Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo10g01196 | ATGGGTTGTGTTCTCATGATTATTATCTTCATGTCCATACCTTTTTCAACGCAGAACTCCCACATTTTGATTGCTAACTCACCATTGAATGCAGCAGAGAGCTTCGATGTTGAAGAGTTAGAGAGGGTTTCGGGGGAAGATGAGAGTCGAGGAAATGAGCCTTTCATTCTGGAGAGATTCAGAGCTCTACTTGGACTCAAGAGCTTACCATCGGATCTTTCGTTTTCGCCGTCGCCGTCGCCGTCGCCGTCTCCATCACCGGCAGCCATTGCTCCTTCCCCTGTTCATGTGGCAACTCATCGAGTGCACATTCATGAGCACTCCCACCCTCATCAGCTTCGCTTGCACAAGAGACGACCAGTATACAAACCTAAAAGAGAGGAAGATGCAAGAGAAGGAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCTGCAGGAGTCACCATTTTGATATGCTCTATTATTGCCTTTTGGGTCTGCAAGAAGTTCAAAACTCAGAGAGAGGAAGCCACGGAGAAGCTTTCTGTTAAGAGTGAAACAGTAGAGAAGTCAGCTAAACCAAATTCACCAAAATCACCAAAATCTGGCCTTGATCCGTTCGATCTCGGTATGCTTGGAATGGATGCTGAAGAAGAACAGACCCAATGTTCTGTAAGTGAAAAGGAGATATCTGTTCATAAAGAGGGGGAAAGGGGCCAAGAGATGTTAGATTCAGAATTTGATAATGTAAGTGTTTCTTCAACCAAGGAAATGATGTATGTTCATGAGGAAGATGATAGTAAATCAATACAATGCGTATCTGCTAAAGCTGATTCCTCATCTGGGGATAGAATTACTCCTGTTAAATCTTGTTCTTCTGATGATGAGGAATCATTCCATTCTTGTGGTGATTCCAATTTGTCGAATGCTCGCCTTTCAAATGCTTCAGAATCTTCTTCTGCTAATGTGATAACAAAATCTACTTGTTCAGTGCCAACTATGAACTTACCAAGTAAATTGGAAACAACACAATGTGATGATTCTAACAAACCATCAACTTCTGACCAGTCGCATATTACCCTTTCTCCTTGCAATCCAGAAAGCAAAATGCAGATGGTTTCCCTCTCTGTAGGTGGCCAAAAGAATGTCCCATCTATATCTCCGCCTCCGCCACCACCGCCGCCACCGCCGCCAATCACGGATCGCAGCTCTTTTTCCCTCTCTTCACCCTTTTCAACTGGATCTACTTCCTCATCTGCATTGTTAAGATCATCATCTCCAGCAATGTCAGATTCTTCTTCGTTATCTCAAATACCATGGAATGATCTGACATCACCTAATCCTGCTGCTAAACCTTCACTACCATCATCTTCTATCCCTCCACCCCCTTCTCCACCACCAAGTTTGAAAGCAAAGGCTTACTCTTTCAAAACTCCACCACCTCTTCCTTCCAAGCTCCCTCAATTCATGGCATTTGGAAAAGAGGGAAATTCGCGGCCCAAACTTAAGCCTCTCCACTGGGACAAAGTAAGAGCTGCACCAGATCGATCAATGGTTTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGACGAAGAAATGATTGAGTCACTATTTGGCTACAACCAACATGATTCAATGAAGAATGGTGATGCTAGCAACAAAAGCCCTTCTCCAACCAAGCATATACTAGAGGCAAAGAGACTTCAGAACCTAACCATTCTCTTAAAAGCCCTGAATCTCTCTACAGAACAAGTTTGTGAAGCCATAGAACAAGGGACGGGGATGCGTTTGAGACAACTTGAAGCACTGGTGAAGATGGTACCAACACAGGAAGAAGAGGCCAAATTGTTAAGCTATGAAGGAAACATCGGTGAATTGGGGTTTACAGAAAATTTTGTGATATCAATTCTGAAAATACCATTCGCCTTCCAACGAGTAGAAGCCATGCTTTACAGAGAAACTTTTGAAGATGAAGTGAATCATCTCCGGAATTCGTTTTCCATACTAGAGGAAGCCTGTAAGGAGCTAAAATCGAGCAGGCTCTTCCTGAAACTACTGGAAGCGGTGCTAAAAACAGGGAACCGAATGAACGTCGGAACAAGCAGAGGAGGCGCAAGAGCATTCAAACTAGACGCACTCCTAAAACTATCCGACGTCAAAGGAACCGACGGAAAAACCTCCCTACTCCACTTCGTAGTGCAAGAAATGATCCGATCAGAAGGAATCAGAGTGTCCGGTAGCATAATGGGGAAAATCAGCCAAAAAAACAAATCGAGAACAATAGAAGAAAGAGAGAACGATTACCGAAGAATGGGATTAGATCTGGTGTCCGGCCTGAGCACGGAATTGCACAACGTGAAGCGAGCGGCAACGATCGATCTGAAAGTTGTTGCAAGCTTGAGGGGGAATCTGAACGACGGAATGGCGAAACTGCAAAAACTGGTGGGGAAGGAGTTGAGCGTGGATGAAAGGAGCGGGAATTTCGTAGGCGCCATGAAGGGATTCATGAGCTACGTGAAGAAGACGATGGAGGAGGTGAGGAAGGACGAAGAAGGGGTGATGTCGAGCGTGAGGGAAATCACAGAGTACTTCCATGGAAATGTGAGCAAAGAGGAGACGAATCCGCTGAGGATATTTGTGATTGTGAGAGATTTTCTTGGAATGTTGGACAGTGTTTGTAAGAGCTTCAAGATTGGAAGTTCATAG | 2691 | 44.41 | MGCVLMIIIFMSIPFSTQNSHILIANSPLNAAESFDVEELERVSGEDESRGNEPFILERFRALLGLKSLPSDLSFSPSPSPSPSPSPAAIAPSPVHVATHRVHIHEHSHPHQLRLHKRRPVYKPKREEDAREGRVRKILVAVLVSAGVTILICSIIAFWVCKKFKTQREEATEKLSVKSETVEKSAKPNSPKSPKSGLDPFDLGMLGMDAEEEQTQCSVSEKEISVHKEGERGQEMLDSEFDNVSVSSTKEMMYVHEEDDSKSIQCVSAKADSSSGDRITPVKSCSSDDEESFHSCGDSNLSNARLSNASESSSANVITKSTCSVPTMNLPSKLETTQCDDSNKPSTSDQSHITLSPCNPESKMQMVSLSVGGQKNVPSISPPPPPPPPPPPITDRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLTSPNPAAKPSLPSSSIPPPPSPPPSLKAKAYSFKTPPPLPSKLPQFMAFGKEGNSRPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQHDSMKNGDASNKSPSPTKHILEAKRLQNLTILLKALNLSTEQVCEAIEQGTGMRLRQLEALVKMVPTQEEEAKLLSYEGNIGELGFTENFVISILKIPFAFQRVEAMLYRETFEDEVNHLRNSFSILEEACKELKSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEMIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSGLSTELHNVKRAATIDLKVVASLRGNLNDGMAKLQKLVGKELSVDERSGNFVGAMKGFMSYVKKTMEEVRKDEEGVMSSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDSVCKSFKIGSS | 896 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 11686100 | 11689844 | - | CmoCh10G011960.1 | Cmo10g01196 | 390542 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo10g01196 | 896 | SMART | it6_source | 486 | 896 | IPR015425 | - | |
Cmo10g01196 | 896 | MobiDBLite | consensus disorder prediction | 269 | 297 | - | - | |
Cmo10g01196 | 896 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 486 | 896 | IPR015425 | - | |
Cmo10g01196 | 896 | MobiDBLite | consensus disorder prediction | 396 | 446 | - | - | |
Cmo10g01196 | 896 | MobiDBLite | consensus disorder prediction | 325 | 377 | - | - | |
Cmo10g01196 | 896 | MobiDBLite | consensus disorder prediction | 325 | 471 | - | - | |
Cmo10g01196 | 896 | PANTHER | FORMIN-RELATED | 39 | 340 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Cmo10g01196 | 896 | PANTHER | FORMIN-RELATED | 379 | 892 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Cmo10g01196 | 896 | Pfam | Formin Homology 2 Domain | 488 | 884 | IPR015425 | - | |
Cmo10g01196 | 896 | MobiDBLite | consensus disorder prediction | 105 | 128 | - | - | |
Cmo10g01196 | 896 | PANTHER | FORMIN-LIKE PROTEIN | 39 | 340 | - | - | |
Cmo10g01196 | 896 | PANTHER | FORMIN-LIKE PROTEIN | 379 | 892 | - | - | |
Cmo10g01196 | 896 | MobiDBLite | consensus disorder prediction | 378 | 395 | - | - | |
Cmo10g01196 | 896 | MobiDBLite | consensus disorder prediction | 170 | 201 | - | - | |
Cmo10g01196 | 896 | MobiDBLite | consensus disorder prediction | 447 | 463 | - | - | |
Cmo10g01196 | 896 | Coils | Coil | 647 | 667 | - | - | |
Cmo10g01196 | 896 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 499 | 889 | - | - | |
Cmo10g01196 | 896 | Gene3D | Formin, FH2 domain | 483 | 892 | IPR042201 | - | |
Cmo10g01196 | 896 | MobiDBLite | consensus disorder prediction | 105 | 121 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo05g01128 | Cmo10g01196 | CCT | |
Cmo10g01196 | Cmo11g01174 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g01196 | Cmo-Chr10:11686100 | Cmo19g00201 | Cmo-Chr19:1313077 | 2.47E-102 | dispersed | |
Cmo10g01196 | Cmo-Chr10:11686100 | Cmo11g01174 | Cmo-Chr11:6781255 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo10g01196 | - | - | bhj:120070661 | 1357.04 |