Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo11g00141 ATGGAAGTGATAGGGTTTATGACCAACAAATGGGTTGCAACGGCCATCGGGATTTGGATCCAGTGCATCTGCGGTGCTTCCTACACTTTCAGCATCTATTCTTCGGCTCTCAAATCCACCCAGGGCTACGATCAGTCCACCCTCGATACCGTTTCCGTTTTCAAGGACATCGGCGCCAACGCCGGCGTCATTTCTGGTTTTCTTTACTCTGCCGTTACTCCCACCACCCGTCGACGTAGCTCCGCTGGCCCATGGGTGGTTCACGCGGCGGGAGCGATTCAATGCTTCCTCGGATATATTTTCATCTGGGCGGCGGTCTCTGGATTCATCGATCGGCCACCGGTGCCTGCGATGTGCTTCTTCATGTTCCTGGCTGCTCATGCGCAAACGTTTTTCAATACGGCCAACGTAGTCACTGGCGTTCACAATTTTGCGCACCATAGCGGGACTATTGTGGGCATCATGAAGAAACTCCTAGATAGATCATGTAGGCCAAAGCTAAATCTTTGTCCTCGATTTACTGCTCTGTTCTTCTCTGCCATGATCTATTTTATAGGGATCACCATTTCAGTAGTTCCAAGGTTTTCATTTGAGAAATTAGTTGTTGTTGCATTATTGAATCTGAGGGCAGATTCAAAGCAGTTTCCCCTGATTTTGGATCTTGATTATGCTGGATATCTTGGTCTTAGTGGAGCACTGCTAATCCAAGTTTATAACACGGCGTGCAATGGAGAACCAAGCAATTTTCTCCTCATGTTGGCTGTTTTCCCCACACTTTTATCCATCACGTTCATGTGGTTTGTTAGAATTGATAGAACAGAGTCTAGAAATGAGATGAAGCATTTGAACTCACTGTCTGCACTTGCTGTGATAGTTGCTTTTTACCTAATGGTTGCCATAATTTTCAACAACACTTTCTCCCTTTCATCATGGACTCGTTTTGTTACATTCTCCATACTCTTGGTTCTCCTTGTTGCTCCTCTGGGAATCGCCATTAACGCTCAGAGGGAGGACCTTAGAATGTCATCTCCCTCATTTTTCACTGAAGAAAACCCTGTTCTTAACAAGCCCAAGTCAGCGAATGCAGAGGATTCTGTTGAATATCATGAGCTGCCCAGTGATGAGTTGCAGACAATGGCTGCTGCAAACTCCAGAGCTCCTCGAGCCATGAATGTCTTGGAAGCTTTACGCACTTTGAACTTCTGGCTTCTGTTTGTTGCCATGGTGTGTGGAATGGGTTCTGGATTGGCCACCATAAACAACATGAGCCAACTTGGCCAATCTCTTGGCTACACAGCAACAGAGACGAAAACATTTGTGTCCTTGTGGAGTATATGGAACTTTCTTGGACGTTTTGGAGCTGGTTACACCTCTGATTTTCTTCTACATTCATATGGCTGGGCGAGGCCATTGTTAATGGCCATCACTCTTCTGATAATGAGTGGTGGCCACATTGTAATCGCCTCTGGTTTATCTGGAAATCTGTACGTGGGTTCAATTCTTGTTGGCATATGCTACGGCTCACAGTGGTCGCTGATGCCCACAATCACTTCAGAGATATTTGGTTTAGAGCATATGGGAACTATTTTCAACACCATAGCCATAGCCAGCCCTCTGGGGTCTTACATTTTTTCTGTTCGGGTCATCGGTTACATTTACGACAGAGAAGCTGCCGAAAAACATGGCTCCTGCTCCGGCACACACTGTTTTGTGGTATCTTTTTTGGTCATGGCCATCGTGGCTTTCTTGGGCTCTCTTGTTGCTGCTGCTCTCTTCTTTCGAACTAGGAGATTTTACCGACTGGCTTTGCAAAGAAGAGTGGAACGTCTCAGTTAA 1836 46.19 MEVIGFMTNKWVATAIGIWIQCICGASYTFSIYSSALKSTQGYDQSTLDTVSVFKDIGANAGVISGFLYSAVTPTTRRRSSAGPWVVHAAGAIQCFLGYIFIWAAVSGFIDRPPVPAMCFFMFLAAHAQTFFNTANVVTGVHNFAHHSGTIVGIMKKLLDRSCRPKLNLCPRFTALFFSAMIYFIGITISVVPRFSFEKLVVVALLNLRADSKQFPLILDLDYAGYLGLSGALLIQVYNTACNGEPSNFLLMLAVFPTLLSITFMWFVRIDRTESRNEMKHLNSLSALAVIVAFYLMVAIIFNNTFSLSSWTRFVTFSILLVLLVAPLGIAINAQREDLRMSSPSFFTEENPVLNKPKSANAEDSVEYHELPSDELQTMAAANSRAPRAMNVLEALRTLNFWLLFVAMVCGMGSGLATINNMSQLGQSLGYTATETKTFVSLWSIWNFLGRFGAGYTSDFLLHSYGWARPLLMAITLLIMSGGHIVIASGLSGNLYVGSILVGICYGSQWSLMPTITSEIFGLEHMGTIFNTIAIASPLGSYIFSVRVIGYIYDREAAEKHGSCSGTHCFVVSFLVMAIVAFLGSLVAAALFFRTRRFYRLALQRRVERLS 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 708639 711129 - CmoCh11G001410.1 Cmo11g00141 390760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo11g00141 611 Gene3D MFS general substrate transporter like domains 346 592 IPR036259 -
Cmo11g00141 611 PANTHER F25A4.25 PROTEIN 7 159 - -
Cmo11g00141 611 Pfam Major Facilitator Superfamily 403 596 IPR011701 GO:0022857|GO:0055085
Cmo11g00141 611 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 159 - -
Cmo11g00141 611 SUPERFAMILY MFS general substrate transporter 255 597 IPR036259 -
Cmo11g00141 611 Pfam Nodulin-like 224 331 IPR010658 -
Cmo11g00141 611 Pfam Nodulin-like 10 158 IPR010658 -
Cmo11g00141 611 Coils Coil 600 611 - -
Cmo11g00141 611 CDD MFS_Mch1p_like 10 584 - -
Cmo11g00141 611 PANTHER F25A4.25 PROTEIN 224 609 - -
Cmo11g00141 611 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 224 609 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00183 Cmo-Chr10:832059 Cmo11g00141 Cmo-Chr11:708639 0 dispersed
Cmo11g00139 Cmo-Chr11:703049 Cmo11g00141 Cmo-Chr11:708639 2.90E-65 dispersed
Cmo11g00141 Cmo-Chr11:708639 Cmo04g01464 Cmo-Chr4:7489179 2.19E-83 dispersed
Cmo11g00140 Cmo-Chr11:705347 Cmo11g00141 Cmo-Chr11:708639 7.89E-62 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo11g00141 - - csv:101216789 663.685