Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g01169 | ATGACACCCATTTTGAACTATGTTGTGTCCAAATGGCAAGCGTTGTCCACTTCTGATCATGCCTCTGTGGTTTCCATCAACTTATTTGTGGCACTTCTCTGTGCTTGTATTGTGATTGGGCATCTTCTGGAGGAGACTCGATGGATGAATGAGTCGATCACTGCACTCTTGATTGGTATGTTTGCTGGAATAGTCATTTTACTGGTCAGTCGTGGGAAAAGTTCGCATTTGTTGCTTTTCAGCGAAGATACATTCTTTATTTATCTTCTGCCACCGATTATATTCAATGCGGGGTTTCAGGTGAAAAAGAAGCAGTTCTTTGTCAACTTTATGACAATTATGCTGTTTGGTGCAATTGGTACATTAGTCTCGTGTTTCATCATCTCGTTAGGAGCTTTTCAGTTCTTTAAGAAAATGGATGTTGGATCACTGGATATTGCTGATATTTTAGCGATTGGAGCTATATTTGCCGCAACGGATTCTGTATGCACGCTTCAGATATTAAGCCAGGACGAAACCCCTCTACTCTACAGTCTCGTATTTGGGGAGGGCGTGGTCAATGACGCTACGTCTGTGGTGCTTTTCAATGCTATTCAAAGCATAGATCTCAGCAACATTGATGCAAGAGTTGCTATACATTTTCTTGGGAGCTTCTTTTATCTGTTTTCGACGAGCACTCTACTCGGAGTATTTGTTGGGCTGCTGAGTGCTTATATAATCAGAAAGTTATACTTTGGCAGGCACTCGACAGATCGTGAGGTCGCTCTTATGATACTCATGGCGTATCTTTCGTATATGCTGGCTGAATTACTAGATTTGAGTGGCATTCTCACAGTGTTCTTTTGTGGAATTGTAATGTCACATTATACCTGGCATAATGTGACTGAGAGCTCAAGAGTTACCACCAATCCGGGGACATCGGTTGCTGTGAGCGCAATGTTACTCGGCCTGGTTATGGTTGGAAGAGCTGCTTTTGTTTTTCCATTATCGTTTCTATCCAACTTAGCTAAAAAATCAGCAGACGAGAAAATTACGTTCAGGGAACAGGTTATCATTTGGTGGGCTGGTCTCATGAGAGGGGCTGTCTCCATTGCTCTAGCTTATCACCAGTTCACCAGAGCAGGGCACACTCAACTACGAGGGAATGCGATGATGATCACTAGTACCGTAACCGTTGTCCTCTTCAGCACGATGGTGTTTGGATTATTAACCAAGCCTCTTATTAAGTGTTTGATACCCCACCCGAAACTCACGACCAGCATGCTATCGGACCCTGCGACTCCAAAATCATTCTCGGTTCCGCTACTTGGAAGCGCACAAGATTCAGAGCTAGATCTTGACAGCCTCCATGTTCCTCGTCCAACGAGTATACGCGCATTCCTTGCAACTCCTACGCACACTGTGCATCGGTACTGGCGAAAGTTCGACGACGCCTTCATGCGTCCAATGTTTGGGGGTCGGGGTTTTGTTCCTTTTGTCCCAGGATCGCCAACCGAAAGGGGAGGGCATTGA | 1512 | 44.84 | MTPILNYVVSKWQALSTSDHASVVSINLFVALLCACIVIGHLLEETRWMNESITALLIGMFAGIVILLVSRGKSSHLLLFSEDTFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIGTLVSCFIISLGAFQFFKKMDVGSLDIADILAIGAIFAATDSVCTLQILSQDETPLLYSLVFGEGVVNDATSVVLFNAIQSIDLSNIDARVAIHFLGSFFYLFSTSTLLGVFVGLLSAYIIRKLYFGRHSTDREVALMILMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVTTNPGTSVAVSAMLLGLVMVGRAAFVFPLSFLSNLAKKSADEKITFREQVIIWWAGLMRGAVSIALAYHQFTRAGHTQLRGNAMMITSTVTVVLFSTMVFGLLTKPLIKCLIPHPKLTTSMLSDPATPKSFSVPLLGSAQDSELDLDSLHVPRPTSIRAFLATPTHTVHRYWRKFDDAFMRPMFGGRGFVPFVPGSPTERGGH | 503 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 10438999 | 10445386 | + | CmoCh10G011690.1 | Cmo10g01169 | 390515 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g01169 | 503 | PANTHER | SODIUM/HYDROGEN EXCHANGER 2 | 303 | 502 | - | - | |
Cmo10g01169 | 503 | PANTHER | SODIUM/HYDROGEN EXCHANGER 2 | 7 | 302 | - | - | |
Cmo10g01169 | 503 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 303 | 502 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cmo10g01169 | 503 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 7 | 302 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cmo10g01169 | 503 | PRINTS | Na+/H+ exchanger signature | 113 | 121 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cmo10g01169 | 503 | PRINTS | Na+/H+ exchanger signature | 153 | 163 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cmo10g01169 | 503 | PRINTS | Na+/H+ exchanger signature | 84 | 95 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cmo10g01169 | 503 | PRINTS | Na+/H+ exchanger signature | 98 | 112 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cmo10g01169 | 503 | Coils | Coil | 503 | 503 | - | - | |
Cmo10g01169 | 503 | Gene3D | - | 145 | 197 | - | - | |
Cmo10g01169 | 503 | Pfam | Sodium/hydrogen exchanger family | 308 | 409 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cmo10g01169 | 503 | Pfam | Sodium/hydrogen exchanger family | 29 | 297 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g01176 | Cmo-Chr8:7482903 | Cmo10g01169 | Cmo-Chr10:10438999 | 0 | dispersed | |
Cmo10g01169 | Cmo-Chr10:10438999 | Cmo11g01307 | Cmo-Chr11:8965531 | 0 | dispersed | |
Cmo10g01169 | Cmo-Chr10:10438999 | Cmo17g01105 | Cmo-Chr17:9077906 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g01169 | - | - | csv:101214934 | 877.856 |