Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g01194 ATGATGGCTGGAACTAATCAAATCAATCTCAACGAAGCTAGGATGGTGGTTCCACTGAATACCTGGGTTCTCATTTCCAACTTCAAGTTGGCTTATAATCTTCTTCGTCGGCCTGATGGGACCTTCAATCGCCATTTGGCAGAGTTTCTCGACCGGAAGGTCCCTGCAAATGCTAACCCTGTTGATGGGGCTTTCTCGTTTGATGTCATTATTGATCGTGCTACGAGCCTGCTTTGTCGAATTTATCGACCTGCCAAGGGAGGGGAGCCTCAGACTACTAGCATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTTGTTGTCCCTGTTATTGTTTTCTTTCATGGTGGAAGCTTTGCTCATTCGTCTGCTAATAGCGCTATCTATGATACGCTATGTCGTCGATTGGTTAGCCTTTGCAAGGCTGTTGTTATCTCTGTGAATTATAGGCGTGCTCCTGAAAATCGGTATCCATGTGCTTATGATGATGGATGGACTGCACTCAATTGGGTGAACTCAAGAACATGGCTTCGAAGTAAAGACTCGAAAAGCTATATCTATTTGGCTGGCGATAGTTCGGGTGGAAACATTGTACACCATGTTGCATCAAGAGCTGTGAAGTCGGGAATTGAAGTGTTTGGTAATATACTTCTTAATCCAATGTTTGGGGGACAGGAAAGAACGAAATCGGAGATTCGGTTGGATGGGAAGTATTTTGTGACCATTCGAGATAGAGATTGGTATTGGAGGGCCTTTCTCCCTGAGGGAGAAGATAGAGACCATCCAGCTTGTAATCCCTTCGGGCCGAGGGGCTATAGCCTTGAAGGAATCAAGTTCCCGAAGAGCCTTGTCGTGGTGGCTGGTTTAGATCTTGTCCAAGATTGGCAATTGGCTTATGCCAGAGGGCTGGAGAATGATGGCCAGGAGGTGAAACTTTTGTATCTTGAGCAGGCAACAATTGGCTTCTACTTATTACCGAATACCGCGCACTTCTATACTGTCATGGACGAGATAAGCAACTTCGTGAGTTCTGACTGTTAA 1041 45.63 MMAGTNQINLNEARMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGAFSFDVIIDRATSLLCRIYRPAKGGEPQTTSIVDLEKPVDSEVVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVISVNYRRAPENRYPCAYDDGWTALNWVNSRTWLRSKDSKSYIYLAGDSSGGNIVHHVASRAVKSGIEVFGNILLNPMFGGQERTKSEIRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGYSLEGIKFPKSLVVVAGLDLVQDWQLAYARGLENDGQEVKLLYLEQATIGFYLLPNTAHFYTVMDEISNFVSSDC 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10949613 10952300 + CmoCh10G011940.1 Cmo10g01194 390540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g01194 346 Pfam alpha/beta hydrolase fold 111 323 IPR013094 GO:0016787
Cmo10g01194 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787
Cmo10g01194 346 SUPERFAMILY alpha/beta-Hydrolases 59 342 IPR029058 -
Cmo10g01194 346 PANTHER ARYLACETAMIDE DEACETYLASE 4 343 - -
Cmo10g01194 346 PANTHER GIBBERELLIN RECEPTOR GID1C 4 343 - -
Cmo10g01194 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 186 198 IPR033140 -
Cmo10g01194 346 Gene3D alpha/beta hydrolase 1 344 IPR029058 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g01194 Cmo11g01145 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00369 Cmo-Chr8:2314082 Cmo10g01194 Cmo-Chr10:10949613 0 dispersed
Cmo10g01194 Cmo-Chr10:10949613 Cmo17g01116 Cmo-Chr17:9141584 0 dispersed
Cmo10g01194 Cmo-Chr10:10949613 Cmo11g01145 Cmo-Chr11:6512388 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g01194 K14493 - csv:101213253 649.047