Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g01152 ATGGAGCTTCACAATTCAACACCGCCACCACCAAACCACCACATCCACACCCACAATGCTCTTCTCACCTCCAATTCCTTCCTCATCATCATCGCCTCCATCATCTTCATCGCCGTCCTCCTCGCCGTCCTCCTCCTCATCTCCATGCTCCACCGCCTCAAATTAGCTCGAGGCACCGCCGCCGCCACCGCCGCCGCACAATCCACCACATTCAACCCCCACATAGCTATCAATTTCGATTCAAACCCAGAATTTAAGGGGCGTGGGTACTTATATGGAGCCAATTCTGGGAGGATTTCTAAGTATAGAATCAGGGGAGTTCAGGTTTTCACTTACAAGGAAATGGAATTGGCTACTGATCATTTTAATGAAGCTAATGTGATTGGAAATGGAAGATTTGGGATTGTTTATAGAGGAGTTCTTGGAGATGGAGCTGTGGTTGCTATTATGATGATCCATAGAGATGGGAAGCAGAGGGAACGTGCGTTCAGAATGGAGGTGGATCTCCTAAGCCGCTTGCAGTCTCCATGTCTGGTGGAGTTGCTTGGCTACTGCGCTGACAAACACCATAGGCTTCTGATATTTGAATTTATGCACAACGGTACTCTTCATCATCATCTGCATAATCCGGACACTGAATCTCAGCCATTGGATTGGAATACTAGATTGACGATAGCCCTTGATTGTGCCAAGGCACTCGAGTTCCTCCACGAGCATGCCGTTCCATCTGTTATTCATAGAAACTTCAAGTCAACCAATGTTCTATTGGATCAAGATTTCCGAGCCAAGGTCTCCGATTTCGGCTCAGCCAAGATGGGTTCCGATAAGATCAATGGTCAAATATCTACACAAGTCCTCGGAACCACCGGATATCTAGCACCAGAGTATGCTTCAACAGGTAAACTTACAACAAAATCAGATGTATATAGCTATGGCGTTGTGCTACTAGAGCTTTTGACTGGTCGAGTGCCGGTCAATATCAAACGGCCACAGGGCGAGCACGTTCTTGTCTCGTGGGCTCTCCCAAGGCTGACTAATAGGGAAAAAGTAGAGAAAATTATAGATCCAGCAATTCAAGGGAAATACTCAAAAAAGGATTTAATTCAGGTAGCAGCCATTGCAGCCATGTGCGTGCAGCCTGAAGCCGACTACCGGCCTTTGATGACTGATGTCGTGCAGTCACTGGTTCCTCTAGTTAAGAACCGATCGGCATCGTAG 1218 47.21 MELHNSTPPPPNHHIHTHNALLTSNSFLIIIASIIFIAVLLAVLLLISMLHRLKLARGTAAATAAAQSTTFNPHIAINFDSNPEFKGRGYLYGANSGRISKYRIRGVQVFTYKEMELATDHFNEANVIGNGRFGIVYRGVLGDGAVVAIMMIHRDGKQRERAFRMEVDLLSRLQSPCLVELLGYCADKHHRLLIFEFMHNGTLHHHLHNPDTESQPLDWNTRLTIALDCAKALEFLHEHAVPSVIHRNFKSTNVLLDQDFRAKVSDFGSAKMGSDKINGQISTQVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVNIKRPQGEHVLVSWALPRLTNREKVEKIIDPAIQGKYSKKDLIQVAAIAAMCVQPEADYRPLMTDVVQSLVPLVKNRSAS 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9795572 9798895 - CmoCh10G011520.1 Cmo10g01152 390498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g01152 405 PANTHER OS01G0750732 PROTEIN 10 404 - -
Cmo10g01152 405 Pfam Protein tyrosine and serine/threonine kinase 126 395 IPR001245 GO:0004672|GO:0006468
Cmo10g01152 405 Gene3D Phosphorylase Kinase; domain 1 94 197 - -
Cmo10g01152 405 ProSiteProfiles Protein kinase domain profile. 122 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo10g01152 405 CDD STKc_IRAK 128 398 - -
Cmo10g01152 405 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 10 404 - -
Cmo10g01152 405 SUPERFAMILY Protein kinase-like (PK-like) 100 395 IPR011009 -
Cmo10g01152 405 Gene3D Transferase(Phosphotransferase) domain 1 198 405 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00589 Cmo-Chr8:3590391 Cmo10g01152 Cmo-Chr10:9795572 1.00E-89 dispersed
Cmo10g01152 Cmo-Chr10:9795572 Cmo11g01976 Cmo-Chr11:13587372 5.46E-143 dispersed
Cmo17g00857 Cmo-Chr17:7907165 Cmo10g01152 Cmo-Chr10:9795572 3.38E-91 dispersed
Cmo11g01155 Cmo-Chr11:6631235 Cmo10g01152 Cmo-Chr10:9795572 8.19E-52 transposed
Cmo10g01152 Cmo-Chr10:9795572 Cmo11g01154 Cmo-Chr11:6629912 4.20E-172 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74635 PF07714 PK_Tyr_Ser-Thr 4.00E-43 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g01152 - - csv:101210578 651.358