Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00037 ATGGCCGCAACGAAGACGGATGTCGCCGCCAGCGCCGTCGACGACCGTGTCTTGTCCACCGCTCAGCAGATCGTCAAGAGCCTCAATACTCCTAAGGAGGTTCGTGAGGACATGCTCTTGATACTCTCCAGTTTTGATAATCGACTTTCCAGTATCAGTAGTTTGATCAACAGTGACGACTCGAAAACCAAGAACGACAGGTTGGACGCCGCGGAGAAGGTGATTCTTCGTTGGGATCCTAATTTCGATGTGTCGAGACGGTCGCTTAATTGGGAGGACTCGCCGGACGAGGCGGCTGAGTATTTATCGGCGGTGGATGATATACTCCGGCTAGTAGAAGACCTTTCAATTGGGTCCGAGTCGACTGAGTTCGTAGACCGGGCCGAAAACGCGATCCAAATGGCGATGTGTCGGCTCGAGAGCGAATTCCGCCATATCCTGATCCAGAGCACAGTCCCTCTCGACGCCGAGCGGCTCTACGGCTCGATCCGAAGAGTTCACCTCTCGTTTGCGTCCAATTACAGTGAAATTGACGATGAATTCGAGAACTTCAGCGAGGACAGTCGCAGTTCGGGGCGATTCCATGAGCGAGGTGGGACAATTGGAGAAGATTCTTGGGTTGATTTAATCCATCCTGATGCGGCTGTTGATCTATCGGAGATTGCGGACCGTATGATTCGTTCCGGCTACGAAAAGGAATGTGTTCAAGTCTACAGCACGGTTCGTCGCGATGCTTTGGACGAGTGCTTGGCGATTCTTGGCGTCGAACGGCTCAGCATTGAGGAGGTTCAGAAAAGTGACTGGAAATTTTTGGACGATAAGATGAAGAAATGGATTCAGGCCGTAAAAGTTACTGTCCGGGTGATTTTGGTCGGTGAGAAGAGGCTGTGTGATCAGATCTTTAATGGCGCCCATGAATCCAAGGAGATTTGCTTTAACGAAACAGCCAAAGGGTGTGTAATGCAGCTGTTGAATTTCGGTGAGGCAGTGGCTATTGGGAAGAGGTCACCGGAGAAGCTGTTTCGAATCTTAGATATGTATGATGCTTTGGCGGGTGTTTTGCCCGACTTGGAAGCCATGGTTTTCGATGAGTTTCTGATTAGTGAAGCGCATGAAGTGTTGTCTGGACTGGGAGAAGCAGCCACAGGGACATTTGCAGAGTTTGAGAAAGCCATCGAAAGCGAAAATTCGAAGAAAGCGATGCAAAACGCCGAGATTCACCCGCTTATTCGATATGTAATGAATTATGTGAGATTGCTGGTTGATTACAGTAAGACAATGAACTCTCTTCTGGAAGACGAGGAACGCAGTGTGAACGACAATGACGATGATCTGCAGCTGGAAAGCACGTCGCCTTTAGCTCGTAGATTGTTGATGTTGTTATCGTCTTTGGAATCCAATCTTGTGGATAAATCAAAACTTTACGAGGATGTTGGGATGCAGTTCATATTTCTAATGAACAACATACTGTATATAGTGAAAAAAGTGAAAGATTGTGAGCTTGCCCAGCTGCTGGGCAGTAACTGGCTTCGCAGGCATAGCGGCCAAATTCGCCAATATGAAACGAGTTACCTTAGAGCCTCTTGGAGCAAGGTCTTGTGTTGCTTAAAGGATGAAGGCATTGGTGGGAGCACGAGCAATGCTGCCTCCAAGACGGCTTTGAAGGAAAAGTTCAAGAACTTCAATGCTGGGTTTGAGGAGATATGCAGGGCTCAGACGTCTTGGAAGGTATCGGATGCTCAACTGCGCGATGAGCTGATAATATCCGTTTCGGAGAAGGTGATCCCGGCGTATCGCTCCTTCTTGGGAAGGTTTAGAAATCAATTAGAGAGCGGAAGGCATTCTGGGAAGTACATAAAGTACACGCCCGAAGACTTGGAGAACTCTCTATCGGATTTGTTTGAAGGATCACCTGCAGTTTCACATCACTTGCGAAGAAAGGGTACTTGA 1950 48.36 MAATKTDVAASAVDDRVLSTAQQIVKSLNTPKEVREDMLLILSSFDNRLSSISSLINSDDSKTKNDRLDAAEKVILRWDPNFDVSRRSLNWEDSPDEAAEYLSAVDDILRLVEDLSIGSESTEFVDRAENAIQMAMCRLESEFRHILIQSTVPLDAERLYGSIRRVHLSFASNYSEIDDEFENFSEDSRSSGRFHERGGTIGEDSWVDLIHPDAAVDLSEIADRMIRSGYEKECVQVYSTVRRDALDECLAILGVERLSIEEVQKSDWKFLDDKMKKWIQAVKVTVRVILVGEKRLCDQIFNGAHESKEICFNETAKGCVMQLLNFGEAVAIGKRSPEKLFRILDMYDALAGVLPDLEAMVFDEFLISEAHEVLSGLGEAATGTFAEFEKAIESENSKKAMQNAEIHPLIRYVMNYVRLLVDYSKTMNSLLEDEERSVNDNDDDLQLESTSPLARRLLMLLSSLESNLVDKSKLYEDVGMQFIFLMNNILYIVKKVKDCELAQLLGSNWLRRHSGQIRQYETSYLRASWSKVLCCLKDEGIGGSTSNAASKTALKEKFKNFNAGFEEICRAQTSWKVSDAQLRDELIISVSEKVIPAYRSFLGRFRNQLESGRHSGKYIKYTPEDLENSLSDLFEGSPAVSHHLRRKGT 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 157117 159066 + CmoCh11G000370.1 Cmo11g00037 390656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00037 649 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 50 648 - -
Cmo11g00037 649 PANTHER EXOCYST COMPLEX PROTEIN EXO70 50 648 IPR004140 GO:0000145|GO:0006887
Cmo11g00037 649 Pfam Exo70 exocyst complex subunit 276 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo11g00037 649 Gene3D Exocyst complex component Exo70 85 643 - -
Cmo11g00037 649 SUPERFAMILY Cullin repeat-like 66 635 IPR016159 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g00037 Cmo13g00835 CCT
Cmo10g00061 Cmo11g00037 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00037 Cmo-Chr11:157117 Cmo14g01223 Cmo-Chr14:10395134 4.42E-152 dispersed
Cmo10g00061 Cmo-Chr10:282379 Cmo11g00037 Cmo-Chr11:157117 0 wgd
Cmo11g00037 Cmo-Chr11:157117 Cmo13g00835 Cmo-Chr13:7754168 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00037 K07195 - csv:101205970 1093.18