Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g01116 ATGGAGATATTGGGGAGTATTAGGGTTTCCATTTGGGCGGTGGCTGTGGTGTGTTTAGCCGTATGGGGATGGAGATTTTTGAACTGGATTTGGCTGAGGCCCAAGAAGCTTGAGAGGTCCCTCAGAAACCAAGGCTTCGCCGGGAATCCTTACCGGCTTCTCTCCGGCGACATGAAGGACATAGCCGCCATGAGGGAGCAGGCCATATCCAGCCCCATGAACTTCTCCCATGATATTGCTCCACGTGTCATCCCCTCCATAAATCATACCATCCACAAATATGGAAAGAATTCATTCATGTGGATTGGACCATATCCAAGAGTGCACATCATGGACCCTGATCAACTCAAAGCTGCACTTTCTTTAATGCATGATGTTCAAAAGCCGTCTATCAACCCTCTTTCAAGGTTGCTTTTCGATGGACTTACTGATCATGAAGGACCCAAATGGGTTAAGCATAGAAAGATAATCAATCCAGCCTTTCATTTCAAACACTTGAAGGGCATGGTGCCTGCAATGTGTGAGAGTTGCACTGAGATGATTAGGAAATGGGAAGAAGTGGTCTCAAAAGATGGATATTATGAATTGGATGTGATGCCTCATTTGGGAAACTTGGCAGCTGATGTGATTTCTCGAACAGCATTTGGAAGCAGCTATGAAGAAGGAAAAATGATCTTTATACGTCTAAAACAACTTATCAATCTAGTCGTTAAAGCTACATCTACAGTTTACATACCCGGATGGAGGTTTGTACCAACAAAGTCGAACAATAGAATGAAAAAGATAAGCAAAGAATTAAGAGACTTGCTCTTGGATGTTATCAACAAAAGGCAAAGGGCTATGATGGCAGGTGCAGCTATGCATAATGATCTATTAAGCATCCTCTTACAATCAAATTTGAAAGAAATTCGAGAGCACGGAAATAACGATGTCGGAATGAGTATCGAAGACATAGTAGACGAGTGTAGAGTTTTTTACCTTGCTGGCCAAGAAACCACAGCAATGCTACTAATTTGGACAATGGTTTTATTGAGCTCATACACAAGATGGCAAGATCTAGCAAGAGAAGAGGTCCTACAAGTGTTTGGTAACAACAAACCAGATTTTGATGGTTTAAATGGCCTAAAAATTGTTACTATGATATTGAACGAAGTCTTGAGATTATACCCACCAGCAGCATTGGTTTCTCGTCTCGTTCAAAATGAAACAAAGCTTGGAAAATTGAGTTTTCCAGCTGGAGTGATGCTGAGTTTTCCAATTATTCTTATCCATCGTGATAAGAAGTTATGGGGTGATGATGCAAATGAGTTTAATCCCGACAGATTTACTGAGGGAGTTTCAAAAGCGACACAAAATCAAGCTGGGTTCTTTCCGTTTGGATGGGGTCCTCGCATATGCATCGGACAGAACTTTGCCATAATTGAGGCCAAAATTGCTCTATCCATGATTCTACAACACTTTTCTTTTGAACTTTCATCGTCTTATACGCATGCTCCAACATCCATTTTAATTACTAGACCTCAACATGGAGCTCATATCATGCTACGTAAACTTTAG 1557 41.36 MEILGSIRVSIWAVAVVCLAVWGWRFLNWIWLRPKKLERSLRNQGFAGNPYRLLSGDMKDIAAMREQAISSPMNFSHDIAPRVIPSINHTIHKYGKNSFMWIGPYPRVHIMDPDQLKAALSLMHDVQKPSINPLSRLLFDGLTDHEGPKWVKHRKIINPAFHFKHLKGMVPAMCESCTEMIRKWEEVVSKDGYYELDVMPHLGNLAADVISRTAFGSSYEEGKMIFIRLKQLINLVVKATSTVYIPGWRFVPTKSNNRMKKISKELRDLLLDVINKRQRAMMAGAAMHNDLLSILLQSNLKEIREHGNNDVGMSIEDIVDECRVFYLAGQETTAMLLIWTMVLLSSYTRWQDLAREEVLQVFGNNKPDFDGLNGLKIVTMILNEVLRLYPPAALVSRLVQNETKLGKLSFPAGVMLSFPIILIHRDKKLWGDDANEFNPDRFTEGVSKATQNQAGFFPFGWGPRICIGQNFAIIEAKIALSMILQHFSFELSSSYTHAPTSILITRPQHGAHIMLRKL 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7666891 7670625 + CmoCh10G011160.1 Cmo10g01116 390462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g01116 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Cmo10g01116 518 Gene3D Cytochrome P450 76 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g01116 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g01116 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g01116 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g01116 518 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g01116 518 Pfam Cytochrome P450 91 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g01116 518 SUPERFAMILY Cytochrome P450 80 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g01116 518 PANTHER CYTOCHROME 11 515 - -
Cmo10g01116 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 515 - -
Cmo10g01116 518 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g01116 518 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g01116 518 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g01116 518 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g01116 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo10g01116 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00674 Cmo-Chr9:3349383 Cmo10g01116 Cmo-Chr10:7666891 0 dispersed
Cmo09g00676 Cmo-Chr9:3358471 Cmo10g01116 Cmo-Chr10:7666891 0 dispersed
Cmo09g00677 Cmo-Chr9:3365428 Cmo10g01116 Cmo-Chr10:7666891 0 dispersed
Cmo10g00784 Cmo-Chr10:3635735 Cmo10g01116 Cmo-Chr10:7666891 3.35E-177 dispersed
Cmo10g01116 Cmo-Chr10:7666891 Cmo11g01041 Cmo-Chr11:5744782 0 dispersed
Cmo10g01123 Cmo-Chr10:8478349 Cmo10g01116 Cmo-Chr10:7666891 1.75E-130 dispersed
Cmo10g01124 Cmo-Chr10:8712183 Cmo10g01116 Cmo-Chr10:7666891 6.82E-60 dispersed
Cmo10g01113 Cmo-Chr10:7459845 Cmo10g01116 Cmo-Chr10:7666891 3.16E-43 proximal
Cmo10g01114 Cmo-Chr10:7462670 Cmo10g01116 Cmo-Chr10:7666891 1.70E-139 proximal
Cmo10g01116 Cmo-Chr10:7666891 Cmo10g01122 Cmo-Chr10:8477677 8.35E-56 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g01116 - - csv:101213974 781.556