Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g01155 ATGGCAATTTCTCTCCCCTTTCTCAAATCCTCTGCTCTCTCTCTCACCATTCTCTCTGTTTTCATCTTCTTCCTCCTCTTCACTCCAAATCACTCGCCGGAATCCTCGTCCAGAAGGTCCCTAATCGCCGCCGGCGACTCCAATTCCAATGCGTCTTCGATCCCATATTGTTCCTCTCGTGAATCTCACTTCGATGGCCTCGTTAACTACTTGTATTTCCATTTCTGCGTCTTCGATCGAAACCCATTTCTCTCTGTTCCGTTTCTTATTCTCATTCTTCTCTTCCACTTCTACATCCTCATCAAAACCGCTCAGGATCACTTCTCCATTGTCACTTCCAAGCTCGCTTTTCACCTCAATTTGTCCCCGAGTATGGCTGCTGTGACGCTCTTGGCTTTGGGAAATGGCGCTCCTGATGTCTTTGCATCTGTTGCTGCCGTTCGTGGTGGGCATTATCGAACTGGATTCGGTGCAATTCTCTCTGCCGGCACGTTTGTTTCGGCTTTTGTGGTTGGATTTGTGGCCATTTATGCTGCTCCGTTTTCGGTGAATCCGGCACAGTTTGTGAGGGATGTGTTGTTTTATTTGACTGCAGCGTTGTTCTTGTTCTATGTGTATCTTAGTGCAGAGATTTTCTTGTGGCAAGCTGTTGGGTTTGTTGGATTCTATCTGTTCTTTGTTGGGCTGGTGTTTTGGATGGATTTGGGGAATGGGAAGGCTAAGAGTGGGGCTGATATGGGAGTGGCTAGAGAAGCTGAGGGTGAGTTGCATCAAGACTGTGAGATGGGAGAAGGCTACAGACATGTAGATGAAGGAAAAACCAATTCTGGCTTATGGGAAGCTCTTCGAGTGATCCCGAAAGCATGGGAGGCTCCGGTCGTGTTTCTTCTGAAGCTTACCATTCCCCAACCCGCACCTTCCGAATGGAGCAGATTCTTTACCTCAGCCAATATTTCTCTGTGTCCCATTGCTCTTCTGTATGCCTGTAACTCATTCATGTCTTTTAACCATCCCATTGCTTTCCTCTTACCGAATACGCATTTACCTCTTTGGTTCGTAGTACTCTTAGCAAGCTCCTCTCTTGCAATTCTGCACTTCATCACCGAAACCGAGCCCCCGAAAACTGAGAAAGTCCCTGTTGTGCTTGCAGCATTTGTTATGAGTGTATTTTGGATTTCGACCACCGCAGGTGAACTTCTGAACTGTCTTGCAGCTCTTGGAGTGCTTCTCAAACTCCCAGCAGCTCTACTTGGGCTTACTGTGCTTGCCTGGGGAAACTCAGTTGGGGATCTTGTTGCTGATGTTGCTCTTGCAAAAGCAGGCCAGCCCTTGCTGGCTATGGCTGGATGCTTTGCAGGACCGATGTTTAACATGCTTGTCGGGCTCGGAACGGCATTGGTTATACAAACAGCTAACAATTATCCAGAGGCCTATCAGCTTCAATTCCATATCGGAATCGTGATTGCGTTCGTGTTCCTACTTTTCAGCCTGATGGGTTCCTTGCTTGTAGTTATTTGGTGCAGATTTCGGGTGCCTCGGTTTTGGGGATTCTGCCTTGTTGTGCTCTACATTGTTTTCATGGCTACCAGTTTACTGATGGCTGAGTATTCTCCATGA 1617 47.5 MAISLPFLKSSALSLTILSVFIFFLLFTPNHSPESSSRRSLIAAGDSNSNASSIPYCSSRESHFDGLVNYLYFHFCVFDRNPFLSVPFLILILLFHFYILIKTAQDHFSIVTSKLAFHLNLSPSMAAVTLLALGNGAPDVFASVAAVRGGHYRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVNPAQFVRDVLFYLTAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGLVFWMDLGNGKAKSGADMGVAREAEGELHQDCEMGEGYRHVDEGKTNSGLWEALRVIPKAWEAPVVFLLKLTIPQPAPSEWSRFFTSANISLCPIALLYACNSFMSFNHPIAFLLPNTHLPLWFVVLLASSSLAILHFITETEPPKTEKVPVVLAAFVMSVFWISTTAGELLNCLAALGVLLKLPAALLGLTVLAWGNSVGDLVADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVIQTANNYPEAYQLQFHIGIVIAFVFLLFSLMGSLLVVIWCRFRVPRFWGFCLVVLYIVFMATSLLMAEYSP 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9892202 9897300 + CmoCh10G011550.1 Cmo10g01155 390501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g01155 538 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 284 534 - -
Cmo10g01155 538 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 11 240 - -
Cmo10g01155 538 Pfam Sodium/calcium exchanger protein 382 531 IPR004837 GO:0016021|GO:0055085
Cmo10g01155 538 Pfam Sodium/calcium exchanger protein 91 231 IPR004837 GO:0016021|GO:0055085
Cmo10g01155 538 Gene3D - 121 243 IPR044880 -
Cmo10g01155 538 Gene3D - 313 531 IPR044880 -
Cmo10g01155 538 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 11 240 - -
Cmo10g01155 538 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 284 534 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g01155 Cmo-Chr10:9892202 Cmo11g00751 Cmo-Chr11:3657769 8.35E-15 dispersed
Cmo10g01155 Cmo-Chr10:9892202 Cmo14g00537 Cmo-Chr14:2725485 2.60E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g01155 K13754 - csv:101209909 890.567