Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00119 ATGGCCTTCTTTCACTCTCCCGCTCTTCTTCTTCTACTTTTTCTATCTCTTCCATTCTCAGTTCAATCTCAGCTTTCTCTCGATTATTACCAGAAAACTTGCCCCGATTTTGCACAGATCGTTCATGACACTGTTGCTCGCAAGCACGCTACTAGCCCTGTCACCGCCGCTGCATCTATGCGCCTTTTGTTCAGCGATTGTTTGGTTGGAGGCTGCGATGGCTCTGTTCTTGTTTCATCCAATGTCTTCAACCACGCCGAGCGCGATGCTGAAATCAACCGCAATCTTCCTGGTGACGCCTTTGACGTCGTCACTCGAGCGAAGATCACCTTAGAGCTCTCCTGCCCTGGGATTGTCTCTTGCTCCGACGTGTTAGCGCAAGCGACTAGAGATCTCATCGCGGCTACAGGCGGACCATCGTACAAAGTTGAATTAGGGCGAAAAGATAGCCTCGTCTCGAAAGTTTCAGACGTGGAAGGCAACATTCCGAAACCGAATCAATCAATCGACGAGTTGATCAAGCTATACACAGCGAAAGGCTTCACGATTCAAGAAATGGTAGCGCTATATGGCGGACGCACGATCGGATTCTCAAATTGCAAGGAATTCAGCGACCGGCTCTTCAATTTCAGCAAAAACACACCAACAGATCCTGAGATTAATTCGAAATACGCGGAGGCGTTGAAGAAGTCCTGCGCCGATTACGAGAAGAATCCAGCGAGTTCGGCGTACAGCGACCCTGTAACGCCAGGGAAGTTCGACAACGTATACTACCAGAATCTGCTGAGAGGAATGGGACTGTTGGCGTCGGATCAGGCGCTGGTGAAGGATCCGAGAACAAGGAAATTCGTGGAGATGTATGCAGGAAACCAGGCATTATTCTTCAAGGATTTTGGAGAGGCGATGGAGAAGATGAGCGTTCGCGAGGTGAAAACTGGCGGGAAAGGAGAAGTGAGGACAAGATGCGATGCGTTTAATTCAATCAACCATTAG 993 49.24 MAFFHSPALLLLLFLSLPFSVQSQLSLDYYQKTCPDFAQIVHDTVARKHATSPVTAAASMRLLFSDCLVGGCDGSVLVSSNVFNHAERDAEINRNLPGDAFDVVTRAKITLELSCPGIVSCSDVLAQATRDLIAATGGPSYKVELGRKDSLVSKVSDVEGNIPKPNQSIDELIKLYTAKGFTIQEMVALYGGRTIGFSNCKEFSDRLFNFSKNTPTDPEINSKYAEALKKSCADYEKNPASSAYSDPVTPGKFDNVYYQNLLRGMGLLASDQALVKDPRTRKFVEMYAGNQALFFKDFGEAMEKMSVREVKTGGKGEVRTRCDAFNSINH 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 619758 620750 + CmoCh11G001190.1 Cmo11g00119 390738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00119 330 Pfam Peroxidase 48 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PANTHER - 7 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 Gene3D Peroxidase, domain 2 163 305 - -
Cmo11g00119 330 PANTHER PEROXIDASE 41 7 329 - -
Cmo11g00119 330 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 SUPERFAMILY Heme-dependent peroxidases 24 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo11g00119 330 Gene3D - 28 326 - -
Cmo11g00119 330 CDD secretory_peroxidase 24 325 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00119 Cmo-Chr11:619758 Cmo11g01084 Cmo-Chr11:6074289 8.90E-126 dispersed
Cmo11g00119 Cmo-Chr11:619758 Cmo11g00120 Cmo-Chr11:623106 0 tandem
Cmo11g00197 Cmo-Chr11:964110 Cmo11g00119 Cmo-Chr11:619758 9.20E-174 transposed
Cmo11g01203 Cmo-Chr11:7087447 Cmo11g00119 Cmo-Chr11:619758 0 transposed
Cmo10g00159 Cmo-Chr10:719459 Cmo11g00119 Cmo-Chr11:619758 0 wgd
Cmo11g00119 Cmo-Chr11:619758 Cmo13g00930 Cmo-Chr13:8182766 6.71E-153 wgd
Cmo11g00119 Cmo-Chr11:619758 Cmo14g00639 Cmo-Chr14:3216333 3.73E-130 wgd
Cmo11g00119 Cmo-Chr11:619758 Cmo18g00116 Cmo-Chr18:820299 1.36E-152 wgd
Cmo11g00119 Cmo-Chr11:619758 Cmo04g02855 Cmo-Chr4:20358428 1.02E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00119 K00430 - csv:101213178 526.554