Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo11g00142 | ATGGGGCCTAAGAAGAAAATCATTGATCCGCGTTCTAAACAATCTCCTGCTGCTCGTGGAGTTGTTGTGGATGTTCCAAGCTCAGCGAACGCAGCCGACCAGAATTCAATACCTGAAAAGGCTAGTAACCACAACCAAAGTAGGATCGAGCCGGTGCTTCTCAATGGACCGGATGGGTTGTCTTATTCCACAATTAAACTCGAATGCGAGCGGGCTCTTACCGCGCTTCGGCGCGGGAACCACACTAAGGCACTGAGGCTTATGAAGGAGTTGAGCTCCAGAAATGAGAACTCTGTTCACTCTGCATTGATTCATCGGGTTCAGGGTACTATTTGTGTAAAGGTAGCGTCGATTATTGATGACCTGAATACAAAGCAGCGGCATTTGAAGAATGCGATTGAGTCTGCTCGTAAAGCAGTCCAGCTCTCACCTAACTCTATCGAGTTTTCCCATTTCTATGCAAATTTGCTGTACGAGGTTGCAAATGATGCGAAGGAGTATGAGGAGGTGGTGCAGGAGTGTGAGCGGGCCCTTGGCATTGAAAATCCAATCGATCCCGCCAAGGAGAGTTTGCAGGATGAAAAGAGTCAGAAGATACCTACTGCAGAAGCACGGATTACACATGTTCAAACTGAATTGAGGCAGTTAATTCAAAAGTCAAATATATATTCGATATCATCTTGGATGAAGAACTTGGGTAACGGGGAGGAGAAGTTTAGGTTGATTCCGATAAGAAGAGTGACAGAGGATCCAATGGAGGTGAGGTTGGTTCAGGCTAGAAGGACAAATGAAATTAAGAAGGCAACCAAAACACCTGAGGAGAGAAGAAAGGAGATTGAAGTCCGTGTTGCTGCTGCAAGGCTTTTGCAACAGAAGTGTGAGACACCTCAAATTCAAAACGAAGAAGGTAAAGTTGATCGGTCCCTAGATTCATCTTTAGGATCTGGTACAAGAGCTGGCGAGCGACGGAAACATGGCAATTTACGGAAACAGGGATCTTCAGCTGAAAGGAGGGATTTGGTTCATTCTTTTTGGAATTCCATGAGTATAGAAGCAAAGAAAGATTTGCTTAAGATCAAGATAAGTAATCTTAAGGCGCATTTTAGTTCTTCAAAGGATGCTTCGGCGAATGAAGTTATTTCAGAAGCTTTGTCCTTTTATAATGCCAATAAAACATGGAAATTTTGGGTTTGCTGCAGATGTGATGAGAAATTTGTGGATTCGGATTCCCATATGCACCATGTGGTTCAAGAGCACATGGGTAACCTTTTACCAAAAATGCAATCAATTTTGCCCCAGAATGTTGATGATGAATGGACCAAAATGATTCTTAATTGCTCCTGGAAAGCATTGGATGTATCAGCTGCAGCTAAAATGCTCACCGCTGAAACAAAATGCAAAGATTCTGAGTTGGTTGTAGGTATCTTCCCACAGCATCATTCAGAATGTGATAACTATTTCAAAGATGCATGGGGTTCTTCTCCAGAGAAGCATAAATATGTGGATAGTTTAAATGAATGCCGTCTTTCTGAAAAAATTACCAACAACGGATCTAAGACCTATCTTGAAAACCAGGGTTCTGTGGCATCATATTCCTCATCTGACAGCTTTCCTGTATCTGATGATCCTGAGCGTACAAAGCTTCTTGAGAAAATTCATGCAGTATTTGAGTTGCTTATAAGACATAAATATCTTGCTGCTAGCCATTTAAACAAGGTTATACAATTTGCAATGGATGAGCTACAGGGTCTTGCTTCTGGATCTCATCTTCTAAACCAGGGTCTGGACCAAACACCACTATGTATTTGCTTTCTAGGTGCTTCTCAGCTTAGGAAAATCCTCAAGTTTTTGCAAGAATTATCTCAGTCTTGTGGTATTGGTAGATACTCTGATAAAAGTACTGGTCAAATTGAAGATTCAAAGAGTGATAAACAAGCGGTTGAAGTCAGAGAGAAAGTTGTTCTCAGTGAAGATGCGTCACTTCTCCTCCTGAATGAGTGTTTGCTGTCATCTGATATCACTCATGCTGATGTTCCGGTTGCAGCTGCAGATCATATGCTTGCTGCAACTGCCAAGGATGTTACTTCAAATGGGGTTCTTTCTGGTGTTGACCCCTTTCTTTCCTGGATATATGCAGGTCCCTCTAGTGGGGAACAGTTGGTCTCATGGGAAAAAACAAAGGAAGAAAAGATACAGCGACGAATGGAAATTTTTCAAATGCTTGAGAAGGAATTTTACCATCTGCAGAGTCTTTGTGAGAGAAAATGTGAGCATTTGAACTACGAGGAAGCGTTGCAGTCAGTGGAGGATCTCTGCCTTGAAGAGGGCAAGAAGAGGGAAGCTTTGAATGAATTTATCCCCAAGAGTTATGAGTCAGTCCTGAGGAAGCGAAGGGAGGAGCTTATTGAGGCTGAAAATGGTGTGCTGTTTATCAGCAGTAGGTTTGAGTTAGATGCTGTAACTAATGTTTTGAAAGAAGCAGAAACTCTGAATGTTAATCAATTTGGATACCAGGAAACTTTTGCCAGCGTGTCTCCACAGTTAGGAGATCTGGAATCTGGTGAAGATGAAGAACGGAGAGCTAAGGATTATTTGCATGAAGTTGATACTTGTATAGAAGTTGCAATACAGAGACAGAAGGAACAGTTATCTATTGAGATTAGCAAAATTGATGCCCGCATCATGCGAAATGTTACTGGAATGCAACAGTTGGAACTTAAGCTCGAACCTGTTTCTGCACATGATTATCAATCAATATTGTTGCCTCTTGTAAACTCATACTTGAGGGCACATTTAGAAGATTTGGCTGAAAAAGATGCCACAAAGAAGTCTGATGCTGCAAGCGAAGCATTTTTAGCTGAATTGGCACTGGATTCGAAGAAGGGTATCAGAGGAGGAACTGATAATTCAAGACATGCACATGAAAAACCAAAGGAAAAGAAAAAGAGCAAGGAGTTTAGGAAAGTCAAGGACTCTAAGGTGGTCAGTGGTCCTGAGCAGGATGTGCATCGTGGTCAGGCTGTCGATGGAGATCCCTTTCCAGTTTCATCTGATGGTGATGCTGCAGAGGTGGATATTGCTGTTTTTGAGAATGTTGATGCGTTAAGACTACAGGAGGAAGAGCTCAGACGCAAAATTGAGCTGGAAGCTGATGAAAGAAAGCTAGAAGAGACTTTGGAGTATCAAAGACGAATTGAGAATGAGGCTAAACAAAAGCATTTGGCTGAACTGCAAAAGAAATCTGCTCAGACAACGCATAATAATCTCGCTGGACTTGTCCCCAATGTTGAAGGTGCTGATAAACATTTCAAGCCTTCTGTGGTGGATAAATTGGCAGAAAATGATTTGGTTTCCGACTTGTCTAGGAATGGTCCTGCCATGCGAAATGCTTTGTCAGGTGTCTCCAATGTAGGAGTTCTAGAGAATAGTCTGCCGTCATCTGATAGGAAGAAGGGGAGGAAAGGTAGACGACACAAGGTTTCAATCAAACCAGTAGATGGAAATCAGCCTTCACCATCTGATAAGGATAACGTAGCCTTTGACAACCAATTGACTGAACAAGTTAGATATCATGGCAATCCCCTGCAAGATAGTGTTAATCCACTTCTTGAAGATAATAGTACAAAGACTTCGAGACAACATGTGGAGGATGAAGAGGAAAGATTTCAAGCTGATCTTAAGAAGGCTGTACGCCAGAGCCTTGATGCATTTCAAGAACAGCAGAAATTACCCTTGATTATGAGTTCCAGGACACCATTGATCAGTCATGGTGAAGTAGATAGTAATGGTCTTCCATCAAATGAACGCAATGTAGAAAATGTGCAGGCAGCTGGTATGTTTGGTACAGGACTTAAGAATGAAGTTGGTGAATATAATTGCTTTTTGAATGTGATTATTCAGTCATTATGGCATTTAAGACGGTTTCGAGAAGAGTTCCTGAGAAGATCTATGACTGAGCATGTTCATGTTGGGGATCCCTGTGTTGTTTGTGCATTATATGAAATTTTTGCTGCCTTGAACAAGGCATCTGCAGATTCTAGAAGAGAAGCAGTCGCCCCCACTTCTTTGAGAGTAGCTCTGAGCAATCTTTGTCCTGATAGTAATTTCTTCCAAGAGGGTCAGATGAATGATGCCTCTGAAGTTTTGGCAGTCATATTTGATTGCCTACACCAGTCATTGACTGCTAGTTCGAGTGTTTCTGATACAGACACAATAGAAAGCAATTGCATAGGGTCTTGGGACTGTTCAAGTGACACTTGTTTGGTACATTCCATCTTTGGAATGGACATTTTTGAACGAATGAATTGCTACAGTTGTGGCCTGGAATCTAGACATCTGAAGTACACTTCCTTCTTTCACAATATAAATGCTAGTGCTCTTCGGACAACGAAGGTTATGTGTTCAGAAAGCTCCTTCGATGAACTTCTGAATGTTGTTGAAATGAATCATCAGCTAGTATGTGATCAGGATGTTGGTGGATGTGGAAAACTCAATTACATTCATCACTTCCTTTCCGCACCACCACATGTATTCACAACAGTCTTGGGCTGGCAGAAAACTTGTGAGAGTGCTGATGACATCACAGAGACATTAGCTGCTCTAAGTACTGAGATAGATATCAGTGTTCTTTATCGGGGTCTAGATCCAAAGAATGTCCATAATTTGGTATCAGTGGTTTGCTACTATGGTCAACACTATCATTGTTTTGCGTACAGTTGTGACAAGAAATGCTGGATAATGTATGATGATAGAACCGTTAAGGTAATTGGTGGCTGGGCTGATGTTCTTACCATGTGTGAAAAAGGACACTTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAATTAG | 4848 | 41.73 | MGPKKKIIDPRSKQSPAARGVVVDVPSSANAADQNSIPEKASNHNQSRIEPVLLNGPDGLSYSTIKLECERALTALRRGNHTKALRLMKELSSRNENSVHSALIHRVQGTICVKVASIIDDLNTKQRHLKNAIESARKAVQLSPNSIEFSHFYANLLYEVANDAKEYEEVVQECERALGIENPIDPAKESLQDEKSQKIPTAEARITHVQTELRQLIQKSNIYSISSWMKNLGNGEEKFRLIPIRRVTEDPMEVRLVQARRTNEIKKATKTPEERRKEIEVRVAAARLLQQKCETPQIQNEEGKVDRSLDSSLGSGTRAGERRKHGNLRKQGSSAERRDLVHSFWNSMSIEAKKDLLKIKISNLKAHFSSSKDASANEVISEALSFYNANKTWKFWVCCRCDEKFVDSDSHMHHVVQEHMGNLLPKMQSILPQNVDDEWTKMILNCSWKALDVSAAAKMLTAETKCKDSELVVGIFPQHHSECDNYFKDAWGSSPEKHKYVDSLNECRLSEKITNNGSKTYLENQGSVASYSSSDSFPVSDDPERTKLLEKIHAVFELLIRHKYLAASHLNKVIQFAMDELQGLASGSHLLNQGLDQTPLCICFLGASQLRKILKFLQELSQSCGIGRYSDKSTGQIEDSKSDKQAVEVREKVVLSEDASLLLLNECLLSSDITHADVPVAAADHMLAATAKDVTSNGVLSGVDPFLSWIYAGPSSGEQLVSWEKTKEEKIQRRMEIFQMLEKEFYHLQSLCERKCEHLNYEEALQSVEDLCLEEGKKREALNEFIPKSYESVLRKRREELIEAENGVLFISSRFELDAVTNVLKEAETLNVNQFGYQETFASVSPQLGDLESGEDEERRAKDYLHEVDTCIEVAIQRQKEQLSIEISKIDARIMRNVTGMQQLELKLEPVSAHDYQSILLPLVNSYLRAHLEDLAEKDATKKSDAASEAFLAELALDSKKGIRGGTDNSRHAHEKPKEKKKSKEFRKVKDSKVVSGPEQDVHRGQAVDGDPFPVSSDGDAAEVDIAVFENVDALRLQEEELRRKIELEADERKLEETLEYQRRIENEAKQKHLAELQKKSAQTTHNNLAGLVPNVEGADKHFKPSVVDKLAENDLVSDLSRNGPAMRNALSGVSNVGVLENSLPSSDRKKGRKGRRHKVSIKPVDGNQPSPSDKDNVAFDNQLTEQVRYHGNPLQDSVNPLLEDNSTKTSRQHVEDEEERFQADLKKAVRQSLDAFQEQQKLPLIMSSRTPLISHGEVDSNGLPSNERNVENVQAAGMFGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYEIFAALNKASADSRREAVAPTSLRVALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLTASSSVSDTDTIESNCIGSWDCSSDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRTTKVMCSESSFDELLNVVEMNHQLVCDQDVGGCGKLNYIHHFLSAPPHVFTTVLGWQKTCESADDITETLAALSTEIDISVLYRGLDPKNVHNLVSVVCYYGQHYHCFAYSCDKKCWIMYDDRTVKVIGGWADVLTMCEKGHLQPQVLFFEAVN | 1615 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 711512 | 720384 | - | CmoCh11G001420.1 | Cmo11g00142 | 390761 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo11g00142 | 1615 | MobiDBLite | consensus disorder prediction | 297 | 335 | - | - | |
