Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo10g01271 ATGTTCAAGCCTTCGCTCCTTCTGTTTCTCTTAGCACTGTCTTTTACCAAATGGGTTCACGCCTTAAACCCCTACAATCTCTCTGATTCTTCTCTCTTCGACTCTTATGAAACTTCCTTTGCTGCTACCCTTACTCCTCTCATGGTTGGACTCACTCTCATTCAAGGAGCAGATACAAAACAAGCAGTCTGTTTGGATGGCACTTTGCCAGGATATCACCTGCATCGTGGATATGGGTCAGGAGCAAAAAGCTGGCTTCTTCAATTGGAGGGAGGTGGATGGTGTAACAATATCAGGAATTGTGTCTATCGGAAAACAACAAGGCGTGGCTCGTCAAAATTTATGGAGAAGCAGATACCATTTACAGGAATTCTGAGTAACAAAGCTGAAGAAAATCCTGATTTTTTTAATTGGAACAGAGTGAAGGTTCGTTACTGTGATGGCGCCTCTTTTACTGGGGATTCAGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGATGGCTGCTATGGAAGCATTGAAGGCCGAGGGAATGCGTTTTGCTGAACAGGCCTTGCTTTCTGGATGCTCTGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAGTTTCGAGACTTATTTCCACAAGCCACTAAAGTGAAATGTCTGAGTGATGCTGGATTATTCCTTGATGTGACTGATATATCTGGAGGCCACTACATTAGAAACTTATTTGGTGGTGTGGTGGGCTTGCAGGGAGCAGGAGTGAATCTGCCATCCTTCTGTATGAACCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAATTTAATTGCTGGAATCAAAACCCCACTGTTTCTAGTGAACGCAGCATACGATTCCTGGCAGCTACAATCTAGTATAGCTCCACCTTCTGTGGATCCGGCTGGGCAATGGCACGATTGTAGGCTGAATTATGCAAAATGTAGCCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGGATGCTGTTCGGGATTTCTCAAAATCTTCAGAAAATGGGTTATTTATTAATTCATGCTTTGCTCACTGCCAATCTGAGAGACAGGATACATGGTTCGGCGACAATTCTCCTGTCATCGGAAACAAGCCAATTGCTCTGGCCGTTGGAGATTGGTACTTCGACCGAGCAGCAGTGAAAGCAGTTGACTGCCCTTATCCTTGCGACACGACCTGCCACCATCTGGTTTTCAGAGCCGCTTAG 1245 44.82 MFKPSLLLFLLALSFTKWVHALNPYNLSDSSLFDSYETSFAATLTPLMVGLTLIQGADTKQAVCLDGTLPGYHLHRGYGSGAKSWLLQLEGGGWCNNIRNCVYRKTTRRGSSKFMEKQIPFTGILSNKAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWMAAMEALKAEGMRFAEQALLSGCSAGGLASILHCDEFRDLFPQATKVKCLSDAGLFLDVTDISGGHYIRNLFGGVVGLQGAGVNLPSFCMNHLDPTSCFFPQNLIAGIKTPLFLVNAAYDSWQLQSSIAPPSVDPAGQWHDCRLNYAKCSQPQIQFLQGFRNQMLDAVRDFSKSSENGLFINSCFAHCQSERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAVDCPYPCDTTCHHLVFRAA 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 13091989 13096325 - CmoCh10G012710.1 Cmo10g01271 390617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo10g01271 414 Pfam Pectinacetylesterase 46 391 IPR004963 GO:0016787
Cmo10g01271 414 PANTHER PECTIN ACETYLESTERASE 2 47 412 - -
Cmo10g01271 414 PANTHER NOTUM-RELATED 47 412 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g01271 Cmo-Chr10:13091989 Cmo11g01255 Cmo-Chr11:7951868 0 dispersed
Cmo10g01271 Cmo-Chr10:13091989 Cmo04g00635 Cmo-Chr4:3142756 1.95E-151 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo10g01271 K19882 - csv:101218273 788.104