Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00061 ATGGCATCCCCTTCCTCCAAACTCCTTCCCTTCTTCGCCCTTCTCCCCCTCCTCCTCCAAGTCTATGCCCGACCGAGCCTTGTTCTTTCAGATCTTAGAGCCTTTAATGTCATCAAGAATGACTTGGGCATTGACGCTCAACTCACCTCCTCCCCATGCGACCTCGCCGGTGTCTTCTGCGAGCGCCGGCTCTCCAACAATGGCACTTATGTGTTGAGGATCACCAGGCTCATTTTCAAGTCCGAAGGTCTCACCGGTTCTCTTTCTCCGGCTATTGGGCGACTGACGGAGTTGAAACAGCTTACGGTTTCTGACAACCACCTCGTTGGCCACGTACCTGCACAGATTGTTGACTGCCGGAAACTGGAAATTCTCCATCTCCAAAGCAACCAGTTTTCTGGCAAAGTTCCATCTGGGTTGTCCTCGTTGATTCGCCTTCGAGACATGGATCTTTCGTCCAATAAATTCTCGGGGAGTTTGGATTTCTTGAAGCATTTCCCCAACTTGGAAAGTCTTTCTATTGCCAATAATTACTTCACGGGGAAGATCCCAGCTTCAATTCGGTCTTTTCGCAATCTTCGAGTCTTCAACTTCTCTGGAAATCGCCTTCTCGAAAGCTCAGCCCCTGTCGTGAAAGGCGTCGAGCTCTACTCGGCAACCAGTGTCCTCAAGCGTTATAAGTTAGCTGAGAATTCCACTACGAAAGGTAAGCCCAGTGCCGCGGCCACAGAGCCAACTTCGAGTGCTCAAGCTCCATCTCCCGCAGCATCCCCTCATAAGCATCGGAAAAATAAAGCAGTAAAGGTATTAGGTTGGCTACTTGGATTGCTCGCAGGAGCAATTGCTGGAACTTTGTCAGGGTTGATCTTTTCTCTACTGTTTAAAATCATCATAGCAGTTATAAAAGGTGGAACCAAGAATTCGGGCCACTCAATCTATGCTCCTAAGCTAATAAAACGAGAAGATTTGGCTTTTCTAGAGAAAGACGATGTGCTTGCATCACTCGAGATGATTGGTAAAGGAGGGTGTGGAGAAGTTTACAAGGCCGAATTACCAGAAAAAAGCGGGAGAATGTTTGCGATAAAGAAGATAGCTCAACCCCCGAAGGAAGCGGCCGAGTTAGCTGACGAGGAAAGCAAGTTTATGAACAAGAAAATGCAACAGATCAAGTCAGAGATTAGAACTGTGGGTGAAATCCGGCATCGGAATCTTCTTCCTCTTGTAGCCCATGTACTCCGTCCCGACTGCCACTACCTTGTGTATGAATTGATGAAGAATGGCAGCTTGCAAGACATGTTGAATCAGGTTTCGGCAGGAGCGAAAGAACTAGATTGGCTTACTCGCCATAAGATCGCTCTCGGAGTGGCATCTGGGCTGGAGTATCTTCACATGAACCATACCCCACGAATTATTCACAGGGATCTGAAGCCTGCAAATGTTTTGCTCGACGACAACATGGAAGCTCGAATTGCTGATTTTGGGCTGGCAAAAGTAATGCCAGATGCTCAAACTCACATGACGGCTTCCAATGTTGCAGGTACCGTAGGATACATCGCACCAGAGTATCATCAGACCTTAAAGTTCACTGATAAGTGCGATATATACGCCTTTGGGGTTCTGCTAGGGGTCTTGGTGATTGGGAAACTTCCATCTGATGAGTTTTTCCGGGACACGGATGAGATGAGTTTGGTCAAGTGGATGAGGAATGTTATGACTTCGGATAATCCTAGGAGAGCCATTGATCCGAAGCTCCTGGGAAATGGCTGGGAGGAGCAAATGCTCTTGGCTCTCAAAATTGCTTGCTTTTGCACTATGGATAATCCAAAAGAGAGGCCTAACAGTAAGGATGTCAGATGCATGCTATTACAGATCAAGCATGATGTACCTGAAACTCCCTCTTCTCGGAACATCTAA 1914 47.39 MASPSSKLLPFFALLPLLLQVYARPSLVLSDLRAFNVIKNDLGIDAQLTSSPCDLAGVFCERRLSNNGTYVLRITRLIFKSEGLTGSLSPAIGRLTELKQLTVSDNHLVGHVPAQIVDCRKLEILHLQSNQFSGKVPSGLSSLIRLRDMDLSSNKFSGSLDFLKHFPNLESLSIANNYFTGKIPASIRSFRNLRVFNFSGNRLLESSAPVVKGVELYSATSVLKRYKLAENSTTKGKPSAAATEPTSSAQAPSPAASPHKHRKNKAVKVLGWLLGLLAGAIAGTLSGLIFSLLFKIIIAVIKGGTKNSGHSIYAPKLIKREDLAFLEKDDVLASLEMIGKGGCGEVYKAELPEKSGRMFAIKKIAQPPKEAAELADEESKFMNKKMQQIKSEIRTVGEIRHRNLLPLVAHVLRPDCHYLVYELMKNGSLQDMLNQVSAGAKELDWLTRHKIALGVASGLEYLHMNHTPRIIHRDLKPANVLLDDNMEARIADFGLAKVMPDAQTHMTASNVAGTVGYIAPEYHQTLKFTDKCDIYAFGVLLGVLVIGKLPSDEFFRDTDEMSLVKWMRNVMTSDNPRRAIDPKLLGNGWEEQMLLALKIACFCTMDNPKERPNSKDVRCMLLQIKHDVPETPSSRNI 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 290504 292417 - CmoCh11G000610.1 Cmo11g00061 390680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00061 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 8 626 - -
Cmo11g00061 637 Gene3D Transferase(Phosphotransferase) domain 1 428 634 - -
Cmo11g00061 637 SMART serkin_6 332 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g00061 637 SUPERFAMILY L domain-like 46 206 - -
Cmo11g00061 637 ProSiteProfiles Protein kinase domain profile. 332 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g00061 637 Gene3D Ribonuclease Inhibitor 162 242 IPR032675 -
Cmo11g00061 637 Gene3D Ribonuclease Inhibitor 36 161 IPR032675 -
Cmo11g00061 637 Gene3D Phosphorylase Kinase; domain 1 332 427 - -
Cmo11g00061 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Cmo11g00061 637 Pfam Leucine Rich Repeat 168 189 IPR001611 GO:0005515
Cmo11g00061 637 SUPERFAMILY Protein kinase-like (PK-like) 334 626 IPR011009 -
Cmo11g00061 637 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 626 - -
Cmo11g00061 637 MobiDBLite consensus disorder prediction 234 262 - -
Cmo11g00061 637 Pfam Protein kinase domain 335 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g00061 637 MobiDBLite consensus disorder prediction 234 254 - -
Cmo11g00061 637 Coils Coil 372 392 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00083 Cmo11g00061 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00061 Cmo-Chr11:290504 Cmo02g01759 Cmo-Chr2:10066921 4.58E-06 dispersed
Cmo10g00083 Cmo-Chr10:371698 Cmo11g00061 Cmo-Chr11:290504 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74638 PF00069 Pkinase 2.10E-42 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00061 - - cpep:111793199 1128.24