Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g01202 ATGGTTAATCTATATAAAGCTCCGATTCCGACGAACAAAAGTCCTCCGACAACAACTCCGGCTTCAAGCTACATCTCGCAAATGGCTGGTAAAGCTCAAATTCCTACCAAGAATTCGGCGCTTATTTCTATGATTGCTGATGAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTTGACCTACGAAGAAAAACTAATTACCTTATAGTCGATTCAAAGACGACCGTCAAGCAAATCGAAGATGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATCAGTCAATATGTTGCAAACATGATTAGGTTTCTGGTAGATAGCTACAACAAACCAATTCCTGCAATATTGGAGATTCCATCCAAGGATCATCCATATGACCCTGCTCATGATTCGATTCTTTCGCGTGTAAAGAACCTGTTTTCTACCGAATCGGTGGCGTCTGGGAGGCGTTAA 474 41.77 MVNLYKAPIPTNKSPPTTTPASSYISQMAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR 157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11764975 11771192 + CmoCh10G012020.1 Cmo10g01202 390548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g01202 157 SUPERFAMILY AtpF-like 42 145 IPR036906 GO:0034220
Cmo10g01202 157 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 28 157 - -
Cmo10g01202 157 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 38 151 IPR005772 GO:0033180|GO:0046961|GO:1902600
Cmo10g01202 157 MobiDBLite consensus disorder prediction 1 21 - -
Cmo10g01202 157 Gene3D ATPase, V1 complex, subunit F 36 149 IPR036906 GO:0034220
Cmo10g01202 157 Pfam ATP synthase (F/14-kDa) subunit 42 143 IPR008218 GO:0034220|GO:0046961
Cmo10g01202 157 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 28 157 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02105 Cmo-Chr4:13376794 Cmo10g01202 Cmo-Chr10:11764975 1.62E-93 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g01202 K02151 - csv:101215239 251.521