Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00139 ATGGAGATTTCCGGTTTCAATAACAAATGGGTATCAACAGTAGCCAGCGTATGGATTCAGTGCACCAGTGGGTCTCTCTACACCTTCTCCATCTACTCGCAAACCCTCAAGTCAACTCAGGGTTACGATCAGTCCACTTTGGATATCGTTTCTGTCTTCAAAGACATCGGTGTCAATTGCGGCGTCCTCGCGGGCTTTCTCTACTACTATGCCACCGCTGATGGTGGTGGTAGTCGGCCGTGGATTGTTCATTTAGCCGGTGCAATTCAGTGCTTCTTGGGTTATTTCCTTATGTGGGCTGCCGTTGCTGGCGTCTTTCCTCGCCCGCCGCTTCCCGCTATGTGCTTTTTCATGTTGGTGGCTGCTCATGCTCAAAGCTTCTTCAACACGGCTAACGTTGTAACTGGCGTTCGGAATTTCCCCAGTTATAGTGGGACGATTGTCGGAATCATGAAGGGGTTTCTTGGTTTGAGTGGAGCAATATTGATTCAAGTATACGAGACAATATTTAATGAACAACCTACTTCGTTTCTTCTAATGCTGGCACTGCTTCCGACCCTTAATTCCTTATTGTTCATGTGGTTTGTGAGAATTCACAATGCAGACGATGAAGTTGATAAAAAGCATCTAAATTCCCTATCCATAGTTACTCTGTTCCTTGCTACTTACCTTATGCTCAAGATAGTTCTAGAGCATATTTTCACTTTCCAGTTCCCTCTACAAGTTGCTTCATTTATTCTACTTTTGATATTGCTTGCTTCTCCTCTATATGTTGCAATTAGAGCCCAGCAGAGAGAATCCAGAAAGATTTTGCACCCTTCTGTTACTGAGAGTGATCAGCTGATTAGTCGCTCCAATCAAGAGAGCGAGGATTTCGACAATGAACGGAGAAGGGAGTCTGAAGAAAGCCTGAACCTCTTTCAAGCTTTATACACCATAGACTTCTGGATATTATTTTTTGCAACAGCTTGTGGCATGGGAACAGGGTTAGCCACAGTGAATAATATCAGCCAGATAGGATTATCTCTTGGTTACACAAGCTTGGAGACAACTATTTTGGTTTCCCTGTGGAGCATCTGGAATTTTTTTGGTCGTTTAGGAGCTGGATATGTATCGGATTATTTTCTCCATGCCAAAGGGTGGGCTAGGCCATTATTCATGTTCATCACTCTGGCAACCATGAGCATTGGACATGTAGTGATTGCCTCTGGTCTGCCTGGTGCTCTTTTCGCTGGTTCGGTGCTAGTGGGTGTTTGTTATGGGTCTCAATGGTCATTAATGCCAACAATTACCTCTGAAATATTTGGTGTTGTACACATGGGTACTATATTCAATGCCATTACAATAGCAAGCCCTGTTGGATCTTATATATTTTCAGTTAGAGTTATTGGGTATATGTATGACAAAGAAGCATCAGGTGAAGGAGGTACTTGTACTGGAACTTACTGCTTCATGTTATCATTTCTGATTATGGCTTTTGCCACCCTTTTGGGCTCTTTGGCAGCCCTTGGCTTATTTTTCCGGAGAAGAAGTTTCTACGATCAAGTTGTTTTTAGAAGGCTGCAACACTCATCGAGTGGATAA 1584 43.37 MEISGFNNKWVSTVASVWIQCTSGSLYTFSIYSQTLKSTQGYDQSTLDIVSVFKDIGVNCGVLAGFLYYYATADGGGSRPWIVHLAGAIQCFLGYFLMWAAVAGVFPRPPLPAMCFFMLVAAHAQSFFNTANVVTGVRNFPSYSGTIVGIMKGFLGLSGAILIQVYETIFNEQPTSFLLMLALLPTLNSLLFMWFVRIHNADDEVDKKHLNSLSIVTLFLATYLMLKIVLEHIFTFQFPLQVASFILLLILLASPLYVAIRAQQRESRKILHPSVTESDQLISRSNQESEDFDNERRRESEESLNLFQALYTIDFWILFFATACGMGTGLATVNNISQIGLSLGYTSLETTILVSLWSIWNFFGRLGAGYVSDYFLHAKGWARPLFMFITLATMSIGHVVIASGLPGALFAGSVLVGVCYGSQWSLMPTITSEIFGVVHMGTIFNAITIASPVGSYIFSVRVIGYMYDKEASGEGGTCTGTYCFMLSFLIMAFATLLGSLAALGLFFRRRSFYDQVVFRRLQHSSSG 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 703049 705070 - CmoCh11G001390.1 Cmo11g00139 390758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00139 527 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 524 - -
Cmo11g00139 527 CDD MFS_Mch1p_like 9 494 - -
Cmo11g00139 527 Gene3D MFS general substrate transporter like domains 210 510 IPR036259 -
Cmo11g00139 527 Pfam Nodulin-like 9 260 IPR010658 -
Cmo11g00139 527 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 6 524 - -
Cmo11g00139 527 SUPERFAMILY MFS general substrate transporter 8 201 IPR036259 -
Cmo11g00139 527 SUPERFAMILY MFS general substrate transporter 215 510 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00139 Cmo-Chr11:703049 Cmo11g00141 Cmo-Chr11:708639 2.90E-65 dispersed
Cmo11g00139 Cmo-Chr11:703049 Cmo11g00140 Cmo-Chr11:705347 0 tandem
Cmo10g00183 Cmo-Chr10:832059 Cmo11g00139 Cmo-Chr11:703049 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00139 - - csv:101216552 908.672