTATCGACTATTTTGGCCGTTGGGTGGCTTTTACTTGACTATTTTTGTCTCTCACCGATTGGCTAGAATCTTACGGAGTACTGGAGAAGGCTTGATGACATACAAGCAATTTATTCAAGAGCTTGAAGATGATATACTGCCTGCAGAAGCTGAGCGCAGATATCAAGAATACAAGTCCGAGTATATTACAACACAGAAACAATCCTTTTTTGATTCTCATAAGGATGAAGAATGGAGGAATGAACTTGCACAAAGAACTGCTAAGGATTTTTTGATTGACCTGCAAAGTGGAACACTGGAAGTAGGTCCAGGGATCAATGCAGCAGCTACAAATAAATCAGGGCAGACTAGTGAACCAAATTCAGATGATGAAGCAGACAATGATGGCAAACGGAGGCGTCATGGTAGAGGACCAGCAAAAGAAATGGATTTTCTTTCTGCTGCTCCTAAGGCCCACCCTGTTAGCTCTGAACCAAGACGAATCCAAATTGACATTGAACAAGCTCAATCTCTTGTCCGTAAACTTGATTCTGAGAAAGGAATAGAAGAAAATATTTTATGTGGTTCTGATAGTGACAAACTAGGTCGGGATAGAGCACATGGCGGCTCTTCTGGCCCAGTCATAATCATACGAGGGTTGACAACCGTTAAAGGGTTGGAGGGTGTTGAGCTATTGGACACGCTTCTCACATATCTGTGGCGCATCCATGGCTTAGATTACTATGGAATGGTTGAGACTAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGAAAGAACTCTAACATGGCTGGTGGTGCAGATGAATGGGAGAAGAAACTTGATTCGCGTTGGCAAGAGAGATTGAGAGGTCAAGATCCGTTGGAAACGATGACTGCCAAGGATAAAATAGAGGCTGCTGCTCTTGGAGCTTTTGACCCATATGTTCGTAAGATAAGAGATGAGAAATATGGATGGAAGTATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCTCCCGAGTTTGTACACAAGCATCTTAACTTGAAACATCCAGAGCTTGTGATGGAGCTGACTTCAAAAGTGCGTGAAGAGCTGTATTTCCAAAATTACATGAATGATGCAGATGCTCCTGGAGGGACGCCTGTTATGCAACAATCGCTTCCGAAGGATAAGCCACAGAGACGTAGGATGAATTTAGATGCTCGGCTGAAGGATGACAGAGGCAATCGCAGGGACCGTGATAATTGGGCGAATGGGGGTGACAGATTTGATAGATCTGAGAATCCACAATCAAATGATTTCCAATCAGCAAATGATGGTACGGATGGTGGAAACCTTGATGATCCTATGTTTGATACTTTTGGTGGACAAGGGAGGCATGTTGCTCCTTTTGCCTCTGAAATGCCACCGCCAGTGCTTATGCCTGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTCCCTGCTCCACCTGAAGTTGCAATGAGAGTGTTGCGGGAACAAGGAGGTCCACCTCCATTTGAGGGTGGTGGTAGAAATGGAAGGCCAGGACCTCAATTAGGTGGATCTGCTCCAATTCTTGCCCTATCTCCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGTTATCAAGACCTAGATGCCCCTGAGGACGAAGTGACTGTAATAGATTATAGAAGCTTGTAG 1683 44.92 MDGYRLFWPLGGFYLTIFVSHRLARILRSTGEGLMTYKQFIQELEDDILPAEAERRYQEYKSEYITTQKQSFFDSHKDEEWRNELAQRTAKDFLIDLQSGTLEVGPGINAAATNKSGQTSEPNSDDEADNDGKRRRHGRGPAKEMDFLSAAPKAHPVSSEPRRIQIDIEQAQSLVRKLDSEKGIEENILCGSDSDKLGRDRAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAGGADEWEKKLDSRWQERLRGQDPLETMTAKDKIEAAALGAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDARLKDDRGNRRDRDNWANGGDRFDRSENPQSNDFQSANDGTDGGNLDDPMFDTFGGQGRHVAPFASEMPPPVLMPVPGAGPLGPFVPAPPEVAMRVLREQGGPPPFEGGGRNGRPGPQLGGSAPILALSPGFRQDPRRIRSYQDLDAPEDEVTVIDYRSL 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5431760 5436436 + CmoCh10G010330.1 Cmo10g01033 390379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g01033 560 MobiDBLite consensus disorder prediction 126 143 - -
Cmo10g01033 560 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 31 560 - -
Cmo10g01033 560 MobiDBLite consensus disorder prediction 505 529 - -
Cmo10g01033 560 MobiDBLite consensus disorder prediction 106 164 - -
Cmo10g01033 560 Pfam Arsenite-resistance protein 2 261 463 IPR007042 -
Cmo10g01033 560 Pfam SERRATE/Ars2, N-terminal domain 38 82 IPR021933 -
Cmo10g01033 560 PANTHER ARSENITE-RESISTANCE PROTEIN 2 31 560 IPR039727 GO:0006397
Cmo10g01033 560 MobiDBLite consensus disorder prediction 389 421 - -
Cmo10g01033 560 MobiDBLite consensus disorder prediction 372 455 - -
Cmo10g01033 560 ProSitePatterns Zinc finger C2H2 type domain signature. 327 350 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g01033 Cmo-Chr10:5431760 Cmo11g00813 Cmo-Chr11:4031605 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g01033 - - cmax:111485005 1013.06