Cmo11g00142 | 1615 | PANTHER | UBIQUITIN SPECIFIC PROTEINASE | 1 | 1615 | - | - | |
Cmo11g00142 | 1615 | PANTHER | INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE | 1 | 1615 | - | - | |
Cmo11g00142 | 1615 | Coils | Coil | 1212 | 1232 | - | - | |
Cmo11g00142 | 1615 | MobiDBLite | consensus disorder prediction | 962 | 1015 | - | - | |
Cmo11g00142 | 1615 | Gene3D | Tetratricopeptide repeat domain | 62 | 202 | IPR011990 | GO:0005515 | |
Cmo11g00142 | 1615 | Pfam | Protein of unknown function (DUF627) | 71 | 181 | IPR006866 | - | |
Cmo11g00142 | 1615 | SUPERFAMILY | Cysteine proteinases | 1282 | 1612 | IPR038765 | - | |
Cmo11g00142 | 1615 | MobiDBLite | consensus disorder prediction | 317 | 335 | - | - | |
Cmo11g00142 | 1615 | Coils | Coil | 119 | 139 | - | - | |
Cmo11g00142 | 1615 | Coils | Coil | 1032 | 1068 | - | - | |
Cmo11g00142 | 1615 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Cmo11g00142 | 1615 | Gene3D | Cysteine proteinases | 1266 | 1613 | - | - | |
Cmo11g00142 | 1615 | MobiDBLite | consensus disorder prediction | 964 | 998 | - | - | |
Cmo11g00142 | 1615 | MobiDBLite | consensus disorder prediction | 28 | 50 | - | - | |
Cmo11g00142 | 1615 | ProSiteProfiles | Ubiquitin specific protease (USP) domain profile. | 1282 | 1614 | IPR028889 | - | |
Cmo11g00142 | 1615 | Pfam | Protein of unknown function (DUF629) | 341 | 874 | IPR006865 | - | |
Cmo11g00142 | 1615 | MobiDBLite | consensus disorder prediction | 1193 | 1215 | - | - | |
Cmo11g00142 | 1615 | MobiDBLite | consensus disorder prediction | 1139 | 1177 | - | - | |
Cmo11g00142 | 1615 | MobiDBLite | consensus disorder prediction | 1193 | 1208 | - | - | |
Cmo11g00142 | 1615 | CDD | Peptidase_C19 | 1374 | 1612 | - | - | |
Cmo11g00142 | 1615 | Pfam | Ubiquitin carboxyl-terminal hydrolase | 1283 | 1591 | IPR001394 | GO:0004843|GO:0016579 | |
Cmo11g00142 | 1615 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 398 | 419 | IPR013087 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo10g00186 | Cmo11g00142 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00186 | Cmo-Chr10:843391 | Cmo11g00142 | Cmo-Chr11:711512 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo11g00142 | - | - | mcha:111007268 | 2721.42 |