Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g01118 ATGAAACACATTTTCAAGAAGTTTCATATCGGAAGCAATCACGATCCGAGTCGATCCAACGAGAATCCGTTGCCCGTAGCAGCGTCGTCGTCGTCGTCGTCGTCGTCTCCATGTGTTTCTGATAATCGTCCTGCAACTGCTCCCGGCCTCACTTCTGGCAACTCTCCATTGAGTCCTTCGTCTTCGCCGTCGCTGGCAACAACTCCTCCAGGCGGCGGAAGTGTGACTCCGGTTTCGGTTGCTCCCAATCGGTCTGATTACTTTTCTTCAGAGGAGGAGTTTCAGGTTCAGCTTGCCCTAGCTATTAGCGCCTCCAATTCGGACTTTCGGGATGATCCGGAGAAGGATCAAATTCGTGCTGCGTCGCTTTTGAGCTTCGGTAATCATCGAATTGATTCCACTGCCAGAGACCAGGGAGATGCTGCCGAGGTGCTCTCCAGACAATATTGGGAATACAATCTGCTTGGCTATGAAGATAAAGTGGTCAATGGGTTTTATGATGTCCTCTCCACGGATGCAGCAGTCCAAGGAAAAATTCCATCTCTATCTGATATTGAAGCAAGCTTCGGTAGTTCTGGCTTTGAAGTCGTGATGGTCAATATGACTGTTGATCATGCATTAGAAGAGCTAGTGCAAATTGCTCAATGTATTGCAGATTGCCCTGGTACTGAGGTGAGGGTTTTGGTTCAAAGGCTTGCTGAGCTTGTTATGGGACATATGGGCGGACCTGTAAAGGACGCCCATTTTATGCTAGCAAGGTGGATGGAAAGAAGCACAGAGTTAAGGACTTCTCTTCACACCAGTGTATTGCCTATTGGTTCCATCAATATTGGCCTCTCAAGACATCGTGCATTGCTTTTCAAGGTGTTAGCTGACAGTATCAAGATGCCTTGTAGGCTTGTTAAAGGTAGTCACTATACAGGTGTCGAAGAAGATGCTGTGAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTAATGGCAGCTCCTGGAACACTTATACCAGCAGACATATTAAGTGCAAAGGATACTACTTCCATTAAGCCTTACAACCCTAAAGTAAGCAAAATTCCTTCTCTTCACCACTATAATGATGCTGGAATTTCTTCTACGAAGCCAACATCATTACTTGAGGAAGGCAGCAGTCAAAACTTTGAAGCAGAGGCCAGCTCACTGGTGGATGAGAAACTGAGCTATGGAAGGACAGAGTCTGTGCCGTCAAGCTCAGGTACTGAGACTTCTCGATACAAAGGGGCCCATTTTGGTGATAGTAATGTTAGACTGAATGTCAATGTAGTTTCACTTGGTCAAAGCTCCGAGGATTCCAAAAATCTTTTTGAAGATCTTAATCCTTTCCAAATAAAAGGAACTGGAAAAAGTTTCATTCTTAACAAATCCTCTGACAATAAAATTGAGGAGCTTCGGAAACCCGCTATTGGACATGCTCCTGTGCCGTTATGGAAAAACCGGGTTGTTTTCAATGCAGTTCCCAAGAATAAAGAGTATGATTACATGGAGGGCCGTTTTCCAAGAACTAATTGTAGACCTAATGATCATAATACAGCATCGTCTTTTTCTGCAAGCTCTTCTGTCTCTGAAAATGTTAATCCTAGTGGTTCAGGAATATCCATTGACTCGAGGGTATCGAATAGAAGTGCTGAAGTTGGAAGTTCTTCATCTAATATGAACTCATGGTCGACATCCACAATGATAGAGTCTAATATTTTGCCTTTGATTGACGAGCAGAACAGAAAACTCAATGGAGCATATTCTGGAAATATAGACATGCAGGATGAAAAGGTAGATGCCGTTGTTGGACGTGATAATTTAAGCAGATTTGATAACCGTAGAAAGTTCACATATGATAGATCTGTTGGGACCAATTTGATATTGAAGGATCCGGGAAGTCCCAGCATATTGATTGATCCAAGTTCGAGGAGTAGGTTTGAGCAAGTTTATGATGACGTGGATGTAGGCCAATGTGAAATCCAATGGGAGGACCTCGTTATTGGGGAAAGGATTGGACTAGGTTCATATGGAGAAGTCTACCATGCTGATTGGAATGGCACAGAGGTTGCTGTGAAGAAATTCTTAGACCAGGATTTTTCTGGCGCTGCTTTAGCTGAGTTCAAAAGAGAAGTACTGATAATGCGGCAGCTACGTCATCCAAATATTGTTCTTTTTATGGGTGCTGTCACTCGTCCTCCTAACCTTTCCATTGTTACTGAGTTTCTTCCAAGAGGAAGCTTGTACCGGATCATTCACCGACCAAATTGTCAAATTGATGAAAGCCGCAGAATAAAAATGGCCCTTGATGTGGCAAGGGGCATGAATTGCTTGCATACAAGTAATCCAACAATTGTTCACCGAGATCTGAAGTCACCGAATCTTTTGGTTGATAAGAACTGGAATGTAAAGGTATCAGATTTTGGGTTGTCACGCTTGAAGCACAGTACATTTTTGTCATCCAAGTCAACTGGAGGAACGCCTGAGTGGATGGCACCAGAAGTTCTCCGGAATGAGCCTTCAAATGAGAAGTGTGACGTTTATAGCTTTGGAATCATTCTATGGGAACTTGCTACATTGAGACTGCCTTGGAGTGGGATGAATCCTATGCAAGTTGTTGGTGCAGTCGGTTTCCAGAATCGACGACTCGAAATACCCAAGGAAGTGGATACCACGGTTGCAAGGATTATCTGGGAATGCTGGCAAACCGATCCAAACTTGCGCCCCTCATTTGCACAATTAGCCAATATTTTGAAGCCACTGCAGCGGCTCGTCATGCCGCTGCATTCGGACCAGCCGAGTTCATCGGTGCTGCAAGAGATATCTGTAAATTCTACACCTTGA 2859 44.11 