Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00118 ATGTTGGTCTTTTTAGTTCATTGTAATCTTCGGCAATACCACCGCTTCATCCCGTGTCTGTATGTCTTCTTGCCTCCTATGTCGTCGCAGAAAAGAAACCCAGATGATGGAGATGCTCCGGCGGATGGTGACAATCCCGATGATAAGCGTAGGAAGTTTAGTTTCTTTCGTGTGGTTCAGGATGCTTTGTTCTCGCAATCAATGCAAAAGTTATTGGAGCCACTCATACGTAAAGTGGTAAAGGAGGAGGTTGAATTGGCACTAAGAAAGCATATGACCAATGTGCAAAGGAATGATGAAAATGGAGGGAAAGAAATCTGTTCTTCCGAGCCAAGATGCTTTCAATTGAAGTTCATAACTGATATATCTCTCCCGGTATTTACTGGAGCTCGCATTGAAGGAAGAGATGGTTCAAACTTGAAGGTGGCTTTGATTGATACTCAAAGTGGGAAAATTGTTGACACTGAGCCACAATCCTCAGCCAAAGTGGAAATTGTAGTGCTGGAGGGTGATTTTGAGAGTGGAGTTGATAATTACACTATAGAAGAGTTTAAGAACAACATTGTTAGAGAAAGGGAAGGAAAGAAATCACTTCTTACAGGAGATACATTTGTGAACCTCAAAGATGGCATTGGTTTGTTGGGTGAGATTTCTTTCACTGATAATTCTAGCTGGACTAGAAGCCGTCGGTTCAGGCTGGGTGCAAGAATTTTAGACAACAATAATGAAACGAGAATACTAGAAGCGAAGACTGCATCATTTGTGGTCAGGGATCACCGTGGCGAATTGTACAAGAAGCACCATCCTCCATCTCTGCAAGATGAAGTATGGAGATTGCAGAAAATTAGCAAAGATGGAGCGTATCATAAGCGCCTGAGCCAAGAAAAAATCAAGACGGTGCAAGATTTCCTAAGTCAACTTTATGTACAACCTTCAAGGCTTCGTAATATTCTTGGTGGCATGCCTACCAAAATGTGGGAAGCTACAATTGAGCATGCGCAGACATGTGTGCTCAATAAGAAGATTTATGTGTACAAACCTCACGATTTGGAACCGAAAAGCGGAGTGGTCTTTAATGTTGTAGGACAAGTGATGGGGCTACTTTCAGATTACCAGTACGTTCCCATAGATAAGCTATCTGAAACTGAAAAGGCTGATGCTCACAACTTGGTTATCTCCGCATACGAACACTGGGAACAAGTTGATTCTATGGATGATGAAACTTCTCTTGTAGGTAGCTCTTCTCAGTTCCTTTACACCCCGAGCTCACCGATGGTGGACCATTCTTATGATGGTATCAAGTATTTGGCTTCTCCAAAATTTAGTGGCTTTGATTTCACACCATCCAATGCCTATTCTTCTGACATAATTTCATCGATGGGATCTATTGAGAATGTGAGTGGTTTGGACGATCATGCTTTGCAGGCTTTTGATTCCATGGTAGTAAGACATGATCAGATTCCATGTTCCCCAAACTATCCCAGCTCTTCCCTGATCTGTGATTCCGAGCCGCTAAATTCATCTTTCTTCGATGTGGATCATATGCAAGTTTTAGAGTCTGCTGGTTTCCAATGTAGCTCGATTTTAGAATCACGAGCTACTCCAAAAGGAGAAACAAACGCAGATTTGATTGATACAAAGGTGGTCGTGGAAAGGAAAAAATGGACCATGGTTGATACTGGAAAACACACTAATGTCCAGGTTAAAATGTGTGCGGTTATGACGAGAAGCTCGGGGTGGTACGTGCTATTTGGTATGGAGACGGGGCTATGCAGTTTTTTCTAG 1785 42.18 MLVFLVHCNLRQYHRFIPCLYVFLPPMSSQKRNPDDGDAPADGDNPDDKRRKFSFFRVVQDALFSQSMQKLLEPLIRKVVKEEVELALRKHMTNVQRNDENGGKEICSSEPRCFQLKFITDISLPVFTGARIEGRDGSNLKVALIDTQSGKIVDTEPQSSAKVEIVVLEGDFESGVDNYTIEEFKNNIVREREGKKSLLTGDTFVNLKDGIGLLGEISFTDNSSWTRSRRFRLGARILDNNNETRILEAKTASFVVRDHRGELYKKHHPPSLQDEVWRLQKISKDGAYHKRLSQEKIKTVQDFLSQLYVQPSRLRNILGGMPTKMWEATIEHAQTCVLNKKIYVYKPHDLEPKSGVVFNVVGQVMGLLSDYQYVPIDKLSETEKADAHNLVISAYEHWEQVDSMDDETSLVGSSSQFLYTPSSPMVDHSYDGIKYLASPKFSGFDFTPSNAYSSDIISSMGSIENVSGLDDHALQAFDSMVVRHDQIPCSPNYPSSSLICDSEPLNSSFFDVDHMQVLESAGFQCSSILESRATPKGETNADLIDTKVVVERKKWTMVDTGKHTNVQVKMCAVMTRSSGWYVLFGMETGLCSFF 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 611915 615892 - CmoCh11G001180.1 Cmo11g00118 390737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00118 594 Pfam Calmodulin binding protein central domain 271 336 IPR046830 -
Cmo11g00118 594 Pfam Calmodulin binding protein C-terminal domain 341 402 IPR046829 -
Cmo11g00118 594 PANTHER OS02G0177800 PROTEIN 30 560 IPR012416 GO:0005516
Cmo11g00118 594 PANTHER CALMODULIN-BINDING PROTEIN 60 A 30 560 - -
Cmo11g00118 594 Pfam Calmodulin binding protein-like N-terminal domain 114 259 IPR046831 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00154 Cmo11g00118 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00441 Cmo-Chr10:1996992 Cmo11g00118 Cmo-Chr11:611915 5.52E-107 dispersed
Cmo10g01235 Cmo-Chr10:12376985 Cmo11g00118 Cmo-Chr11:611915 2.25E-61 dispersed
Cmo11g00118 Cmo-Chr11:611915 Cmo11g00404 Cmo-Chr11:1990248 1.15E-106 dispersed
Cmo10g00156 Cmo-Chr10:710539 Cmo11g00118 Cmo-Chr11:611915 7.22E-17 transposed
Cmo10g00154 Cmo-Chr10:706974 Cmo11g00118 Cmo-Chr11:611915 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00118 - - csv:101211405 854.358