Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g01063 ATGGAAGATTCCTCCAACTCAGGTGATGATCGGAAGAATACCCGTTTCTACCACCCTTACCAAGACCTACACGTTCCGATCACAAAGCTCTACGAGCTCCCCACCGCTCCCGAGCATCTTTTCTTCGAAGAGGCCGCCAGGCCCCACCGTTCTTGGGGCGAAAATCTCCAGTACTATACTGGAATTGGCTACCTCTCTGGCGCCCTTCTCGGCGGCGCCAGAGGCTCTATTCAGGGTCTCAGAGCGGCAGAGCCTGGCGACTCTGTCAAGCTCCGTCTCAATCGAGTTCTCAATTCTGGGGGCCAGCTCGGTCGGAGGGCTGGGAACTCTCTTGGGATTCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTACTGATGATGTTTTGAACAGTATTGTCGCCGGATTGGGGACTGGTGCGCTTTACAAGGCGGCTTCCGGGCCGAGGTCAGCCGCTATCGCCGGTGCCATTGGAGGGATTGCTGCTGCAGCTGCAGTTGCGGGAAAGCAGGCAGTTAAGAGATATGTGCCGATATAG 555 54.95 MEDSSNSGDDRKNTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLESGVIHLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5650655 5651209 + CmoCh10G010630.1 Cmo10g01063 390409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g01063 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
Cmo10g01063 184 PANTHER TIM23 6 184 IPR045238 GO:0022857
Cmo10g01063 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 6 184 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g01063 Cmo-Chr10:5650655 Cmo17g00685 Cmo-Chr17:7012979 2.16E-70 dispersed
Cmo10g01063 Cmo-Chr10:5650655 Cmo11g01005 Cmo-Chr11:5390125 5.28E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g01063 K17794 - csv:101211511 303.908