MKHIFKKFHIGSNHDPSRSNENPLPVAASSSSSSSSPCVSDNRPATAPGLTSGNSPLSPSSSPSLATTPPGGGSVTPVSVAPNRSDYFSSEEEFQVQLALAISASNSDFRDDPEKDQIRAASLLSFGNHRIDSTARDQGDAAEVLSRQYWEYNLLGYEDKVVNGFYDVLSTDAAVQGKIPSLSDIEASFGSSGFEVVMVNMTVDHALEELVQIAQCIADCPGTEVRVLVQRLAELVMGHMGGPVKDAHFMLARWMERSTELRTSLHTSVLPIGSINIGLSRHRALLFKVLADSIKMPCRLVKGSHYTGVEEDAVNIIKLEDEREFLVDLMAAPGTLIPADILSAKDTTSIKPYNPKVSKIPSLHHYNDAGISSTKPTSLLEEGSSQNFEAEASSLVDEKLSYGRTESVPSSSGTETSRYKGAHFGDSNVRLNVNVVSLGQSSEDSKNLFEDLNPFQIKGTGKSFILNKSSDNKIEELRKPAIGHAPVPLWKNRVVFNAVPKNKEYDYMEGRFPRTNCRPNDHNTASSFSASSSVSENVNPSGSGISIDSRVSNRSAEVGSSSSNMNSWSTSTMIESNILPLIDEQNRKLNGAYSGNIDMQDEKVDAVVGRDNLSRFDNRRKFTYDRSVGTNLILKDPGSPSILIDPSSRSRFEQVYDDVDVGQCEIQWEDLVIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALAEFKREVLIMRQLRHPNIVLFMGAVTRPPNLSIVTEFLPRGSLYRIIHRPNCQIDESRRIKMALDVARGMNCLHTSNPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHSTFLSSKSTGGTPEWMAPEVLRNEPSNEKCDVYSFGIILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDTTVARIIWECWQTDPNLRPSFAQLANILKPLQRLVMPLHSDQPSSSVLQEISVNSTP 952
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7735507 7747783 + CmoCh10G011180.1 Cmo10g01118 390464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g01118 952 CDD STKc_MAP3K-like 677 923 - -
Cmo10g01118 952 MobiDBLite consensus disorder prediction 401 422 - -
Cmo10g01118 952 PRINTS Tyrosine kinase catalytic domain signature 745 758 IPR001245 GO:0004672|GO:0006468
Cmo10g01118 952 PRINTS Tyrosine kinase catalytic domain signature 784 802 IPR001245 GO:0004672|GO:0006468
Cmo10g01118 952 PRINTS Tyrosine kinase catalytic domain signature 831 841 IPR001245 GO:0004672|GO:0006468
Cmo10g01118 952 PRINTS Tyrosine kinase catalytic domain signature 850 872 IPR001245 GO:0004672|GO:0006468
Cmo10g01118 952 PRINTS Tyrosine kinase catalytic domain signature 894 916 IPR001245 GO:0004672|GO:0006468
Cmo10g01118 952 Pfam Ethylene-responsive protein kinase Le-CTR1 142 337 - -
Cmo10g01118 952 Gene3D Transferase(Phosphotransferase) domain 1 750 932 - -
Cmo10g01118 952 ProSiteProfiles Protein kinase domain profile. 671 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g01118 952 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 421 944 - -
Cmo10g01118 952 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 78 420 - -
Cmo10g01118 952 Pfam Protein tyrosine and serine/threonine kinase 672 922 IPR001245 GO:0004672|GO:0006468
Cmo10g01118 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Cmo10g01118 952 SMART serkin_6 671 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g01118 952 MobiDBLite consensus disorder prediction 513 567 - -
Cmo10g01118 952 MobiDBLite consensus disorder prediction 404 418 - -
Cmo10g01118 952 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524
Cmo10g01118 952 Gene3D Phosphorylase Kinase; domain 1 664 748 - -
Cmo10g01118 952 SUPERFAMILY Protein kinase-like (PK-like) 662 940 IPR011009 -
Cmo10g01118 952 MobiDBLite consensus disorder prediction 15 79 - -
Cmo10g01118 952 PANTHER SERINE-THREONINE PROTEIN KINASE 78 420 - -
Cmo10g01118 952 PANTHER SERINE-THREONINE PROTEIN KINASE 421 944 - -
Cmo10g01118 952 MobiDBLite consensus disorder prediction 1 79 - -
Cmo10g01118 952 MobiDBLite consensus disorder prediction 517 567 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g01244 Cmo-Chr8:7873002 Cmo10g01118 Cmo-Chr10:7735507 2.49E-113 dispersed
Cmo10g01118 Cmo-Chr10:7735507 Cmo11g01013 Cmo-Chr11:5497639 0 dispersed
Cmo17g00359 Cmo-Chr17:2204776 Cmo10g01118 Cmo-Chr10:7735507 1.11E-88 dispersed
Cmo10g01118 Cmo-Chr10:7735507 Cmo01g01773 Cmo-Chr1:13120602 2.94E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74634 PF07714 PK_Tyr_Ser-Thr 4.70E-63 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g01118 - - csv:101218274 1609.35