Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00131 ATGGTGTATGCATCTACTCATAACAAGAACATGCACGCCCTTCTAACAGCCAAACTCACCAAATTGACTCTCCCTTCCTCTTCTTCTTCTCCTCCTCCTCCTCCTCCCCCTCCTCCTCCTTCTTCTTCATCCACGGCCGCCCTTCTTGACTTCGACTTCTCTGACGTATTCGGCCCCACAAATTCCTCTTTACCATCTTTCCCCGGGGACCCACAGCACAATGAACAACAACCAGCGGTCATTCATAACAGATCTCACTCATTTGTGGGTCCGTCTCCACGGTTAACTCCCCCGTCTTCCCTTTCTTTTTTCCGGGAAGTTAAATCACAGATCGAGGAGGAAGAAGATGACCTAGAAATCTCGACTGGCGATGGAGTTCAAAAGGAGAAGGGGGCGGATGAGAGCGAGAATGACGGTGGAGAAAATTCAGAGGGGAAGGTTGGAGTTGGGGATTTCGATATTCTTCGAGTTGTGGGAAAAGGGGCGTTTGGGAAGGTCTTTCTAGTGAGGAAGAAAGGGGATTCGAAAGGAAACGGTCCCAATAATGATGGGATTTACGCCATGAAAGTGATGAGAAAGGATACCATTATAAAGAAGAATCATGTGGATTATATGAAGGCTGAGAGAGATATTCTCACAAAAGTTTCGCACCCTTTCATTGTTCAACTCCGCTACTCTTTCCAGTCCAAATCAAAACTCTATTTGATTCTTGATTTCATAAATGGGGGGCATCTGTTCTTCCATCTGTACCGGCAGGGGATCTTTAGTGAGGATCAGGCAAGGGTCTATGCTGCTGAGATCGTGTCAGCTGTTTCGCATCTTCATGACTGCGGCATTGTGCACCGGGATCTCAAGCCTGAGAACATTCTTATGGATGCTGATGGCCATGTTGTCCTTACGGATTTTGGACTGGCAAAGGAAATTGATGAATCGAGTCGGTCGAATTCGTTGTGTGGAACAACAGAATACATGGCTCCGGAAATCTTGCTTTCTAAAGGTCACAACAAGGATGCTGATTGGTGGAGCGTCGGAGTTCTTTTGTATGAGATGCTTAGTGGCAAGGTACGTGAATGGCAACCACCATTCACACACGCTAATAGAAAGAAGCTTCAAGAGAGAATAATCAAAGAGAAAGTGAAACTTCCATCATACCTGAGCACTGAAGCTCACTCTTTGCTCAGAGGGCTATTACAAAAGGATCCTTCTAAAAGATTGGGAAGTGGACCCAACAGAGGGGCGGACATAAAAAATCACAAATGGTTTCGACCTGTGAACTGGAAGAAATTGGAATGTAGGGAGCTGCAACCAAAATTCAAGCCGGATGTCAAGGGAAATGACTGCACAGCAAATTTTGATAATTGTTGGACGACGATGCCCCCCGACGACTCGCCAGCTCCAACGCCAACCGACGGAGGACACTTCCACGGATACTCGTATGTTGCTCCAGACCCTTGGCTTTCATCATCTGGATAG 1473 46.78 MVYASTHNKNMHALLTAKLTKLTLPSSSSSPPPPPPPPPPSSSSTAALLDFDFSDVFGPTNSSLPSFPGDPQHNEQQPAVIHNRSHSFVGPSPRLTPPSSLSFFREVKSQIEEEEDDLEISTGDGVQKEKGADESENDGGENSEGKVGVGDFDILRVVGKGAFGKVFLVRKKGDSKGNGPNNDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVSHPFIVQLRYSFQSKSKLYLILDFINGGHLFFHLYRQGIFSEDQARVYAAEIVSAVSHLHDCGIVHRDLKPENILMDADGHVVLTDFGLAKEIDESSRSNSLCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLSGKVREWQPPFTHANRKKLQERIIKEKVKLPSYLSTEAHSLLRGLLQKDPSKRLGSGPNRGADIKNHKWFRPVNWKKLECRELQPKFKPDVKGNDCTANFDNCWTTMPPDDSPAPTPTDGGHFHGYSYVAPDPWLSSSG 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 656883 659897 - CmoCh11G001310.1 Cmo11g00131 390750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00131 490 MobiDBLite consensus disorder prediction 111 146 - -
Cmo11g00131 490 MobiDBLite consensus disorder prediction 1 77 - -
Cmo11g00131 490 SMART serkin_6 152 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g00131 490 MobiDBLite consensus disorder prediction 121 141 - -
Cmo11g00131 490 SMART pkinase_C_6 422 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cmo11g00131 490 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 7 488 - -
Cmo11g00131 490 PANTHER RIBOSOMAL PROTEIN S6 KINASE 7 488 - -
Cmo11g00131 490 MobiDBLite consensus disorder prediction 56 77 - -
Cmo11g00131 490 Gene3D Transferase(Phosphotransferase) domain 1 240 440 - -
Cmo11g00131 490 Pfam Protein kinase domain 153 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g00131 490 MobiDBLite consensus disorder prediction 27 43 - -
Cmo11g00131 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Cmo11g00131 490 Pfam Protein kinase C terminal domain 442 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Cmo11g00131 490 CDD STKc_AGC 158 421 IPR045270 GO:0004674|GO:0005524
Cmo11g00131 490 ProSiteProfiles Protein kinase domain profile. 152 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo11g00131 490 SUPERFAMILY Protein kinase-like (PK-like) 149 478 IPR011009 -
Cmo11g00131 490 ProSiteProfiles AGC-kinase C-terminal domain profile. 422 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cmo11g00131 490 Gene3D Phosphorylase Kinase; domain 1 151 463 - -
Cmo11g00131 490 ProSitePatterns Protein kinases ATP-binding region signature. 158 189 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01480 Cmo-Chr4:7585406 Cmo11g00131 Cmo-Chr11:656883 5.31E-61 dispersed
Cmo11g00131 Cmo-Chr11:656883 Cmo15g01451 Cmo-Chr15:9842541 1.82E-66 dispersed
Cmo10g00172 Cmo-Chr10:774296 Cmo11g00131 Cmo-Chr11:656883 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74641 PF00069 Pkinase 2.70E-69 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00131 K04688 - csv:101214867 769.229