Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00140 ATGGATTGCTACGGTTGCCAGCATTTGGATCCAAGCATTTGCGGTCCTTCCTACACCTTCGGCATTTACTCCTCCGCCCTCAAATCATCTCAAAACTACGATCAATCCACTCTCGACACTGTCTCCGTCTTCAAGGACATCGGCGCCACCGCCGGAGTTCTTGCCGGCTTACTCTACTCCGCTGTCGTCTCCACGGATCGCCCCCGTCGCCCATGGATCGTCCTCTCCGTCGGAGCAATTCAGTGCTTCCTTGGTTATATTTTCATTTGGGCTGCCGTCTCTGGTTTAATCCCTCGGCCGCCGGTGTCGGCTATGTGTTTGTTCATGTTCTTAGCCGTCCATGCCCAAGTCTTCTTCAACACGGCAAATGTCGTCACTGGCGTTCATAACTTCCAGCTCTACGGCGGCACCATCATCGGCATTCTAAAGGGATTTCTGGGTCTAAGTGGAGCAGTTCTGATCCAATTCTCTAACACATTCTACAGCGGAGACCCAATAAGTTATCTTCTGATGCTGGCGATTTTACCGGCGCTCACGACTGTTCTGCTCATGAGATTCGTCGTAATCGAAAAAACAGAGATCGGTAACGAATCGACCCATTTGAACTCTCTCTCAAAAATTGCTCTTATAATCTCTTGTTATCTCACAATTCTCATCATTTTGGACAACGTTTTCTTTTTACCAACATGGGTTCGCTTATTCACCTTCGTTCTACTCCTCATCCTTCTCGCTTCCCCTCTCGGAATCGCAAACAGAGCACAAACAGAGGACTCTGTTTCCAAAACCAAGCTTCAAAGCACAGACAATTCCGTTGAATATCATCAAATTCCCGGTGAAGAACAGAGAAATGATCAGCTAATGATGGTTACAAATGGAGAAATGAACGTAATCGAAGCAATTGGCACGGTGAATTTCTGGCTATTGTTTTCTGCGATGATGTGCGGAATGGGTTCTGGGTTAGCCACCATAAACAACATGAACCAACTGGGCCAGTCTTTGGGCTACAAAACAGTCGAAATCCACACATTCGTTTCACTGTGGAGCATTTGGAATTTCCTTGGGCGGTTGGGATCCGGCTATGCCTCTGATCTTCTCCTCCGGGAATTAGGCTGGGCGAGGCCATTGTTAATGGCCGTCGCCTTGCTGACGATGAGCGTCGGCCATATCATCATAGCTTCAGGCTTCTCCGGGAATTTGTACTTGGGTTCGGTGATTGTGGGGATTTGTTACGGCTCGCAATGGTCGCTAATGCCGGCAATTACGGCGGAGATTTTTGGAATAAGGCATATGGGTACCATTTACAATACGATCACAGTAGCCAGTCCGATTGGATCTTATGTTTTGTCTGTTAGAGTTATTGGGTATATTTACGACAGAGAAGCCTCTGCCGGAGACAACTCCTGCTCCGGCAAACACTGCTTTATGACGTCTTTTCTGATCATGGCAGCGGTGGCATTCTTGGGTTTTATTGTTGCTGTTGCTCTGTTCCTTCGGACCAGGAGATTCTATCAACTTCTTGTGCAGAGACAGCTCAAGGATTAG 1542 47.8 MDCYGCQHLDPSICGPSYTFGIYSSALKSSQNYDQSTLDTVSVFKDIGATAGVLAGLLYSAVVSTDRPRRPWIVLSVGAIQCFLGYIFIWAAVSGLIPRPPVSAMCLFMFLAVHAQVFFNTANVVTGVHNFQLYGGTIIGILKGFLGLSGAVLIQFSNTFYSGDPISYLLMLAILPALTTVLLMRFVVIEKTEIGNESTHLNSLSKIALIISCYLTILIILDNVFFLPTWVRLFTFVLLLILLASPLGIANRAQTEDSVSKTKLQSTDNSVEYHQIPGEEQRNDQLMMVTNGEMNVIEAIGTVNFWLLFSAMMCGMGSGLATINNMNQLGQSLGYKTVEIHTFVSLWSIWNFLGRLGSGYASDLLLRELGWARPLLMAVALLTMSVGHIIIASGFSGNLYLGSVIVGICYGSQWSLMPAITAEIFGIRHMGTIYNTITVASPIGSYVLSVRVIGYIYDREASAGDNSCSGKHCFMTSFLIMAAVAFLGFIVAVALFLRTRRFYQLLVQRQLKD 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 705347 706955 - CmoCh11G001400.1 Cmo11g00140 390759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00140 513 Pfam Nodulin-like 12 249 IPR010658 -
Cmo11g00140 513 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 512 - -
Cmo11g00140 513 CDD MFS_Mch1p_like 12 488 - -
Cmo11g00140 513 SUPERFAMILY MFS general substrate transporter 230 501 IPR036259 -
Cmo11g00140 513 PANTHER F25A4.25 PROTEIN 13 512 - -
Cmo11g00140 513 Gene3D MFS general substrate transporter like domains 296 504 IPR036259 -
Cmo11g00140 513 Pfam Major Facilitator Superfamily 307 500 IPR011701 GO:0022857|GO:0055085
Cmo11g00140 513 ProSiteProfiles Major facilitator superfamily (MFS) profile. 303 513 IPR020846 GO:0022857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00183 Cmo11g00140 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g00140 Cmo-Chr11:705347 Cmo06g00393 Cmo-Chr6:1920809 8.59E-106 dispersed
Cmo11g00139 Cmo-Chr11:703049 Cmo11g00140 Cmo-Chr11:705347 0 tandem
Cmo11g00140 Cmo-Chr11:705347 Cmo11g00141 Cmo-Chr11:708639 7.89E-62 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00140 - - csv:101216789 668.307